Contig 012729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033B23Sequence567000706 (5)ref|XP_009627757.1|2e-84PREDICTED: mannosyl-oligosaccharide glucosidase GCS1-like isoform X2 [Nicotiana709012729 (2)ref|XP_004239205.1|6e-71PREDICTED: mannosyl-oligosaccharide glucosidase GCS1 [Solanum lycopersicum]
JMSF042L17Sequence795000706 (5)ref|XP_002279616.1|9e-93PREDICTED: mannosyl-oligosaccharide glucosidase GCS1 [Vitis vinifera] emb|CBI276782012729 (2)emb|CDP19898.1|1e-56unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042L17+ CT
                      ____________________________________________________________
consensus CT
 
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rJMSF042L17+ CCTGTAAAATAGCTCTTACAGTTAGTCGTTTTCCAGTATTTCTCATTTTAGATTTATCGT
                      ____________________________________________________________
consensus CCTGTAAAATAGCTCTTACAGTTAGTCGTTTTCCAGTATTTCTCATTTTAGATTTATCGT
 
. : . : . : . : . : . :
rJMSF042L17+ GATGTGGATTGACATGTTCACTTGCATACAGGAATCGTGGATATTAGAGAAACAGCTAGA
                      ____________________________________________________________
consensus GATGTGGATTGACATGTTCACTTGCATACAGGAATCGTGGATATTAGAGAAACAGCTAGA
 
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rJMSF042L17+ CCTGGTTTCAAATAGGAGCACGTTGTGGACAAATTTTGGTCTCAGGTCTCTTTCCAAAAC
                      ____________________________________________________________
consensus CCTGGTTTCAAATAGGAGCACGTTGTGGACAAATTTTGGTCTCAGGTCTCTTTCCAAAAC
 
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rJMSF042L17+ AAGGTGGTGATACAAACAACTTTTTTTAATGTATAAATGAAAACGCTTTCCCTTAGGCCT
                      ____________________________________________________________
consensus AAGGTGGTGATACAAACAACTTTTTTTAATGTATAAATGAAAACGCTTTCCCTTAGGCCT
 
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rJMSF033B23+ AGCTCCATT
rJMSF042L17+ GCATTTCATTTACAGAATATATTAATATACATGAGATCTCTCATATGTGACAGCTCCATT
                      ____________________________________________________________
consensus GCATTTCATTTACAGAATATATTAATATACATGAGATCTCTCATATGTGACAGCTCCATT
 
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rJMSF033B23+ TATATGAAGCGCAACACGGAGCATGATCCTCCATATTGGAGAGGGACGATTTGGATGCAA
rJMSF042L17+ TATATGAAGCGCAACACGGAGCATGATCCTCCATATTGGAGAGGGCCGATTTGGATTCAA
                      ____________________________________________________________
consensus TATATGAAGCGCAACACGGAGCATGATCCTCCATATTGGAGAGGGCCGATTTGGATTCAA
 
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rJMSF033B23+ TTTAATTACATGACTCTTGGCGCACTTCATCATTACTCCAGAGAGCCTGGACCATACAGA
rJMSF042L17+ TTTAATTACATGACTCTTGGCGCACTTCATCATTACTCCAGAGAGCCTGGACCATACAGA
                      ____________________________________________________________
consensus TTTAATTACATGACTCTTGGCGCACTTCATCATTACTCCAGAGAGCCTGGACCATACAGA
 
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rJMSF033B23+ GAGAAAGCCAGAACTATCTACCAAGAGCTAAGAAGCAATTTGATAAGAAATGTTGTCGAG
rJMSF042L17+ GAGAAAGCCAGAACTATCTACCAAGAGCTAAGAAGCAATTTGATAAGAAATGTTGTCGAG
                      ____________________________________________________________
consensus GAGAAAGCCAGAACTATCTACCAAGAGCTAAGAAGCAATTTGATAAGAAATGTTGTCGAG
 
. : . : . : . : . : . :
rJMSF033B23+ AACTATCACAAGACTGGGTATCTGTGGGAGCAATATGATCAGAAGAATGGGAAGGGAAAA
rJMSF042L17+ AACTATCACAAGACTGGGTATCTGTGGGAGCAATATGATCAGAAGAATGGGAAGGGAAAA
                      ____________________________________________________________
consensus AACTATCACAAGACTGGGTATCTGTGGGAGCAATATGATCAGAAGAATGGGAAGGGAAAA
 
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rJMSF033B23+ GGTGCGCGATTTACCGGCTGGACGGCCCTAGTGCTTCTGATCATGTCTGAATCTTACAAT
rJMSF042L17+ GGTGCGCGATTTACCGGCTGGACGGCCCTAGTGCTTCTGATCATGTCTGAATCTTACAAT
                      ____________________________________________________________
consensus GGTGCGCGATTTACCGGCTGGACGGCCCTAGTGCTTCTGATCATGTCTGAATCTTACAAT
 
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rJMSF033B23+ GAATGTTAGAGATGGCATATTTCTCAAGGCAGAGTTGAGGTTTCCCTTTAACATATAGAG
rJMSF042L17+ GAATGTTAGAGATGGCATATTTCTCAAGGCAGAGTTGAGGTTTCCCTTTAACATATAGAG
                      ____________________________________________________________
consensus GAATGTTAGAGATGGCATATTTCTCAAGGCAGAGTTGAGGTTTCCCTTTAACATATAGAG
 
. : . : . : . : . : . :
rJMSF033B23+ CGAGCTACATTTAACTATTTAGGTATGAGATCAATGTTAAGTAGATGCCTGCTTTATCTT
rJMSF042L17+ CGAGCTACATTTAACTATTTAGGTATGAGATCAATGTTAAGTAGATGCCTGCTTTATCTT
                      ____________________________________________________________
consensus CGAGCTACATTTAACTATTTAGGTATGAGATCAATGTTAAGTAGATGCCTGCTTTATCTT
 
. : . : . : . : . : . :
rJMSF033B23+ CTCTTCCTCCATTTCATACTTGTGGGGAATATACACACCAGAAC
rJMSF042L17+ CTCTTCCTCCATTTCATACTTGTGGGGAATATACACACCAGAACCAGTACATTTTGAATA
                      ____________________________________________________________
consensus CTCTTCCTCCATTTCATACTTGTGGGGAATATACACACCAGAACCAGTACATTTTGAATA