clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF030C12 | Sequence | 634 | 003898 (2) | ref|XP_009607626.1| | 9e-72 | PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tomentosiform | 736 | 012772 (2) | ref|XP_011082884.1| | 1e-132 | PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Sesamum indicum] |
JMSF049M11 | Sequence | 651 | 003898 (2) | ref|XP_009607626.1| | 1e-62 | PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tomentosiform | 735 | 012772 (2) | ref|XP_011082884.1| | 2e-123 | PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF030C12+ ATGCCCCGCCACAGAAAATGCAATCCCACTTGATCCCTCCGGAGACCCCTCG
rJMSF049M11+ TCCGGAGACCCCTCG
____________________________________________________________
consensus ATGCCCCGCCACAGAAAATGCAATCCCACTTGATCCCTCCGGAGACCCCTCG
. : . : . : . : . : . :
rJMSF030C12+ ATCCATCTTTGTTTACTTCCGAGGTTTGTTTTATGATGTTGGTAATGACCCAGAAGGTGG
rJMSF049M11+ ATCCATCTTTGTTTACTTCCGAGGTTTGTTTTATGATGTTGGTAATGACCCAGAAGGTGG
____________________________________________________________
consensus ATCCATCTTTGTTTACTTCCGAGGTTTGTTTTATGATGTTGGTAATGACCCAGAAGGTGG
. : . : . : . : . : . :
rJMSF030C12+ CTACTATGCAAGAGGTGCCCGAGCTGCAGTGTGGGAGAATTTCAAGGACAATCCTCTCTT
rJMSF049M11+ CTACTATGCAAGAGGTGCCCGAGCTGCAGTGTGGGAGAATTTCAAGGACAATCCTCTCTT
____________________________________________________________
consensus CTACTATGCAAGAGGTGCCCGAGCTGCAGTGTGGGAGAATTTCAAGGACAATCCTCTCTT
. : . : . : . : . : . :
rJMSF030C12+ CGACATTTCTACCGAGCATCCAACAACTTACTATGAGGACATGCAGCGGGCTATCTTCTG
rJMSF049M11+ CGACATTTCTACCGAGCATCCAACAACTTACTATGAGGACATGCAGCGGGCTATCTTCTG
____________________________________________________________
consensus CGACATTTCTACCGAGCATCCAACAACTTACTATGAGGACATGCAGCGGGCTATCTTCTG
. : . : . : . : . : . :
rJMSF030C12+ CCTGTGCCCACTCGGGTGGGCTCCATGGAGCCCGAGATTGGTTGAAGCAGTAATATTCGG
rJMSF049M11+ CTTGTGCCCACTCGGGTGGGCTCCATGGAGCCCGAGATTGGTTGAAGCAGTAATATTCGG
____________________________________________________________
consensus CTTGTGCCCACTCGGGTGGGCTCCATGGAGCCCGAGATTGGTTGAAGCAGTAATATTCGG
. : . : . : . : . : . :
rJMSF030C12+ TTGCATCCCTGTTATTATTGCTGACGACATTGTCTTACCTTTTGCTGATGCAATCCCGTG
rJMSF049M11+ TTGCATCCCTGTTATTATTGCTGACGACATTGTCTTACCTTTTGCTGATGCAATCCCGTG
____________________________________________________________
consensus TTGCATCCCTGTTATTATTGCTGACGACATTGTCTTACCTTTTGCTGATGCAATCCCGTG
. : . : . : . : . : . :
rJMSF030C12+ GGAAGATATTGGGGTATTTGTTGCGGAGGAGGATGTACCAAAACTGGACACAATTCTCAC
rJMSF049M11+ GGAAGATATTGGGGTATTTGTTGCGGAGGAGGATGTACCAAAACTGGACACAATTCTCAC
____________________________________________________________
consensus GGAAGATATTGGGGTATTTGTTGCGGAGGAGGATGTACCAAAACTGGACACAATTCTCAC
. : . : . : . : . : . :
rJMSF030C12+ TTCCATTCGACCCGAGGAAATCTTGAGGAAGCAAAGATTGCTTGCAAACCCTTCAATGAA
rJMSF049M11+ TTCCATTCGACCCGAGGAAATCTTGAGGAAGCAAAGATTGCTTGCAAACCCTTCAATGAA
____________________________________________________________
consensus TTCCATTCGACCCGAGGAAATCTTGAGGAAGCAAAGATTGCTTGCAAACCCTTCAATGAA
. : . : . : . : . : . :
rJMSF030C12+ ACAGGCGATGTTGTTCCCACAGCCCGCTCAACCCGGGGATGCATTCCATCAAATCTTGAA
rJMSF049M11+ ACAGGCGATGTTGTTCCCACAGCCCGCTCAACCCGGGGATGCATTCCATCAAATCTTGAA
____________________________________________________________
consensus ACAGGCGATGTTGTTCCCACAGCCCGCTCAACCCGGGGATGCATTCCATCAAATCTTGAA
. : . : . : . : . : . :
rJMSF030C12+ CGGACTTGCTCGGAAGTTGCCACATGACGGGAGTGTTTACTTGGAACCCGGTGAAAAGGT
rJMSF049M11+ CGGGCTTGCTCGGAAGTTGCCACATGACGGGAGTGTTTACTTGGAACCCGGTGAAAAGGT
____________________________________________________________
consensus CGGGCTTGCTCGGAAGTTGCCACATGACGGGAGTGTTTACTTGGAACCCGGTGAAAAGGT
. : . : . : . : . : . :
rJMSF030C12+ CTTGAACTGGACCGCTGGTCCGGTGGGTGACCTGAAACCGTGGTAGAGGGAACTTTAATT
rJMSF049M11+ CTTGAACTGGACCGCTGGTCCGGTGGGTGACCTGAAACCGTGGTAGAGGGAACTTTAATT
____________________________________________________________
consensus CTTGAACTGGACCGCTGGTCCGGTGGGTGACCTGAAACCGTGGTAGAGGGAACTTTAATT
. : . : . : . : . : . :
rJMSF030C12+ TTGTACACAATTGAATCTTTACTATTGTCCTTGAACCTTAATTGCATGCTGCATTAGATC
rJMSF049M11+ TTGTACACAATTGAATCTTTACTATTGTCCTTGAACCTTAATTGCATGCTGCATTAGATC
____________________________________________________________
consensus TTGTACACAATTGAATCTTTACTATTGTCCTTGAACCTTAATTGCATGCTGCATTAGATC
. : . : . : . : . : . :
rJMSF030C12+ AGAGTTGTTCATTGTCATTT
rJMSF049M11+ AGAGTTGTTCATTGTCATTTTAAGAGTAACTGTGGAATATCAAATCTCAACTGGAAAAAA
____________________________________________________________
consensus AGAGTTGTTCATTGTCATTTTAAGAGTAACTGTGGAATATCAAATCTCAACTGGAAAAAA