Contig 012728:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS050H08Sequence204012728 (2)
JMSF042H11Sequence148016853ref|XP_003599272.1|3e-23N-terminal acetyltransferase B complex subunit NAA25 [Medicago truncatula]876012728 (2)ref|XP_009788004.1|2e-59PREDICTED: phagocyte signaling-impaired protein isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS050H08+ GAGA
rJMSF042H11- TGAATAGTTTACAAGCTGCTAAATTGGGATCTGAGA
                      ____________________________________________________________
consensus TGAATAGTTTACAAGCTGCTAAATTGGGATCTGAGA
 
. : . : . : . : . : . :
JMFS050H08+ GAAAGGGATGGAGGGAGAGAGAGAGGAGACATTATTGTTTATAGTGTACATGGAAGAAAA
rJMSF042H11- GAAAGGGATGGAGGGAGAGAGAGAGGAGACATTATTGTTTATAGTGTACATGGAAGAAAA
                      ____________________________________________________________
consensus GAAAGGGATGGAGGGAGAGAGAGAGGAGACATTATTGTTTATAGTGTACATGGAAGAAAA
 
. : . : . : . : . : . :
JMFS050H08+ AATCAAGCCAAAAGAAAATCCAGAAAATGAAATTGCAAAGAAAGAAATGGCTTGAAATAA
rJMSF042H11- AATCAAGCCAAAAGAAAATCCAGAAAATGAAATTGCAAAGAAAGAAATGGCTTGAAATAA
                      ____________________________________________________________
consensus AATCAAGCCAAAAGAAAATCCAGAAAATGAAATTGCAAAGAAAGAAATGGCTTGAAATAA
 
. : . : . : . : . : . :
JMFS050H08+ TGAGCCAAAGCAATCTCCTTTTAACATGGGGAAAATTGAAGTACAAAATACCAGGCCGGC
rJMSF042H11- TGAGCCAAAGCAATCTCCTTTTAACATGGGGAAAATTGAAGTACAAAATACCAGGCCGGC
                      ____________________________________________________________
consensus TGAGCCAAAGCAATCTCCTTTTAACATGGGGAAAATTGAAGTACAAAATACCAGGCCGGC
 
. : . : . : . : . : . :
JMFS050H08+ GTTGTATTTAGCTCCACCGT
rJMSF042H11- GTTGTATTTAGCTCCACCGTGTGCCTAATCCATCGTTCATCTCAAACATCAAGCAATTGC
                      ____________________________________________________________
consensus GTTGTATTTAGCTCCACCGTGTGCCTAATCCATCGTTCATCTCAAACATCAAGCAATTGC
 
. : . : . : . : . : . :
rJMSF042H11- CTTGGTCGGTAGGCTATAAATGAGCTTTCAGCGCCTGTAGTGATTTTAGTTTTGATTCAC
                      ____________________________________________________________
consensus CTTGGTCGGTAGGCTATAAATGAGCTTTCAGCGCCTGTAGTGATTTTAGTTTTGATTCAC
 
. : . : . : . : . : . :
rJMSF042H11- AGATTTTGCTGAAATCGTGTAACGCCAAGACCTGACTAGTCGTGATTTTCCTTACGACAT
                      ____________________________________________________________
consensus AGATTTTGCTGAAATCGTGTAACGCCAAGACCTGACTAGTCGTGATTTTCCTTACGACAT
 
. : . : . : . : . : . :
rJMSF042H11- CACCGGGGCTCCAAGACTGCAATGCTTGGGAGATGCGGTCACCCAGCTCCATATCGTTTG
                      ____________________________________________________________
consensus CACCGGGGCTCCAAGACTGCAATGCTTGGGAGATGCGGTCACCCAGCTCCATATCGTTTG
 
. : . : . : . : . : . :
rJMSF042H11- TAGAAGACGTTAATTTGTTTATGATTTGAAAGGCCTTCCCGGGCCCTTCACTTTGTCCGT
                      ____________________________________________________________
consensus TAGAAGACGTTAATTTGTTTATGATTTGAAAGGCCTTCCCGGGCCCTTCACTTTGTCCGT
 
. : . : . : . : . : . :
rJMSF042H11- GAAGAGAAGAAAGTACGCTTTCCAGTTTTGCATCGTCTGATTTGCTGATTTGTTCCTTTA
                      ____________________________________________________________
consensus GAAGAGAAGAAAGTACGCTTTCCAGTTTTGCATCGTCTGATTTGCTGATTTGTTCCTTTA
 
. : . : . : . : . : . :
rJMSF042H11- ACCAGTTCAAAACCTCCTGTATAACGTTGCACACAGATTGGACCGACTCTTGTATTCCTT
                      ____________________________________________________________
consensus ACCAGTTCAAAACCTCCTGTATAACGTTGCACACAGATTGGACCGACTCTTGTATTCCTT
 
. : . : . : . : . : . :
rJMSF042H11- GAGAAAGCCGGGCGTTTGACTGCTCCGCGGGTCCGCCTTTCTTTTTTCTCTTTCCGGAAG
                      ____________________________________________________________
consensus GAGAAAGCCGGGCGTTTGACTGCTCCGCGGGTCCGCCTTTCTTTTTTCTCTTTCCGGAAG
 
. : . : . : . : . : . :
rJMSF042H11- GAACTACTGCCCGTGCACACGATTGTATTACCAAAGTATGCCAGGCCAAAGGTTCGGTTA
                      ____________________________________________________________
consensus GAACTACTGCCCGTGCACACGATTGTATTACCAAAGTATGCCAGGCCAAAGGTTCGGTTA
 
. : . : . : . : . : . :
rJMSF042H11- CCAACTGCACCACGGTGGGAAGATCACTGNCCGGGAGCTGAAGCATCCGGTCCAATTGAT
                      ____________________________________________________________
consensus CCAACTGCACCACGGTGGGAAGATCACTGNCCGGGAGCTGAAGCATCCGGTCCAATTGAT
 
. : . : . : . : . : . :
rJMSF042H11- CTTATCTTTTCCTCTATACACTTCTTCAGCAAAGAATTCACAAGTTGCCACATATTCGGT
                      ____________________________________________________________
consensus CTTATCTTTTCCTCTATACACTTCTTCAGCAAAGAATTCACAAGTTGCCACATATTCGGT