Contig 012785:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M05Sequence356001618 (5)ref|XP_009790737.1|83.2PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris]653012785 (3)ref|XP_006366766.1|2e-51PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum]
JMFF013L06Sequence517001618 (5)ref|XP_009790737.1|176PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris]753012785 (3)ref|XP_004243223.1|296PREDICTED: transmembrane 9 superfamily member 4 [Solanum lycopersicum]
JMSF051G21Sequence651001618 (5)ref|XP_009790737.1|268PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris]741012785 (3)ref|XP_009602688.1|211PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF013L06+ CGAGCTGAGGCTATACA
                      ____________________________________________________________
consensus CGAGCTGAGGCTATACA
 
. : . : . : . : . : . :
rJMFF013L06+ GTACCCAGTGCGAACTAACCAAATTCCTAGGGAGATCCCATCGCGCAAATATCCATCATG
                      ____________________________________________________________
consensus GTACCCAGTGCGAACTAACCAAATTCCTAGGGAGATCCCATCGCGCAAATATCCATCATG
 
. : . : . : . : . : . :
rJMFF013L06+ GCTTCTTATCCTTGGAGCTGGAACCCTCCCATTTGGAACACTCTTCATTGAACTTTTCTT
rJMSF051G21+ CACTCTTCATTGAACTTTTCTT
                      ____________________________________________________________
consensus GCTTCTTATCCTTGGAGCTGGAACCCTCCCATTTGGAACACTCTTCATTGAACTTTTCTT
 
. : . : . : . : . : . :
rJMFF013L06+ TATCCTCTCTAGTATCTGGCTTGGACGGTTCTACTATGTGTTTGGTTTTCTCTTCATTGT
rJMFF002M05+ TTTCTCTTCATTGT
rJMSF051G21+ TATCCTCTCTAGTATCTGGCCTGGACGGTTCTACTATGTGTTTGGTTTTCTCTTCATTGT
                      ____________________________________________________________
consensus TATCCTCTCTAGTATCTGGCTTGGACGGTTCTACTATGTGTTTGGTTTTCTCTTCATTGT
 
. : . : . : . : . : . :
rJMFF013L06+ TCTCCTGCTCCTGGTCATTATCTGTGCCGAGGTCTCACTTGTCCTCACTTACATGCATCT
rJMFF002M05+ TCTCCTGCTCCTGGTCATTATCTGTGCCGAGGTCTCACTTGTCCTCACTTACATGCATCT
rJMSF051G21+ TCTCCTGCTCCTGGTCATTATCTGTGCCGAGGTCTCACTTGTCCTCACTTACATGCATCT
                      ____________________________________________________________
consensus TCTCCTGCTCCTGGTCATTATCTGTGCCGAGGTCTCACTTGTCCTCACTTACATGCATCT
 
. : . : . : . : . : . :
rJMFF013L06+ CTGCGTCGAGGATTGGATGTGGTGGTGGAAAGCATTCTATGCCTCGGGTTCAGTCTCTCT
rJMFF002M05+ CTGCGTCGAGGATTGGATGTGGTGGTGGAAAGCATTCTATGCCTCGGGTTCAGTCTCTCT
rJMSF051G21+ CTGCGTCGAGGATTGGATGTGGTGGTGGAAAGCATTCTATGCCTCGGGTTCAGTCTCTCT
                      ____________________________________________________________
consensus CTGCGTCGAGGATTGGATGTGGTGGTGGAAAGCATTCTATGCCTCGGGTTCAGTCTCTCT
 
. : . : . : . : . : . :
rJMFF013L06+ GTACGTGTTCTTGTATTCCGTTAATTACTTAGTCTTTGACCTCCAGAGCCTGAGCGGGCC
rJMFF002M05+ GTACGTGTTCTTGTATTCCGTTAATTACTTAGTCTTTGACCTCCAGAGCCTGAGCGGGCC
rJMSF051G21+ GTACGTGTTCTNGTATTCCGTTAATTACTTAGTCTTTGACCTCCAGAGCCTGAGCGGGCC
                      ____________________________________________________________
consensus GTACGTGTTCTTGTATTCCGTTAATTACTTAGTCTTTGACCTCCAGAGCCTGAGCGGGCC
 
. : . : . : . : . : . :
rJMFF013L06+ AGTGTCTGCTATACTGTATCTCGGCTATTCACTCATAATGGCAGTTGCAGTCATGCTCGC
rJMFF002M05+ AGTGTCTGCTATACTGTATCTCGGCTATTCACTCATAATGGCAGTTGCAGTCATGCTCGC
rJMSF051G21+ AGTGTCTGCTATACTGTATCTCGGCTATTCACTCATAATGGCAGTTGCAGTCATGCTCGC
                      ____________________________________________________________
consensus AGTGTCTGCTATACTGTATCTCGGCTATTCACTCATAATGGCAGTTGCAGTCATGCTCGC
 
