clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF044J05 | Sequence | 829 | 006694 (3) | ref|XP_011075875.1| | 5e-111 | PREDICTED: uncharacterized calcium-binding protein At1g02270 [Sesamum indicum] | 784 | 012776 (3) | emb|CDP04975.1| | 1e-108 | unnamed protein product [Coffea canephora] |
JMSF045F13 | Sequence | 791 | 006694 (3) | ref|XP_011075875.1| | 1e-102 | PREDICTED: uncharacterized calcium-binding protein At1g02270 [Sesamum indicum] | 810 | 012776 (3) | ref|XP_007136365.1| | 8e-12 | hypothetical protein PHAVU_009G039100g, partial [Phaseolus vulgaris] gb|ESW08359 |
JMSF050D06 | Sequence | 710 | 006694 (3) | ref|XP_011075875.1| | 3e-105 | PREDICTED: uncharacterized calcium-binding protein At1g02270 [Sesamum indicum] | 769 | 012776 (3) |
This contig is upended
. : . : . : . : . : . :
rJMSF044J05+ TCAGGGATTTATATCATCCTATGATACTGCACACCAGTACGCTGAT
____________________________________________________________
consensus TCAGGGATTTATATCATCCTATGATACTGCACACCAGTACGCTGAT
. : . : . : . : . : . :
rJMSF044J05+ GCAGATGCACAGAAGTGGGTGAGCCATCGGAATCACCGAGGGAACATCTGTGGTGTGGAT
____________________________________________________________
consensus GCAGATGCACAGAAGTGGGTGAGCCATCGGAATCACCGAGGGAACATCTGTGGTGTGGAT
. : . : . : . : . : . :
rJMSF044J05+ TTTATATGGCTTCTTAATCCTAACAAGTACAGGAAGTTGCTGAAAACGAGTTGGAGTCAG
____________________________________________________________
consensus TTTATATGGCTTCTTAATCCTAACAAGTACAGGAAGTTGCTGAAAACGAGTTGGAGTCAG
. : . : . : . : . : . :
rJMSF044J05+ GCAATCTTTGGAATGTTTAAGTATCAACTCCGTCGTGCCTCTTTGACAGAAGAGGATGCA
____________________________________________________________
consensus GCAATCTTTGGAATGTTTAAGTATCAACTCCGTCGTGCCTCTTTGACAGAAGAGGATGCA
. : . : . : . : . : . :
rJMSF044J05+ TTTGCCTTTCTGAAGGCTGATAGCAGTGATGATTATATTTCATACTCCGATTTCTGTGAA
____________________________________________________________
consensus TTTGCCTTTCTGAAGGCTGATAGCAGTGATGATTATATTTCATACTCCGATTTCTGTGAA
. : . : . : . : . : . :
rJMSF044J05+ GCTTTGCGGCAGCTTAGTTTGATCGGCAATCGCAATGGGCTGAGTATTCAGGAGATTAAT
____________________________________________________________
consensus GCTTTGCGGCAGCTTAGTTTGATCGGCAATCGCAATGGGCTGAGTATTCAGGAGATTAAT
. : . : . : . : . : . :
rJMSF044J05+ GATTTGTGGGTGCAAGCAGATATGGATGGAAACGGTGTTGTTGATTACAAAGAATTCAAG
____________________________________________________________
consensus GATTTGTGGGTGCAAGCAGATATGGATGGAAACGGTGTTGTTGATTACAAAGAATTCAAG
. : . : . : . : . : . :
rJMSF044J05+ CAACGGATATGGAACCCGACATGGTCAGAACAAAGAGACGACCAATGGGACGACAGCGAA
