Contig 012795:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047C14Sequence691012795 (2)emb|CDP08983.1|1e-125unnamed protein product [Coffea canephora]802017259ref|XP_009794082.1|2e-92PREDICTED: 3-ketoacyl-CoA synthase 12-like [Nicotiana sylvestris]
JMSF053I07Sequence270010953 (2)873012795 (2)ref|XP_009804844.1|8e-81PREDICTED: 3-ketoacyl-CoA synthase 3-like, partial [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047C14+ GGTGAAGCATAAAGCCATGTTCAAGCTGAAAAC
                      ____________________________________________________________
consensus GGTGAAGCATAAAGCCATGTTCAAGCTGAAAAC
 
. : . : . : . : . : . :
JMSF047C14+ CCTAGTGAGAACTCACCACGGCGGGAAAGATGAGTCCTATAATTGTTGCATACAAAAGGA
                      ____________________________________________________________
consensus CCTAGTGAGAACTCACCACGGCGGGAAAGATGAGTCCTATAATTGTTGCATACAAAAGGA
 
. : . : . : . : . : . :
JMSF047C14+ GGATGAACTCGGGAAACTCGGGTTCCACCTCGGAAAAACCCTCCCAAAAGCCGCAACCAT
                      ____________________________________________________________
consensus GGATGAACTCGGGAAACTCGGGTTCCACCTCGGAAAAACCCTCCCAAAAGCCGCAACCAT
 
. : . : . : . : . : . :
JMSF047C14+ GGCGTTCTTCGACAACCTCAAAGAAATCGCGCCCAGAATCCTCCCCGTCCGGGAGCTTAT
                      ____________________________________________________________
consensus GGCGTTCTTCGACAACCTCAAAGAAATCGCGCCCAGAATCCTCCCCGTCCGGGAGCTTAT
 
. : . : . : . : . : . :
JMSF047C14+ CCGCTACGCCGCCCTCTCGTTCCTCCAAAAACTCCCGACAAACTCCGGAAAACCCGGAAC
                      ____________________________________________________________
consensus CCGCTACGCCGCCCTCTCGTTCCTCCAAAAACTCCCGACAAACTCCGGAAAACCCGGAAC
 
. : . : . : . : . : . :
JMSF047C14+ CACCTCAAAACCGGCGGCCATCAACTTCAAGACTGGAATCGATCACTTCTGCATCCACAC
rJMSF053I07+ CACTTCTGCCTGCACAC
                      ____________________________________________________________
consensus CACCTCAAAACCGGCGGCCATCAACTTCAAGACTGGAATCGATCACTTCTGCCTGCACAC
 
. : . : . : . : . : . :
JMSF047C14+ CGGCGGGAAAGCGGTGATCAACGGCATAGGGCAGAGCCTCAACCTGAGCGAATATGATTT
rJMSF053I07+ CGGCGGGAAGGCGGTGATCGACGGCATCGGGCAGAACCTGAACCTGAGCGAGTACGATCT
                      ____________________________________________________________
consensus CGGCGGGAAGGCGGTGATCGACGGCATCGGGCAGAGCCTGAACCTGAGCGAGTATGATTT
 
. : . : . : . : . : . :
JMSF047C14+ GGAGCCGGCGAGAATGACGCTGCACAGATTCGGGAACACGTCGGCCGGCAGCCTCTGGTA
rJMSF053I07+ GGAGCCGGCGAGAATGACGCTCCACCGGTTCGGCAACACCTCCGCCAGTAGCCTCTGGTA
                      ____________________________________________________________
consensus GGAGCCGGCGAGAATGACGCTGCACCGGTTCGGGAACACGTCGGCCGGTAGCCTCTGGTA
 
. : . : . : . : . : . :
JMSF047C14+ CGTGCTGGCCTACATGGAAGCTAAGAAGAGGCTTAAGAAAGGGGATAAGGTGTTCATGAT
rJMSF053I07+ CGTTCTGGGGTACATGGAGGCCAAGAAGCGGCTCAAGAAAGGCGACAAGGTGTTCATGAT
                      ____________________________________________________________
consensus CGTTCTGGGGTACATGGAGGCTAAGAAGCGGCTTAAGAAAGGGGATAAGGTGTTCATGAT
 
. : . : . : . : . : . :
JMSF047C14+ TAGCTTCGGGGCGGGGTTTAAGTGCAACAGTTGTGTGTGGGAAGTGGTTCGAGATTTGG
rJMSF053I07+ CAGCTTCGGGGCGGGGTTTAAGTGCAACAGTTGCCTGTGGGAGGTGGTTAGGGATTTGGG
                      ____________________________________________________________
consensus TAGCTTCGGGGCGGGGTTTAAGTGCAACAGTTGTGTGTGGGAGGTGGTTCGGGATTTGGG
 
. : . : . : . : . : . :
rJMSF053I07+ AGAAGAAGAAAATGTGTGGAAAGATGACATCCATAACTACCCTCCCCAAACCCTAACCAA
                      ____________________________________________________________
consensus AGAAGAAGAAAATGTGTGGAAAGATGACATCCATAACTACCCTCCCCAAACCCTAACCAA
 
. : . : . : . : . : . :
rJMSF053I07+ CCCTTTCTTGGACAAGTTTGGATGGCTCCAACATGAAGATCCAAACACCTTCAACATTCC
                      ____________________________________________________________
consensus CCCTTTCTTGGACAAGTTTGGATGGCTCCAACATGAAGATCCAAACACCTTCAACATTCC
 
. : . : . : . : . : . :
rJMSF053I07+ AGATGACTACGTCATCCCATGATGTTTTTCTTCCGGTAAAAAATGCACTTTTAGTCCCTC
                      ____________________________________________________________
consensus AGATGACTACGTCATCCCATGATGTTTTTCTTCCGGTAAAAAATGCACTTTTAGTCCCTC
 
. : . : . : . : . : . :
rJMSF053I07+ AATTTTACCCTCTTCTTAGAGATCTGAACAAATTTGATCACTACTCGAAATTATCTAAAT
                      ____________________________________________________________
consensus AATTTTACCCTCTTCTTAGAGATCTGAACAAATTTGATCACTACTCGAAATTATCTAAAT
 
. : . : . : . : . : . :
rJMSF053I07+ TGTTGTTAATTCAACCCTTCGATATAGTACCAACTTTCAAACTCTATTAGTACACACGTG
                      ____________________________________________________________
consensus TGTTGTTAATTCAACCCTTCGATATAGTACCAACTTTCAAACTCTATTAGTACACACGTG
 
. : . : . : . : . : . :
rJMSF053I07+ CCAGATTTGTTCGGATTATCTGGACTACTAGAGTACTAGTGAAGTTTGAGGGTAGTACTA
                      ____________________________________________________________
consensus CCAGATTTGTTCGGATTATCTGGACTACTAGAGTACTAGTGAAGTTTGAGGGTAGTACTA
 
. : . : . : . : . : . :
rJMSF053I07+ TATGACAAGGGACTCAATTCATAATACTTTAGACAATTGATGAGAGATCAAATTTATTTA
                      ____________________________________________________________
consensus TATGACAAGGGACTCAATTCATAATACTTTAGACAATTGATGAGAGATCAAATTTATTTA
 
. : . : . : . : . : . :
rJMSF053I07+ ATTAAATTGAAAGACTATAGTAACAATTATGTTTTTTTTTCCCTTTTTCTTCGTTAGGTT
                      ____________________________________________________________
consensus ATTAAATTGAAAGACTATAGTAACAATTATGTTTTTTTTTCCCTTTTTCTTCGTTAGGTT