Contig 012800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016D10Sequence609012800 (2)gb|EPS74553.1|1e-52hypothetical protein M569_00200 [Genlisea aurea]
JMSF018G04Sequence251012800 (2)824015013ref|XP_006341358.1|2e-40PREDICTED: stromal cell-derived factor 2-like protein-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP016D10+ ATCACCTTG
                      ____________________________________________________________
consensus ATCACCTTG
 
. : . : . : . : . : . :
rJMCP016D10+ CTTTGCAGACGAGTCTGGAGCAGGCTTAACAATCCAATAGCTGTTGGCATCATCTACAGT
                      ____________________________________________________________
consensus CTTTGCAGACGAGTCTGGAGCAGGCTTAACAATCCAATAGCTGTTGGCATCATCTACAGT
 
. : . : . : . : . : . :
rJMCP016D10+ AGGATATCCGGTGACCGACTGCTGCCCACTGCCAGAACCGTAGGGCACATCATGCGAATG
                      ____________________________________________________________
consensus AGGATATCCGGTGACCGACTGCTGCCCACTGCCAGAACCGTAGGGCACATCATGCGAATG
 
. : . : . : . : . : . :
rJMCP016D10+ CAACCGGACCTTTGTCTTCTCATGCATCAACTTGATTGTTGATCCATAAGTAATCTGGAC
                      ____________________________________________________________
consensus CAACCGGACCTTTGTCTTCTCATGCATCAACTTGATTGTTGATCCATAAGTAATCTGGAC
 
. : . : . : . : . : . :
rJMCP016D10+ GCCTTCAGAAGCGGCGGAGGCAGAGCCGATCGAGTAATCGGAATCGAGGGTGAGGATGAG
                      ____________________________________________________________
consensus GCCTTCAGAAGCGGCGGAGGCAGAGCCGATCGAGTAATCGGAATCGAGGGTGAGGATGAG
 
. : . : . : . : . : . :
rJMCP016D10+ AAAGATGGCGAGGGCGAAACAAGAGAGCGCCATAACAAATAGCAGTACTATGAACCAGGT
                      ____________________________________________________________
consensus AAAGATGGCGAGGGCGAAACAAGAGAGCGCCATAACAAATAGCAGTACTATGAACCAGGT
 
. : . : . : . : . : . :
JMSF018G04+ ACACTAACCGGGT
rJMCP016D10+ CCTTTGCCAAACTGGGAGGTCCAAATCGGAAGTTGCGGGTTCGCGGTACACTAACCGGGT
                      ____________________________________________________________
consensus CCTTTGCCAAACTGGGAGGTCCAAATCGGAAGTTGCGGGTTCGCGGTACACTAACCGGGT
 
. : . : . : . : . : . :
JMSF018G04+ CGGACTGGAAAGTGTTTGATTCCACAACGTCGTCGACGGTGGTGCTGACTTCCTACGGGT
rJMCP016D10+ CGGACTGGAAAGTGTTTGATTCCACAACGTCGTCGACGGTGGTGCTGACTTCCTACGGGT
                      ____________________________________________________________
consensus CGGACTGGAAAGTGTTTGATTCCACAACGTCGTCGACGGTGGTGCTGACTTCCTACGGGT
 
. : . : . : . : . : . :
JMSF018G04+ GAGATTTTGACGTTGGCGTTGTTGTTGGCTTGAAGAAGCCACGGTTGAAGCTCTTGGAGG
rJMCP016D10+ GAGATTTTGACGTTGGCGTTGTTGTTGGCTTcttcAAGCCACGGTTGAAGCTCTTGGAGG
                      ____________________________________________________________
consensus GAGATTTTGACGTTGGCGTTGTTGTTGGCTTGAAGAAGCCACGGTTGAAGCTCTTGGAGG
 
. : . : . : . : . : . :
JMSF018G04+ GCGCCTGACGGAGCTCCGATGAAGATCCGATCAAAACACTTCTGATTCCGATTTTCCGGC
rJMCP016D10+ GCGCCTGACGGAGCTCCGATGAAGATCCGATCAAAACACTTCTGATTCCGATTTTCCGGC
                      ____________________________________________________________
consensus GCGCCTGACGGAGCTCCGATGAAGATCCGATCAAAACACTTCTGATTCCGATTTTCCGGC
 
. : . : . : . : . : . :
JMSF018G04+ GACGCTTTTATTTATTTTCTTTTTCCGTATTTAATGTTTCATTTTTCAGTTCTTCTC
rJMCP016D10+ GACGCTTTTATTTATTTTCTTTTTCCGTATTTAATGTTTCATTTTTCAGTTCTTCTCTCC
                      ____________________________________________________________
consensus GACGCTTTTATTTATTTTCTTTTTCCGTATTTAATGTTTCATTTTTCAGTTCTTCTCTCC