Contig 012723:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF020I02+                           TATGATGGGCAGTTTATAATGGGAGGGTTTCTCAATCTTAGAA
                      ____________________________________________________________
consensus                              TATGATGGGCAGTTTATAATGGGAGGGTTTCTCAATCTTAGAA
 
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rJMFF020I02+          TGAAGAAATGGCTGAGATCTTTGATCACTCGAAGCTGTGCCATCGTCCCGACCATCATAG
                      ____________________________________________________________
consensus             TGAAGAAATGGCTGAGATCTTTGATCACTCGAAGCTGTGCCATCGTCCCGACCATCATAG
 
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rJMFF020I02+          TGGCTGTGGTTTTCAACCGGTCCCAATCTTCTTTGGATTCTCTAAATGAGTGGCTTAATG
                      ____________________________________________________________
consensus             TGGCTGTGGTTTTCAACCGGTCCCAATCTTCTTTGGATTCTCTAAATGAGTGGCTTAATG
 
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rJMFF020I02+          TGGTTCAAGGTATGCAGATACCCTTCGCGATTATACCTCTGCTAACCTTGGTGTCCAACG
                      ____________________________________________________________
consensus             TGGTTCAAGGTATGCAGATACCCTTCGCGATTATACCTCTGCTAACCTTGGTGTCCAACG
 
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rJMFF025I12+                                                 AGAGGATGGTATGGGGCATAG
rJMFF020I02+          AGCGAATCATGGGAGTCTTCAAAATCGGGACCACCGTAGAGAGGATGGTATGGGGCATAG
                      ____________________________________________________________
consensus             AGCGAATCATGGGAGTCTTCAAAATCGGGACCACCGTAGAGAGGATGGTATGGGGCATAG
 
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rJMFF025I12+          CAGCCTTTGTAATCGTGGTAAACGGATATGTTATGCTTACCTTCTTTNTTTCTCAATTTG
rJMFF020I02+          CAGCCTTTGTAATCGTGGTAAACGGATATGTTATGCTTACCTTCTTTCTTTCTCAATTTG
rJMSF041L04+                                                                  TTTG
                      ____________________________________________________________
consensus             CAGCCTTTGTAATCGTGGTAAACGGATATGTTATGCTTACCTTCTTTCTTTCTCAATTTG
 
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rJMFF025I12+          ACGGGCTGCTCGTTGGTTTGGCAATGGGTTTTGTAGCTGCAGGATATGTAGCCTTCCTCG
rJMFF020I02+          ACGGGCTGCTCGTTGGTTTGGCAATGGGTTTTGTAGCTGCAGGATATGTAGCCTTCCTCG
rJMSF041L04+          ACGGGCTGCTCGTTGGTTTGGCAATGGGTTTTGTAGCTGCAGGATATGTAGCCTTCCTCG
                      ____________________________________________________________
consensus             ACGGGCTGCTCGTTGGTTTGGCAATGGGTTTTGTAGCTGCAGGATATGTAGCCTTCCTCG
 
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rJMFF025I12+          TCTACCTCATCGCTTGCCATGGCAGCCATTCTTCGCCGTGGTCTAGCAACACCAATGGAT
rJMFF020I02+          TCTACCTCATCGCTTGCCATGGCAGCCATTCTTCGCCGTGGTCTAGCAACACCAATGGAT
rJMSF041L04+          TCTACCTCATCGCTTGCCATGGCAGCCATTCTTCGCCGTGGTCTAGCAACACCAATGGAT
                      ____________________________________________________________
consensus             TCTACCTCATCGCTTGCCATGGCAGCCATTCTTCGCCGTGGTCTAGCAACACCAATGGAT
 
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rJMFF025I12+          TTTCGCACCTCGAAAGCTAGAATGAAGTTGATCTTTCGATTCATCAGAGGAAAATTTTGA
rJMFF020I02+          TTTCGCACCTCGAAAGCTAGAATGAAGTTGATCTTTCGATTCATCAGAGGAAAATTTTGA
rJMSF041L04+          TTTCGCACCTCGAAAGCTAGAATGAAGTTGATCTTTCGATTCATCAGAGGAAAATTTTGA
                      ____________________________________________________________
consensus             TTTCGCACCTCGAAAGCTAGAATGAAGTTGATCTTTCGATTCATCAGAGGAAAATTTTGA
 
