Contig 012806:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J13Sequence542012806 (3)dbj|BAA13440.1|1e-62calcium dependent protein kinase [Ipomoea batatas]683009954 (5)dbj|BAA13440.1|1e-84calcium dependent protein kinase [Ipomoea batatas]
JMFF031D22Sequence488012806 (3)dbj|BAA13440.1|5e-63calcium dependent protein kinase [Ipomoea batatas]786009954 (5)dbj|BAA13440.1|2e-117calcium dependent protein kinase [Ipomoea batatas]
JMSF052J10Sequence676012806 (3)dbj|BAA13440.1|1e-85calcium dependent protein kinase [Ipomoea batatas]906009954 (5)dbj|BAA13440.1|1e-148calcium dependent protein kinase [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF052J10+ CTCGGGCT
                      ____________________________________________________________
consensus CTCGGGCT
 
. : . : . : . : . : . :
JMSF052J10+ TCAAATCGCGGTGCATCACACCCATAAAATGGCAAGTATGAACAACATTGACTATAGACC
                      ____________________________________________________________
consensus TCAAATCGCGGTGCATCACACCCATAAAATGGCAAGTATGAACAACATTGACTATAGACC
 
. : . : . : . : . : . :
JMSF052J10+ TGCAAAGAGAGGCGGCAGCCCTTTCGCTATAGTGGCCCTTAGCAATAATCCGATCGAAAA
                      ____________________________________________________________
consensus TGCAAAGAGAGGCGGCAGCCCTTTCGCTATAGTGGCCCTTAGCAATAATCCGATCGAAAA
 
. : . : . : . : . : . :
JMSF052J10+ GCTCTCCCCCAGCACACAACTCCATCACAAGATACAGAATTAGCATCCTCATAAGCACCC
                      ____________________________________________________________
consensus GCTCTCCCCCAGCACACAACTCCATCACAAGATACAGAATTAGCATCCTCATAAGCACCC
 
. : . : . : . : . : . :
JMSF052J10+ TTGAACTCAACAATATTAGGCTGCCCACTCAAGTGCTGCATAATCTGAACCTCCCTCCTC
JMFF031D22+ C
JMFF001J13+ C
                      ____________________________________________________________
consensus TTGAACTCAACAATATTAGGCTGCCCACTCAAGTGCTGCATAATCTGAACCTCCCTCCTC
 
. : . : . : . : . : . :
JMSF052J10+ ATATCATCCTTATCCCCCTTGGTCACAAGCTTTTTCTTGGAAATTGACTTGCAGGCATAC
JMFF031D22+ ATATCATCCTTATCCCCCTTGGTCACAAGCTTTTTCTTGGAAATTGACTTGCAGGCATAC
JMFF001J13+ ATATCATCCTTATCCCCCTTGGTCACAAGCTTTTTCTTGGAAATTGACTTGCAGGCATAC
                      ____________________________________________________________
consensus ATATCATCCTTATCCCCCTTGGTCACAAGCTTTTTCTTGGAAATTGACTTGCAGGCATAC
 
. : . : . : . : . : . :
JMSF052J10+ TGCTTACCAGTTGTAATCTCAGTACACAGATAGGTAACCCCAAATTGACCCCTACCCAGT
JMFF031D22+ TGCTTACCAGTTGTAATCTCAGTACACAGATAGGTAACCCCAAATTGACCCCTACCCAGT
JMFF001J13+ TGCTTACCAGTTGTAATCTCAGTACACAGATAGGTAACCCCAAATTGACCCCTACCCAGT
                      ____________________________________________________________
consensus TGCTTACCAGTTGTAATCTCAGTACACAGATAGGTAACCCCAAATTGACCCCTACCCAGT
 
. : . : . : . : . : . :
JMSF052J10+ TCTTTCCCCAGACTGTAATGTGCCCTAACATCTTCATATGCCTTACCCAGAATTGCATCC
JMFF031D22+ TCTTTCCCCAAACTGTAATGTGCCCTAACATCTTCATATGCCTTACCCAGAATTGCATCC
JMFF001J13+ TCTTTCCCCAGACTGTAATGTGCCCTAACATCTTCATATGCCTTACCCAGAATTGCATCC
                      ____________________________________________________________
consensus TCTTTCCCCAGACTGTAATGTGCCCTAACATCTTCATATGCCTTACCCAGAATTGCATCC
 
