Contig 012732:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009K01Sequence520012732 (5)gb|KJB74911.1|9e-64hypothetical protein B456_012G014200 [Gossypium raimondii]
JMSF035F14Sequence478018975732012732 (5)ref|XP_006365983.1|8e-105PREDICTED: potassium transporter 2-like isoform X1 [Solanum tuberosum] ref|XP_00
JMSF038J23Sequence627009579 (3)ref|XP_006365983.1|6e-75PREDICTED: potassium transporter 2-like isoform X1 [Solanum tuberosum] ref|XP_00670012732 (5)ref|XP_009773199.1|6e-83PREDICTED: potassium transporter 2 isoform X2 [Nicotiana sylvestris]
JMSF043F05Sequence813009579 (3)ref|XP_009597460.1|1e-131PREDICTED: potassium transporter 2 isoform X1 [Nicotiana tomentosiformis] ref|XP749012732 (5)ref|XP_006365983.1|4e-92PREDICTED: potassium transporter 2-like isoform X1 [Solanum tuberosum] ref|XP_00
JMSF051F19Sequence657009579 (3)ref|XP_008456930.1|5e-62PREDICTED: potassium transporter 2 [Cucumis melo] ref|XP_008456931.1| PREDICTED:721012732 (5)ref|XP_006365983.1|2e-88PREDICTED: potassium transporter 2-like isoform X1 [Solanum tuberosum] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF035F14+ GTCCCTTTCATCCCCCC
                      ____________________________________________________________
consensus GTCCCTTTCATCCCCCC
 
. : . : . : . : . : . :
rJMSF035F14+ AGCCGAGCGGTACCTCGTGGGGCGCGTTGGACCGCCCTCCCACCGNTCCTACAGGTGCAT
rJMSF051F19+ CTACAGGTGCAT
rJMSF038J23+ CTACAGGTGCAT
rJMSF043F05+ GACCGCCCTCCCACCGCTCCTACAGGTGCAT
                      ____________________________________________________________
consensus AGCCGAGCGGTACCTCGTGGGGCGCGTTGGACCGCCCTCCCACCGCTCCTACAGGTGCAT
 
. : . : . : . : . : . :
rJMSF035F14+ CGTGCGGTATGGCTACCGGGACGTTCACCAGGATGTAGACTTCTTCGAAACCGAACTCGT
rJMSF051F19+ CGTGCGGTATGGCTACCGGGACGTTCACCAGGATGTAGACTTCTTCGAAACCGAACTCGT
rJMSF038J23+ CGTGCGGTATGGCTACCGGGACGTTCACCAGGATGTAGACTTNTTNGAAACCGAACTCGT
rJMSF043F05+ CGTGCGGTATGGCTACCGGGACGTTCACCAGGATGTAGACTTCTTCGAAACCGAACTCGT
                      ____________________________________________________________
consensus CGTGCGGTATGGCTACCGGGACGTTCACCAGGATGTAGACTTCTTCGAAACCGAACTCGT
 
. : . : . : . : . : . :
rJMSF035F14+ CAGTAAGCTTGCTGATTTCATCCGCTACGACTGGTACAAGACGAACGGGATCATCACCTC
rJMSF051F19+ CAGTAAGCTTGCTGATTTCATCCGCTACGACTGGTACAAGACGAACGGGATCATCACCTC
rJMSF038J23+ CAGTAAGCTTGNTGATTTCATCCGCTNCGACTGGTACAAGACGAACGGGATCATCNCCTC
rJMSF043F05+ CAGTAAGCTTGCTGATTTCATCCGCTACGACTGGTACAAGACGAACGGGATCATCACCTC
                      ____________________________________________________________
consensus CAGTAAGCTTGCTGATTTCATCCGCTACGACTGGTACAAGACGAACGGGATCATCACCTC
 
. : . : . : . : . : . :
rJMSF035F14+ ACCGAACGACGACGATGGGTCTCGTTCTGGTGCATCGTCAAGCGAATACCGGTTAGCAGT
JMFN009K01- GTTAGCAGT
rJMSF051F19+ ACCGAACGACGACGATGGGTCTCGTTCTGGTGCATCGTCAAGCGAATACCGGTTAGCAGT
rJMSF038J23+ ACCGAACGACGACGATGGGTCTCGTTCTGGTGCATCGTCAAGCGAATACCGGTTAGCAGT
rJMSF043F05+ ACCGAACGACGACGATGGGTCTCGTTCTGGTGCATCGTCAAGCGAATACCGGTTAGCAGT
                      ____________________________________________________________
consensus ACCGAACGACGACGATGGGTCTCGTTCTGGTGCATCGTCAAGCGAATACCGGTTAGCAGT
 