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rJMFF025I12+          TCCTTGCAGGAAACTATGGGAATAGCAGAACTGTTATATTCAAGAACTGAGAATTAGGCA
rJMFF020I02+          TCCTTGCAGGAAACTATGGGAATAGCAGAACTGTTATATTCAAGAACTGAGAATTAGGCA
rJMSF041L04+          TCCTTGCAGGAAACTATGGGAATAGCAGAACTGTTATATTCAAGAACTGAGAATTAGGCA
                      ____________________________________________________________
consensus             TCCTTGCAGGAAACTATGGGAATAGCAGAACTGTTATATTCAAGAACTGAGAATTAGGCA
 
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rJMFF025I12+          TTGTAGAGATGACAGGCCATATGTTTTCATTTGACTAGATAGAATGGATTGGACTAATTT
rJMFF020I02+          TTGTAGAGATGACAGGCCATATGTTTTCATTTGACTAGATAGAATGGATTGGACTAATTT
rJMSF041L04+          TTGTAGAGATGACAGGCCATATGTTTTCATTTGACTAGATAGAATGGATTGGACTAATTT
                      ____________________________________________________________
consensus             TTGTAGAGATGACAGGCCATATGTTTTCATTTGACTAGATAGAATGGATTGGACTAATTT
 
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rJMFF025I12+          AGCCCAGTCTCGATCAGATCACGTTCAGATAGCTCTCTCAAAGGCGTTGCTGCATACACA
rJMFF020I02+          AGCCCAGTCTCGATCAGATCACGTTCAGATAGCTCTCTCAAAGGCGTTGCTGCATACACA
rJMSF041L04+          AGCCCAGTCTCGATCAGATCACGTTCAGATAGCTCTCTCAAAGGCGTTGCTGCATACACA
                      ____________________________________________________________
consensus             AGCCCAGTCTCGATCAGATCACGTTCAGATAGCTCTCTCAAAGGCGTTGCTGCATACACA
 
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rJMFF025I12+          TGATATA                                                     
rJMFF020I02+          TGATATA                                                     
rJMSF041L04+          TGATATAAACAGGTGTATTTTGTGTTTGTTGAATATAGAAAGTAAATTTATAAAATATTT
                      ____________________________________________________________
consensus             TGATATAAACAGGTGTATTTTGTGTTTGTTGAATATAGAAAGTAAATTTATAAAATATTT
 
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rJMSF041L04+          ACTCGTCGCTGAGTTTGTATGGTGTTGATCAATGCTAATACCGATTATATTGTAATTCAA
                      ____________________________________________________________
consensus             ACTCGTCGCTGAGTTTGTATGGTGTTGATCAATGCTAATACCGATTATATTGTAATTCAA
 
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rJMSF041L04+          AAAGTTTGGAGTTCTACCAGGTGCAATGAAGACAATGTACTCGGTACAAACTCGATACCT
                      ____________________________________________________________
consensus             AAAGTTTGGAGTTCTACCAGGTGCAATGAAGACAATGTACTCGGTACAAACTCGATACCT
 
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rJMSF041L04+          TTTTGCATTAATCTTTTGATTTTGTGGGGTGTAATCAGTACTAGTGTTGATCAACATCTT
                      ____________________________________________________________
consensus             TTTTGCATTAATCTTTTGATTTTGTGGGGTGTAATCAGTACTAGTGTTGATCAACATCTT
 
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rJMSF041L04+          AGAATTTTCTTAAACTTATATGAAGTATATTGAACATTTGAGTTCTGTGTAAATATTATT
                      ____________________________________________________________
consensus             AGAATTTTCTTAAACTTATATGAAGTATATTGAACATTTGAGTTCTGTGTAAATATTATT