Contig 012796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP007C06Sequence428012796 (2)ref|XP_009767374.1|4e-13PREDICTED: WAT1-related protein At4g08300-like [Nicotiana sylvestris]
JMCP008H08Sequence428012796 (2)ref|XP_009767374.1|4e-13PREDICTED: WAT1-related protein At4g08300-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP008H08+ GTGAATAA
JMCP007C06+ GTGAATAA
                      ____________________________________________________________
consensus GTGAATAA
 
. : . : . : . : . : . :
JMCP008H08+ ATTAAAGTTGAATTGAAGCACTTTTACGACCAACTTTATAAATGCATTGCTTTGAAAGTT
JMCP007C06+ ATTAAAGTTGAATTGAAGCACTTTTACGACCAACTTTATAAATGCATTGCTTTGAAAGTT
                      ____________________________________________________________
consensus ATTAAAGTTGAATTGAAGCACTTTTACGACCAACTTTATAAATGCATTGCTTTGAAAGTT
 
. : . : . : . : . : . :
JMCP008H08+ TAAAGCAGCATATAGCCAGCGATTACATTAATACATAACATAAAGACCTCAAAACTTTAG
JMCP007C06+ TAAAGCAGCATATAGCCAGCGATTACATTAATACATAACATAAAGACCTCAAAACTTTAG
                      ____________________________________________________________
consensus TAAAGCAGCATATAGCCAGCGATTACATTAATACATAACATAAAGACCTCAAAACTTTAG
 
. : . : . : . : . : . :
JMCP008H08+ GATACCATCACGAGTACAAATTGCATGCACACAATTTCTTTTTAATAGTAAATTCTATAT
JMCP007C06+ GATACCATCACGAGTACAAATTGCATGCACACAATTTCTTTTTAATAGTAAATTCTATAT
                      ____________________________________________________________
consensus GATACCATCACGAGTACAAATTGCATGCACACAATTTCTTTTTAATAGTAAATTCTATAT
 
. : . : . : . : . : . :
JMCP008H08+ TTTAAGCCTCTTGTGGAGTCTTCTCCTGGAGCTTAGATTTGATTGTGTCCTTGGATTCAA
JMCP007C06+ TTTAAGCCTCTTGTGGAGTCTTCTCCTGGAGCTTAGATTTGATTGTGTCCTTGGATTCAA
                      ____________________________________________________________
consensus TTTAAGCCTCTTGTGGAGTCTTCTCCTGGAGCTTAGATTTGATTGTGTCCTTGGATTCAA
 
. : . : . : . : . : . :
JMCP008H08+ CACTCTCTCTGTCCATCATCACAATTGGTAATTCTTGCATTTTCCCTTTCTCATTTGTCT
JMCP007C06+ CACTCTCTCTGTCCATCATCACAATTGGTAATTCTTGCATTTTCCCTTTCTCATTTGTCT
                      ____________________________________________________________
consensus CACTCTCTCTGTCCATCATCACAATTGGTAATTCTTGCATTTTCCCTTTCTCATTTGTCT
 
. : . : . : . : . : . :
JMCP008H08+ CATCCTTGCTTTTACCCCACACCACTGAGTACAGACCAATCACTATGATGAATGCCCCAA
JMCP007C06+ CATCCTTGCTTTTACCCCACACCACTGAGTACAGACCAATCACTATGATGAATGCCCCAA
                      ____________________________________________________________
consensus CATCCTTGCTTTTACCCCACACCACTGAGTACAGACCAATCACTATGATGAATGCCCCAA
 
. : . : . : . : . : . :
JMCP008H08+ TCAAACTTCCAGCGTAGATATTCTCGGCCAAAATAATACCAGCAAGAACGGCTGTTATGA
JMCP007C06+ TCAAACTTCCAGCGTAGATATTCTCGGCCAAAATAATACCAGCAAGAACGGCTGTTATGA
                      ____________________________________________________________
consensus TCAAACTTCCAGCGTAGATATTCTCGGCCAAAATAATACCAGCAAGAACGGCTGTTATGA