. : . : . : . : . : . :
rJMFF013L06+ TACTGGCACCATCGGTCTTCTCACTTCGTTTTACTTCGTTCATTACCTCTTCTCCTCGGT
rJMFF002M05+ TACTGGCACCATCGGTCTTCTCACTTCGTTTTACTTCGTTCATTACCTCTTCTCCTCGGT
rJMSF051G21+ TACTGGCACCATCGGTCTTCTCACTTCGTTTTACTTCGTTCATTACCTCTTCTCCTCGGT
                      ____________________________________________________________
consensus TACTGGCACCATCGGTCTTCTCACTTCGTTTTACTTCGTTCATTACCTCTTCTCCTCGGT
 
. : . : . : . : . : . :
rJMFF013L06+ GAAGATTGACTGAGGGGGGA-TTTAGATAGCCGATTCTTGACAGCGAGAGAGAAAGCTTT
rJMFF002M05+ GAAGATTGACTGAGGGGGGATTTTAGATAGCCGATTCTTGACAGCGAGAGAGAAAGCTTT
rJMSF051G21+ GAAGATTGACTGAGGGGGGA-TTTAGATAGCCGATTCTTGACAGCGAGAGAGAAAGCTTT
                      ____________________________________________________________
consensus GAAGATTGACTGAGGGGGGA-TTTAGATAGCCGATTCTTGACAGCGAGAGAGAAAGCTTT
 
. : . : . : . : . : . :
rJMFF013L06+ AGTGCTCATTTTCTCACGCTGTGGTTACGTTGCCAAATGAGAGATTCTTAGAAGCTGGTT
rJMFF002M05+ AGTGCTCATTTTCTCACGCTGTGGTTACGTTGCCAAATGAGAGATTCTTAGAAGCTGGTT
rJMSF051G21+ AGTGCTCATTTTCTCACGCTGTGGTTACGTTGCCAAATGAGAGATTCTTAGAAGCTGGTT
                      ____________________________________________________________
consensus AGTGCTCATTTTCTCACGCTGTGGTTACGTTGCCAAATGAGAGATTCTTAGAAGCTGGTT
 
. : . : . : . : . : . :
rJMFF013L06+ GGGGCTGAAGGCCTGGCCTGGCCTGCTAGCTAAGATATAATTCTTTTTCTTGATACTCTG
rJMFF002M05+ GGGGCTGAAGGCCTGGCCTGGCCTGCTAGCTAAGATATAATTCTTTTTCTTGATACTCTG
rJMSF051G21+ GGGGCTGAAGGCCTGGCCTGGCCTGCTAGCTAAGATATAATTCTTTTTCTTGATACTCTG
                      ____________________________________________________________
consensus GGGGCTGAAGGCCTGGCCTGGCCTGCTAGCTAAGATATAATTCTTTTTCTTGATACTCTG
 
. : . : . : . : . : . :
rJMFF013L06+ GATGCTAAAAATGTTTCATTTGTATCGGTTTTAATGTGGTGTTTAATGCCTGGTGGTCAA
rJMFF002M05+ GATGCTAAAAATGTTTCATTTGTATCGGTTTTAATGTGGTGTTTAATGCCTGGTGGTCAA
rJMSF051G21+ GATGCTAAAAATGTTTCATTTGTATCGGTTTTAATGTGGTGTTTAATGCCTGGTGGTCAA
                      ____________________________________________________________
consensus GATGCTAAAAATGTTTCATTTGTATCGGTTTTAATGTGGTGTTTAATGCCTGGTGGTCAA
 
. : . : . : . : . : . :
rJMFF013L06+ TGTATTCTGCGTTTTCT
rJMFF002M05+ TGTATTCTGCGTTTTCTTCATCTTTCTGCATTTAAGTTTTGTGTAGCTTCGTCCATTCCA
rJMSF051G21+ TGTATTCTGCGTTTTCTTCATCTTTCTGCANTTAAGTTTTGTGTAGCTTCGTCCATTCCA
                      ____________________________________________________________
consensus TGTATTCTGCGTTTTCTTCATCTTTCTGCATTTAAGTTTTGTGTAGCTTCGTCCATTCCA
 
. : . : . : . : . : . :
rJMFF002M05+ CTTGTTTTGGAC
rJMSF051G21+ CTTGTTTTGGACCANGTATNGAAACGCGCATATTGTAGTTAAATGTTTGATAGATCGAGC
                      ____________________________________________________________
consensus CTTGTTTTGGACCANGTATNGAAACGCGCATATTGTAGTTAAATGTTTGATAGATCGAGC