. : . : . : . : . : . :
rJMSF035F14+ GATAGGAACCATGGCTTTCCCGGGCACACCCGCCTTTGAAATCGAGGAAACCGCCCAACC
JMFN009K01- GATAGGAACCATGGCTTTCCCGGGCACACCCGCCTTTGAAATCGAGGAAACCGCCCAACC
rJMSF051F19+ GATAGGAACCATGGCTTTCCCGGGCACACCCGCCTTTGAAATCGAGGAAACCGCCCAACC
rJMSF038J23+ GATAGGAACCATGGCTTTCCCGGGCACACCCGCCTTTGAAATCGAGGAAACCGCCCAACC
rJMSF043F05+ GATAGGAACCATGGCTTTCCCGGGCACACCCGCCTTTGAAATCGAGGAAACCGCCCAACC
                      ____________________________________________________________
consensus GATAGGAACCATGGCTTTCCCGGGCACACCCGCCTTTGAAATCGAGGAAACCGCCCAACC
 
. : . : . : . : . : . :
rJMSF035F14+ CGAGAGCGTTTCCTTCGGTTTCCCCACCGCCGAGAGCCTAACCGACATCATCGAGATGCA
JMFN009K01- CGAGAGCGTTTCCTTCGGTTTCCCCACCGCCGAGAGCCTAACCGACATCATCGAGATGCA
rJMSF051F19+ CGAGAGCGTTTCCTTCGGTTTCCCCACCGCCGAGAGCCTAACCGACATCATCGAGATGCA
rJMSF038J23+ CGAGAGCGTTTCCTTCGGTTTCCCCACCGCCGAGAGCCTAACCGACATCATCGAGATGCA
rJMSF043F05+ CGAGAGCGTTTCCTTCGGTTTCCCCACCGCCGAGAGCCTAACCGACATCATCGAGATGCA
                      ____________________________________________________________
consensus CGAGAGCGTTTCCTTCGGTTTCCCCACCGCCGAGAGCCTAACCGACATCATCGAGATGCA
 
. : . : . : . : . : . :
rJMSF035F14+ ACCAACCACAACAGCAGCATTAGCAGCAGAGAAAAGGGTGAGATTTGCTGTTGATGACTC
JMFN009K01- ACCAACCACAACAGCAGCATTAGCAGCAGAGAAAAGGGTGAGATTTGCTGTTGATGACTC
rJMSF051F19+ ACCAACCACAACAGCAGCATTAGCAGCAGAGAAAAGGGTGAGATTTGCTGTTGATGACTC
rJMSF038J23+ ACCAACCACAACAGCAGCATTAGCAGCAGAGAAAAGGGTGAGATTTGCTGTTGATGACTC
rJMSF043F05+ ACCAACCACAACAGCAGCATTAGCAGCAGAGAAAAGGGTGAGATTTGCTGTTGATGACTC
                      ____________________________________________________________
consensus ACCAACCACAACAGCAGCATTAGCAGCAGAGAAAAGGGTGAGATTTGCTGTTGATGACTC
 
. : . : . : . : . : . :
rJMSF035F14+ AGAACCAGACTCACACTCACACCAAGAAATGGACATTCAGCTTCAAGAAGAGCTGAGGGA
JMFN009K01- AGAACCAGACTCACACTCACACCAAGAAATGGACATTCAGCTTCAAGAAGAGCTGAGGGA
rJMSF051F19+ AGAACCAGACTCACACTCACACCAAGAAATGGACATTCAGCTTCAAGAAGAGCTGAGGGA
rJMSF038J23+ AGAACCAGACTCACACTCACACCAAGAAATGGACATTCAGCTTCAAGAAGAGCTGAGGGA
rJMSF043F05+ AGAACCAGACTCACACTCACACCAAGAAATGGACATTCAGCTTCAAGAAGAGCTGAGGGA
                      ____________________________________________________________
consensus AGAACCAGACTCACACTCACACCAAGAAATGGACATTCAGCTTCAAGAAGAGCTGAGGGA
 
