Contig 012704:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF039B14-                                                                     GG
                      ____________________________________________________________
consensus                                                                       GG
 
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JMSF039B14-           TCTATCCCTTCACACTCTCTATTAGATAATCAGAACCTCCGTCCACCGCCACACACCGCC
                      ____________________________________________________________
consensus             TCTATCCCTTCACACTCTCTATTAGATAATCAGAACCTCCGTCCACCGCCACACACCGCC
 
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JMSF039B14-           TTATCTATACCCCGGACGTATTTTATACGCCACTTTCACATTCCTCAAGCTCTCTATTTC
                      ____________________________________________________________
consensus             TTATCTATACCCCGGACGTATTTTATACGCCACTTTCACATTCCTCAAGCTCTCTATTTC
 
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JMSF039B14-           ATTCCTCTAAACGCAATCAATCAAGAAAAGAAAAAAAAATCGAAGAACAATGTTTAGGCA
                      ____________________________________________________________
consensus             ATTCCTCTAAACGCAATCAATCAAGAAAAGAAAAAAAAATCGAAGAACAATGTTTAGGCA
 
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JMSF039B14-           GTTATCGAACAGAGTTCTAGGGCTGGGCTCCCAGCGAATTGCGGCGGAAAGGGCGGTGGG
                      ____________________________________________________________
consensus             GTTATCGAACAGAGTTCTAGGGCTGGGCTCCCAGCGAATTGCGGCGGAAAGGGCGGTGGG
 
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JMSF039B14-           TTTGCCGCGGCTCTACCACGAGAGGGTGGTGGACTACTACAACAACCCCCGCAACGTTGG
rJMSF039B14+            TGCCGCGGCTCTACCACGAGAGGGTGGTGGANTACTACAACAACCCCCGCAACGTTGG
                      ____________________________________________________________
consensus             TTTGCCGCGGCTCTACCACGAGAGGGTGGTGGACTACTACAACAACCCCCGCAACGTTGG
 
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JMSF039B14-           CTCCTTCGACAAGAATGACCCGACGGTCGGCACGGGGTTGGTCGGCGCCCCGGCCTGCGG
rJMSF039B14+          CTCNTTCGACAAGAATGACCCGACGGTCGGCACGGGGTTGGTCGGCGCCCCGGCCTGCGG
                      ____________________________________________________________
consensus             CTCCTTCGACAAGAATGACCCGACGGTCGGCACGGGGTTGGTCGGCGCCCCGGCCTGCGG
 
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JMSF039B14-           CGACGTGATGAAGCTCCAGATTAAGGTCGATGATGAGACTGGAAAGATCGTCGATGCTTG
rJMSF039B14+          CGACGTGATGAAGCTCCAGATTAAGGTCGATGATGAGACTGGAAAGATCGTCGATGCTTG
                      ____________________________________________________________
consensus             CGACGTGATGAAGCTCCAGATTAAGGTCGATGATGAGACTGGAAAGATCGTCGATGCTTG
 
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JMSF039B14-           TTTCAAGACCTTCGGATGTGGCTCTGCTATCGCTTCCTCATCTGTTGCAACAGAGTGGGT
rJMSF039B14+          TTTCAAGACCTTCGGATGTGGCTCTGCTATCGCTTCCTCATCTGTTGCAACAGAGTGGGT
                      ____________________________________________________________
consensus             TTTCAAGACCTTCGGATGTGGCTCTGCTATCGCTTCCTCATCTGTTGCAACAGAGTGGGT
 
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JMSF039B14-           GAAGGGAAAGCAAATGGAGGAAGTGCTATCCATCAAGAATACGGAAATTGCAAAACATCT
rJMSF039B14+          GAAGGGAAAGCAAATGGAGGAAGTGCTATCCATCAAGAATACGGAAATTGCAAAACATCT
                      ____________________________________________________________
consensus             GAAGGGAAAGCAAATGGAGGAAGTGCTATCCATCAAGAATACGGAAATTGCAAAACATCT
 
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JMSF039B14-           CTCTCTCCCTCCCGTTAAACTCCACTGTAGCATGCTCGCTGAGGATGCAATAAAGGCTGC
rJMSF039B14+          CTCTCTCCCTCCCGTTAAACTCCACTGTAGCATGCTCGCTGAGGATGCAATAAAGGCTGC
                      ____________________________________________________________
consensus             CTCTCTCCCTCCCGTTAAACTCCACTGTAGCATGCTCGCTGAGGATGCAATAAAGGCTGC
 
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JMSF039B14-           CGTAAAGGATTATGAGGC                                          
rJMSF039B14+          CGTAAAGGATTATGAGGCAAAACGTGCAAGCACANTGCCAAGTGATGCGACTACTGCTTG
                      ____________________________________________________________
consensus             CGTAAAGGATTATGAGGCAAAACGTGCAAGCACANTGCCAAGTGATGCGACTACTGCTTG
 
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rJMSF039B14+          ATAGAGATCGAGTTCAATCGAGACCATGATCTCTGAACAATATAACCAACAATTATGTTG
                      ____________________________________________________________
consensus             ATAGAGATCGAGTTCAATCGAGACCATGATCTCTGAACAATATAACCAACAATTATGTTG
 
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rJMSF039B14+          ATAGTGAGTNTGAATAAAGCACTATATTATATGCANGTATATAGGCTTTCCATCTGAAAT
                      ____________________________________________________________
consensus             ATAGTGAGTNTGAATAAAGCACTATATTATATGCANGTATATAGGCTTTCCATCTGAAAT
 
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rJMSF039B14+          AAGCACAATATATATATATATATATATATAGTTGTGTGAACCATCAGTTACCTGTGTCAT
                      ____________________________________________________________
consensus             AAGCACAATATATATATATATATATATATAGTTGTGTGAACCATCAGTTACCTGTGTCAT
 
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rJMSF039B14+          TTACAATCCCTTGTATTGTTGTATGTTAGATCCTGGGGTTGTACTGCTACCTTAAAAATA
                      ____________________________________________________________
consensus             TTACAATCCCTTGTATTGTTGTATGTTAGATCCTGGGGTTGTACTGCTACCTTAAAAATA