Contig 012804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A17Sequence561012804 (3)649022277ref|XP_004247144.2|4e-67PREDICTED: isoamylase 2, chloroplastic [Solanum lycopersicum]
JMFF037C06Sequence561012804 (3)
JMFS112C10Sequence601012804 (3)ref|XP_009598489.1|4e-19PREDICTED: isoamylase 2, chloroplastic [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS112C10+ GAATCCA
                      ____________________________________________________________
consensus GAATCCA
 
. : . : . : . : . : . :
JMFS112C10+ AAGACATAAGAGATGGGAATCAGACCTAAATAATCCCCATATCATAACCAGCTCACCGAG
                      ____________________________________________________________
consensus AAGACATAAGAGATGGGAATCAGACCTAAATAATCCCCATATCATAACCAGCTCACCGAG
 
. : . : . : . : . : . :
JMFS112C10+ TCTGCCATCAAGCTCTGACGGTAAAACTTGAATTTGTACTCCATACTTACTATTCCTCTT
                      ____________________________________________________________
consensus TCTGCCATCAAGCTCTGACGGTAAAACTTGAATTTGTACTCCATACTTACTATTCCTCTT
 
. : . : . : . : . : . :
JMFS112C10+ ATCAACAGACACCTTCACTAGGCCAGTGGTCTCGGTTCTGAAGAGATATTTTGACACTTG
JMFF037C06+ GAAGAGATATTTTGACACTTG
JMFF001A17+ GAAGAGATATTTTGACACTTG
                      ____________________________________________________________
consensus ATCAACAGACACCTTCACTAGGCCAGTGGTCTCGGTTCTGAAGAGATATTTTGACACTTG
 
. : . : . : . : . : . :
JMFS112C10+ TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
JMFF037C06+ TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
JMFF001A17+ TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
                      ____________________________________________________________
consensus TCCAGCAGTTTGTATAACAGAAGTATCTGCTGCTGTTGCTGCCACCACCATTAGACCGTA
 
. : . : . : . : . : . :
JMFS112C10+ CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
JMFF037C06+ CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
JMFF001A17+ CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
                      ____________________________________________________________
consensus CGGTGTACTAGAAATTTTTTGAGTAAAATTTCCGCCATTCCAGTAGAACGGTTTCTGTAC
 
. : . : . : . : . : . :
JMFS112C10+ TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
JMFF037C06+ TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
JMFF001A17+ TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
                      ____________________________________________________________
consensus TGCATCCACATTCCTTAGACCGCATACTACTCTTTCACTATGGCAACCGCGAGCACAAGC
 
. : . : . : . : . : . :
JMFS112C10+ AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
JMFF037C06+ AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
JMFF001A17+ AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
                      ____________________________________________________________
consensus AACTGACTTGGATGACCCAGCAGTTCCCCGGCCAAGGTAGCATGATTGTAGCACAGATGA
 
. : . : . : . : . : . :
JMFS112C10+ TAGTGGTAACATTGCCATTTGAATACTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
JMFF037C06+ TAGTGGTAACATTGCCATTTGAATAGTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
JMFF001A17+ TAGTGGTAACATTGCCATTTGAATAGTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
                      ____________________________________________________________
consensus TAGTGGTAACATTGCCATTTGAATAGTTAAGGAGATATTAGGACCAAGCCAAACATAGAG
 
. : . : . : . : . : . :
JMFS112C10+ TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
JMFF037C06+ TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
JMFF001A17+ TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
                      ____________________________________________________________
consensus TTTGGTCAGTCATCCGAATCTCGTCCATTAACTGAACCAAACATCAAGAATCCGCATTGA
 
. : . : . : . : . : . :
JMFS112C10+ ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGA
JMFF037C06+ ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGAGCTGCT
JMFF001A17+ ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGAGCTGCT
                      ____________________________________________________________
consensus ACTTCAGACTGCGCCATGAAAAGCCCTTTTATGTGTTTAAGAATTCTGGGGTGAGCTGCT
 
. : . : . : . : . : . :
JMFF037C06+ TAAAATGAGAATGATAAATAATCAAATCAAATGGCTCCAAAGTCCGATATAGAAGTGACA
JMFF001A17+ TAAAATGAGAATGATAAATAATCAAATCAAATGGCTCCAAAGTCCGATATAGAAGTGACA
                      ____________________________________________________________
consensus TAAAATGAGAATGATAAATAATCAAATCAAATGGCTCCAAAGTCCGATATAGAAGTGACA
 
. : . : . : . : . : . :
JMFF037C06+ GGGAGAAGAGTGGAAATTGGAATGATCACGGACCGCAAACCGAGGATCCTCGAGCAC
JMFF001A17+ GGGAGAAGAGTGGAAATTGGAATGATCACGGACCGCAAACCGAGGATCCTCGAGCACCGT
                      ____________________________________________________________
consensus GGGAGAAGAGTGGAAATTGGAATGATCACGGACCGCAAACCGAGGATCCTCGAGCACCGT