rJMSF045F13+ AA
____________________________________________________________
consensus CAACGGATATGGAACCCGACATGGTCAGAACAAAGAGACGACCAATGGGACGACAGCGAA
. : . : . : . : . : . :
rJMSF044J05+ AACGCCATAGATGAAGCCATCGGGTTTAGCATCCAGGACGCGGTTC-TTTTCCCCAAGGA
rJMSF045F13+ AACGCCATAGATGAAGCCATCGGGTTTAGCATCCAGGACGCGGTTCTTTTTCCCCAAGGA
____________________________________________________________
consensus AACGCCATAGATGAAGCCATCGGGTTTAGCATCCAGGACGCGGTTCTTTTTCCCCAAGGA
. : . : . : . : . : . :
rJMSF044J05+ AGTAGAGAAAGGGAAGTGGCCTGAAGAATATTCTCTCTCTGATCATGCCAAACTAACTGT
rJMSF045F13+ AGTAGAGAAAGGGAAGTGGCCTGAAGAATATTCTCTCTCTGATCATGCCAAACTAACTGT
____________________________________________________________
consensus AGTAGAGAAAGGGAAGTGGCCTGAAGAATATTCTCTCTCTGATCATGCCAAACTAACTGT
. : . : . : . : . : . :
rJMSF044J05+ TGTATTTTCACCAGTAAGAATGCGATGCTCTCAGTTAACCTGAGAAATATGCAATTCATA
rJMSF045F13+ TGTATTTTCACCAGTAAGAATGCGATGCTCTCAGTTAACCTGAGAAATATGCAATTCATA
rJMSF050D06+ CCAGTAAGAATGCGATGCTCTCAGTT-ACCTGAGAAATATGCAATTCATA
____________________________________________________________
consensus TGTATTTTCACCAGTAAGAATGCGATGCTCTCAGTTAACCTGAGAAATATGCAATTCATA
. : . : . : . : . : . :
rJMSF044J05+ ACTGTTTTGCAGTGCAAATTACTTACTGGGTTATAGGTAGAGAGATCATAGCCTGCTGGC
rJMSF045F13+ ACTGTTTTGCAGTGCAAATTACTTACTGGGTTATAGGTAGAGAGATCATAGCCTGCTGGC
rJMSF050D06+ ACTGTTTTGCAGTGCAAATTACTTACTGGGTTATAGGTAGAGAGATCATAGCCTGCTGGC
____________________________________________________________
consensus ACTGTTTTGCAGTGCAAATTACTTACTGGGTTATAGGTAGAGAGATCATAGCCTGCTGGC
. : . : . : . : . : . :
rJMSF044J05+ TGGGGTGGACGCATGCCCTCAGAATTTTA-TTTTTTTTCTCACTAATTTTATATATATGT
rJMSF045F13+ TGGGGTGGACGCATGCCCTCAGAATTTTATTTTTTTTTCTCACTAATTTTATATATATGT
rJMSF050D06+ TGGGGTGGACGCATGCCCTCAGAATTTTATTTTTTTTTCTCACTAATTTTATATATATGT
____________________________________________________________
consensus TGGGGTGGACGCATGCCCTCAGAATTTTATTTTTTTTTCTCACTAATTTTATATATATGT
. : . : . : . : . : . :
rJMSF044J05+ AAATATATGTTTATATATTC
rJMSF045F13+ AAATATATGTTTATATATTCATCATATATATAAAAGTGTTCATTCCCAAAGCTTTTACAC
rJMSF050D06+ AAATATATGTTTATATATTCATCATATATATAAAAGTGTTCATTCCCAAAGCTTTTACAC
____________________________________________________________
consensus AAATATATGTTTATATATTCATCATATATATAAAAGTGTTCATTCCCAAAGCTTTTACAC
. : . : . : . : . : . :
rJMSF045F13+ AAAAATGTCTACTACTGAGCCCAAATCCCATCAAAAATAGCAAAAGACTCAAACTTTCAC
rJMSF050D06+ AAAAATGTCTACTACTGAGCCCAAATCCCATCAAAAATAGCAAAAGACTCAAACTTTCAC
