Contig 012721:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014C24Sequence236000672 (3)729012721 (3)ref|XP_011097016.1|7e-70PREDICTED: uncharacterized membrane protein At4g09580 [Sesamum indicum]
JMSF024D16Sequence611000672 (3)ref|XP_006353628.1|2e-26PREDICTED: uncharacterized membrane protein At4g09580-like [Solanum tuberosum]307012721 (3)
JMSF041G19Sequence763000672 (3)ref|XP_009620443.1|8e-60PREDICTED: uncharacterized membrane protein At4g09580-like [Nicotiana tomentosi618012721 (3)ref|XP_006434610.1|1e-35hypothetical protein CICLE_v10002092mg [Citrus clementina] ref|XP_006434611.1| h

Alignment

This contig is upended


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rJMSF014C24+                     TCTTTCTAAATTACTTGGAAGGCCTATAGTTCACTCACTATGGCCTGAA
                      ____________________________________________________________
consensus                        TCTTTCTAAATTACTTGGAAGGCCTATAGTTCACTCACTATGGCCTGAA
 
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rJMSF014C24+          AAGTTGAGGTTTTTCCAATCAGAGATAGCCAAGCGCAGGGATAAATTACTCAACTACATG
                      ____________________________________________________________
consensus             AAGTTGAGGTTTTTCCAATCAGAGATAGCCAAGCGCAGGGATAAATTACTCAACTACATG
 
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rJMSF014C24+          CTTTTTTTGAGGGTAACTCCAACGTTGCCAAACCTTTTTATCAATTTGGCATCTCCTATA
rJMSF041G19+                                                    AATTTGGCATCTCCTATA
                      ____________________________________________________________
consensus             CTTTTTTTGAGGGTAACTCCAACGTTGCCAAACCTTTTTATCAATTTGGCATCTCCTATA
 
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rJMSF014C24+          GTGGATATACCATTCCACATTTTCTTTCTGGCCACGGTGATTGGTCTTATTCCTGCCTCA
rJMSF041G19+          GTGGATATACCATTCCACATTTTCTTTCTGGCCACGGTGATTGGTCTTATTCCTGCCTCA
                      ____________________________________________________________
consensus             GTGGATATACCATTCCACATTTTCTTTCTGGCCACGGTGATTGGTCTTATTCCTGCCTCA
 
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rJMSF014C24+          TTTATTACTGTCAGGGCTGGCCTTGCTCTTGGGGATTTAAAATCAGTCAAAGATCTGTAC
rJMSF041G19+          TTTATTACTGTCAGGGCTGGCCTTGCTCTTGGGGATTTAAAATCAGTCAAAGATCTGTAC
                      ____________________________________________________________
consensus             TTTATTACTGTCAGGGCTGGCCTTGCTCTTGGGGATTTAAAATCAGTCAAAGATCTGTAC
 
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rJMSF014C24+          GATTTCAAAACTTTGGTAGTTCTTTTCCTTATTGGTTCTATCATTATATTACCAACCCTT
rJMSF041G19+          GATTTCAAAACTTTGGTAGTTCTTTTCCTTATTGGTTCTATCATTATATTACCAACCCTT
                      ____________________________________________________________
consensus             GATTTCAAAACTTTGGTAGTTCTTTTCCTTATTGGTTCTATCATTATATTACCAACCCTT
 
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rJMSF024D16+            GAAGAGGAAGCGGATNTNCGAATGAAGCCATCATTGAGCATNGTTTACCCTCCAGAGC
rJMSF014C24+          TTGAAGAGGAAGCGGATATACGAATGAAGCCATCATTGAGCATTGTCTACCCTCCAGAGC
rJMSF041G19+          TTGAAGAGGAAGCGGATATACGAATGAAGCCATCATTGAGCATTGTCTACCCTCCAGAGC
                      ____________________________________________________________
consensus             TTGAAGAGGAAGCGGATATACGAATGAAGCCATCATTGAGCATTGTCTACCCTCCAGAGC
 
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rJMSF024D16+          CACACAAANTCATGNAGTTCTTANTTCTACCATCCGGATTNGAGANGGGAGCAATCCATG
rJMSF014C24+          CACACAAATTCATGTAGTTCTTATTTCTACCATTTGGATTCGAGATGGGAGCAATCCATG
rJMSF041G19+          CACACAAATTCATGTAGTTCTTATTTCTACCATTTGGATTCGAGATGGGAGCAATCCATG
                      ____________________________________________________________
consensus             CACACAAATTCATGTAGTTCTTATTTCTACCATTTGGATTCGAGATGGGAGCAATCCATG
 
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rJMSF024D16+          GAGGCNGACAGGNATGTAACTGATGTCAGNCAAGTGACCTTNGCTGGTCTNGGGTTCCAN
rJMSF014C24+          GAGGCCGACAGGAATGTAACTGATGTCAGACAAGTGACCTTTGCTGGTCTCGGGTTCCAA
rJMSF041G19+          GAGGCCGACAGGAATGTAACTGATGTCAGACAAGTGACCTTTGCTGGTCTCGGGTTCCAA
                      ____________________________________________________________
consensus             GAGGCCGACAGGAATGTAACTGATGTCAGACAAGTGACCTTTGCTGGTCTCGGGTTCCAA
 
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rJMSF024D16+          CAAACATTCGGTAAGATTAGAGATATGAGGNAANATACAGCCCGCTNNGTATTTATGTAT
rJMSF014C24+          CAAACATTCGGTAAGATTAGAGATATGAGGAAATATACAGCCCACTTTGTATTTATGTAT
rJMSF041G19+          CAAACATTCGGTAAGATTAGAGATATGAGGAAATATACAGCCCACTTTGTATTTATGTAT
                      ____________________________________________________________
consensus             CAAACATTCGGTAAGATTAGAGATATGAGGAAATATACAGCCCACTTTGTATTTATGTAT
 
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rJMSF024D16+          GNGAGTTNTACACANCCNGGAGGCAGGCGTNAATTTGGTTGATAGCAAACTAGAAGC   
rJMSF014C24+          GCGAGTTTTACACAACCTGGAGGCAGGTGTTAATTTGGTTGATAGCAAACTAGAAGCTGA
rJMSF041G19+          GCGAGTTTTACACAACCTGGAGGCAGGTGTTAATTTGGTTGATAGCAAACTAGAAGCTGA
                      ____________________________________________________________
consensus             GCGAGTTTTACACAACCTGGAGGCAGGTGTTAATTTGGTTGATAGCAAACTAGAAGCTGA
 
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rJMSF014C24+          TTGTAACATTTCTTGTGCCAGATACCTAGATATGAAAATGGTTTCTGATTCATACTAAAA
rJMSF041G19+          TTGTAACATTTCTTGTGCCAGATACCTAGATATGAAAATGGTTTCTGATTCATACTAAAA
                      ____________________________________________________________
consensus             TTGTAACATTTCTTGTGCCAGATACCTAGATATGAAAATGGTTTCTGATTCATACTAAAA
 
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rJMSF014C24+          AGTGACC                                                     
rJMSF041G19+          AGTGACCATGTAGCCATATGTTTTATTATATATATTACAATGAAAAGGAGGTGAGTCATC
                      ____________________________________________________________
consensus             AGTGACCATGTAGCCATATGTTTTATTATATATATTACAATGAAAAGGAGGTGAGTCATC