. : . : . : . : . : . :
rJMSF035F14+ TCTCCACGAAGCCCGAGAAGCCGGGATTGCCTTCATTCTCGGGCACTCACACGTAAGAAC
JMFN009K01- TCTCCACGAAGCCCGAGAAGCCGGGATTGCCTTCATTCTCGGGCACTCACACGTAAGAAC
rJMSF051F19+ TCTCCACGAAGCCCGAGAAGCCGGGATTGCCTTCATTCTCGGGCACTCACACGTAAGAAC
rJMSF038J23+ TCTCCACGAAGCCCGAGAAGCCGGGATTGCCTTCATTCTCGGGCACTCACACGTAAGAAC
rJMSF043F05+ TCTCCACGAAGCCCGAGAAGCCGGGATTGCCTTCATTCTCGGGCACTCACACGTAAGAAC
                      ____________________________________________________________
consensus TCTCCACGAAGCCCGAGAAGCCGGGATTGCCTTCATTCTCGGGCACTCACACGTAAGAAC
 
. : . : . : . : . : . :
rJMSF035F14+ AAAGCAAGGCTCATCCATATTCAAGAGATTAGCCATCAACTTTGGGTACAATCTCCTGAA
JMFN009K01- AAAGCAAGGCTCATCCATATTCAAGAGATTAGCCATCAACTTTGGGTACAATCTCCTGAA
rJMSF051F19+ AAAGCAAGGCTCATCCATATTCAAGAGATTAGCCATCAACTTTGGGTACAATCTCCTGAA
rJMSF038J23+ AAAGCAAGGCTCATCCATATTCAAGAGATTAGCCATCAACTTTGGGTACAATCTCCTGAA
rJMSF043F05+ AAAGCAAGGCTCATCCATATTCAAGAGATTAGCCATCAACTTTGGGTACAATCTCCTGAA
                      ____________________________________________________________
consensus AAAGCAAGGCTCATCCATATTCAAGAGATTAGCCATCAACTTTGGGTACAATCTCCTGAA
 
. : . : . : . : . : . :
rJMSF035F14+ GAGAAACTGCAGAGGGCCAGATGTATCCCTTAAAGTCCCTCCAGTGTCCCTTCTTGAGGT
JMFN009K01- GAGAAACTGCAGAGGGCCAGATGTATCCCTTAAAGTCCCTCCAGTGTCCCTTCTTGAGGT
rJMSF051F19+ GAGAAACTGCAGAGGGCCAGATGTATCCCTTAAAGTCCCTCCAGTGTCCCTTCTTGAGGT
rJMSF038J23+ GAGAAACTGCAGAGGGCCAGATGTATCCCTTAAAGTCCCTCCAGTGTCCCTTCTTGAGGT
rJMSF043F05+ GAGAAACTGCAGAGGGCCAGATGTATCCCTTAAAGTCCCTCCAGTGTCCCTTCTTGAGGT
                      ____________________________________________________________
consensus GAGAAACTGCAGAGGGCCAGATGTATCCCTTAAAGTCCCTCCAGTGTCCCTTCTTGAGGT
 
. : . : . : . : . : . :
rJMSF035F14+ TGGGA-TGGTATATGTTGTCTGAGATGTAAA-TGATTGTAAGTTTTGCTTGTTTCTT
JMFN009K01- TGGGA-TGGTATATGTTGTCTGAGATGTAAA-TGATTGTAAGTTTTGCTTGTTTCTTTAC
rJMSF051F19+ TGGGA-TGGTATATGTTGTCTGAGATGTAAA-TGATTGTAAGTTTTGCTTGTTTCTTTAC
rJMSF038J23+ TGGGATTGGTATATGTTGTCTGAGATGTAAACTGATNGTAAGTTTTGCTTGTTTCTT
rJMSF043F05+ TGGGA-TGGTATATGTTGTCTGAGATGTAAA-TGATTGTAAGTTTTGCTTGTTTCTTTAC
                      ____________________________________________________________
consensus TGGGA-TGGTATATGTTGTCTGAGATGTAAA-TGATTGTAAGTTTTGCTTGTTTCTTTAC
 
. : . : . : . : . : . :
JMFN009K01- ACTTTAATCTACTGATCTGATGCCCTTTTCAAG
rJMSF051F19+ ACTTTAATCTACTGATCTGATGCCCTTTTCAAGATCTGCAAGAATGT
rJMSF043F05+ ACTTTAATCTACTGATCTGATGCCCTTTTCAAGATCTGCAAGAATGTTAACTGCTCAGAT
                      ____________________________________________________________
consensus ACTTTAATCTACTGATCTGATGCCCTTTTCAAGATCTGCAAGAATGTTAACTGCTCAGAT