____________________________________________________________
consensus AAAAATGTCTACTACTGAGCCCAAATCCCATCAAAAATAGCAAAAGACTCAAACTTTCAC
. : . : . : . : . : . :
rJMSF045F13+ TGCATTTCTTATTTTCTTTCAATCCGCAATTTCATTTCACTGGTTAGGCTTGATTGATGC
rJMSF050D06+ TGCATTTCTTATTTTCTTTCAATCCGCAATTTCATTTCACTGGTTAGGCTTGATTGATGC
____________________________________________________________
consensus TGCATTTCTTATTTTCTTTCAATCCGCAATTTCATTTCACTGGTTAGGCTTGATTGATGC
. : . : . : . : . : . :
rJMSF045F13+ TGCCTGCGAGCTTTGGTTGTGAGCTTATGACCATTCCTTCAAATTCCCAAATCTTCACCA
rJMSF050D06+ TGCCTGCGAGCTTTGGTTGTGAGCTTATGACCATTCCTTCAAATTCCCAAATCTTCACCA
____________________________________________________________
consensus TGCCTGCGAGCTTTGGTTGTGAGCTTATGACCATTCCTTCAAATTCCCAAATCTTCACCA
. : . : . : . : . : . :
rJMSF045F13+ GAGATTGAGAGGGGTTATCATACTCCTTTAGGAGATTGAACGGTGGAGATTGTTGTGGCG
rJMSF050D06+ GAGATTGAGAGGGGTTATCATACTCCTTTAGGAGATTGAGCGGTGGAGATTGTTGTGGCG
____________________________________________________________
consensus GAGATTGAGAGGGGTTATCATACTCCTTTAGGAGATTGAGCGGTGGAGATTGTTGTGGCG
. : . : . : . : . : . :
rJMSF045F13+ TGAGGTGCCTTCCGGTCTGTGGAGGCAGGAGGCCAGCCATCATGCATGAAAGCATCTCAA
rJMSF050D06+ TGAGGTGCCTTCCGGTCTGTGGAGGCAGGAGGCCAGCCATCATGCATGAAAGCATCTCAA
____________________________________________________________
consensus TGAGGTGCCTTCCGGTCTGTGGAGGCAGGAGGCCAGCCATCATGCATGAAAGCATCTCAA
. : . : . : . : . : . :
rJMSF045F13+ GTCGGGGGACGAGTATATGATTTGGATCAGCGTCTACGAACGTTTAAGTTTCGTTATTAG
rJMSF050D06+ GTCGGGGGACGAGTATATGATTTGGATCAGCGTCTACGAACGTTTAAGTTTCGTTATTAG
____________________________________________________________
consensus GTCGGGGGACGAGTATATGATTTGGATCAGCGTCTACGAACGTTTAAGTTTCGTTATTAG
. : . : . : . : . : . :
rJMSF045F13+ TAGAAAATTGGTTAATCGTGAATTCAAGATAAAGTTAACTGTAGTATAATATTTGGTATA
rJMSF050D06+ TAGAAAATTGGTTAATCGTGAATTCAAGATAAAGTTAACTGTAGTATAATATTTGGTATA
____________________________________________________________
consensus TAGAAAATTGGTTAATCGTGAATTCAAGATAAAGTTAACTGTAGTATAATATTTGGTATA
. : . : . : . : . : . :
rJMSF045F13+ CCTAACATCTT
rJMSF050D06+ CCTAACATCTTTCTTCATTGGTTAACAAGACCTTAGACGTATTCATTCCAAACAAATGAA
____________________________________________________________
consensus CCTAACATCTTTCTTCATTGGTTAACAAGACCTTAGACGTATTCATTCCAAACAAATGAA
. : . : . : . : . : . :
rJMSF050D06+ TTTGTTCGATACCTTGTAGTAGTTTTTGGCAAATTATTTTGTGAATCCGGATCCAAAAAT
____________________________________________________________
consensus TTTGTTCGATACCTTGTAGTAGTTTTTGGCAAATTATTTTGTGAATCCGGATCCAAAAAT