. : . : . : . : . : . :
JMSF052J10+ GACTTTGAAACTGGTTTTGAGATTGATGGTGGCCGTGTAGGCAGTCCAGCTCCCTGCCCA
JMFF031D22+ GACTTTGAAACTGGTTTTGAGATTGATGGTGGCCGTGTAGGCAGTCCAGCTCCCTGCCCA
JMFF001J13+ GACTTTGAAACTGGTTTTGAGATTGATGGTGGCCGTGTAGGCAGTCCAGCTCCCTGCCCA
                      ____________________________________________________________
consensus GACTTTGAAACTGGTTTTGAGATTGATGGTGGCCGTGTAGGCAGTCCAGCTCCCTGCCCA
 
. : . : . : . : . : . :
JMSF052J10+ GGTGACTTTGTGTACTCAATGTGAGTCTGATGGGGTTGGCTTCCTCCTCCTCCATGCCCA
JMFF031D22+ GGTGACTTTGTGTACTCAATGTGAGTCTGATGGGGTTGGCTTCCTCCTCCTCCATGCCCA
JMFF001J13+ GGTGACTTTGTGTACTCAATGTGAGTCTGATGGGGTTGGCTTCCTCCTCCTCCATGCCCA
                      ____________________________________________________________
consensus GGTGACTTTGTGTACTCAATGTGAGTCTGATGGGGTTGGCTTCCTCCTCCTCCATGCCCA
 
. : . : . : . : . : . :
JMSF052J10+ GCTTCTGATCTGTGCTTTTCACCATGCTTATGTCTGCTTGAACGGTTACCCATCTCTCTT
JMFF031D22+ GCTTCTGATCTGTGCTTTTCACCATGCTTATGTCTGCTTGAACGGTTACCCATCTCTCTT
JMFF001J13+ GCTTCTGATCTGTGCTTTTCACCATGCTTATGTCTGCTTGAACGGTTACCCATCTCTCTT
                      ____________________________________________________________
consensus GCTTCTGATCTGTGCTTTTCACCATGCTTATGTCTGCTTGAACGGTTACCCATCTCTCTT
 
. : . : . : . : . : . :
JMSF052J10+ ACTCGGAAATTAAAAGAGAAGAAACGCCCAGCTGAATCCTCCAAGACTAATCAGAAAGGA
JMFF031D22+ ACTCGGAAATTAAAAGAGAAGAAACGCCCAGCTGAATCCTCCAAGACTAATCAGAAAGGA
JMFF001J13+ ACTCGGAAATTAAAAGAGAAGAAACGCCCAGCTGAATCCTCCAAGACTAATCAGAAAGGA
                      ____________________________________________________________
consensus ACTCGGAAATTAAAAGAGAAGAAACGCCCAGCTGAATCCTCCAAGACTAATCAGAAAGGA
 
. : . : . : . : . : . :
JMSF052J10+ GGAA
JMFF031D22+ GGAACGTGAAGACTAGAGCAGCTTTGTATATTACAGTCGATTTACAGTATAAGACGTTGC
JMFF001J13+ GGAACGTGAAGACTAGAGCAGCTTTGTATATTACAGTCGATTTACAGTATAAGACGTTGT
                      ____________________________________________________________
consensus GGAACGTGAAGACTAGAGCAGCTTTGTATATTACAGTCGATTTACAGTATAAGACGTTGT
 
. : . : . : . : . : . :
JMFF031D22+ CCGGTTT
JMFF001J13+ CCGGTTTAGATAGACCGGGGATTGGCCCTTCCAAGAAAAGGGGTGGAGAGAAGAAAGAAC
                      ____________________________________________________________
consensus CCGGTTTAGATAGACCGGGGATTGGCCCTTCCAAGAAAAGGGGTGGAGAGAAGAAAGAAC