Contig 012687:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF036J08+                                                                CAACAG
                      ____________________________________________________________
consensus                                                                   CAACAG
 
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rJMSF036J08+          TTATGCGAAATGGGACCAACCAGGCGGCCATGTTCACAGCCAAGAATGCATTTGATACAG
                      ____________________________________________________________
consensus             TTATGCGAAATGGGACCAACCAGGCGGCCATGTTCACAGCCAAGAATGCATTTGATACAG
 
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rJMSF036J08+          TATTGTGGAAGAAACATGAAGGTGATGGGAATGTCCTTCAGCCATGGCAGTCTATGATTT
                      ____________________________________________________________
consensus             TATTGTGGAAGAAACATGAAGGTGATGGGAATGTCCTTCAGCCATGGCAGTCTATGATTT
 
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rJMSF036J08+          CCGGTTTCCTTGCAGGGACAGCTGGTCCTATATGCACTGGACCTTTCGACGTCGTGAAAA
                      ____________________________________________________________
consensus             CCGGTTTCCTTGCAGGGACAGCTGGTCCTATATGCACTGGACCTTTCGACGTCGTGAAAA
 
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rJMSF036J08+          CGAGGCTGATGGCTCAAAGCCGATCAGGGGGTGATTTGAAGTACAGAGGAATGTTTCATG
                      ____________________________________________________________
consensus             CGAGGCTGATGGCTCAAAGCCGATCAGGGGGTGATTTGAAGTACAGAGGAATGTTTCATG
 
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rJMSF036J08+          CCATCTCAACTATATACACCGAAGAAGGTATACGTGCTTTGTGGAAGGGGTTACTTCCCC
                      ____________________________________________________________
consensus             CCATCTCAACTATATACACCGAAGAAGGTATACGTGCTTTGTGGAAGGGGTTACTTCCCC
 
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rJMFF010I08+                                     CCATTGTGTGGGCTGTTTCTGACCAAGTGATTG
rJMSF036J08+          GGCTTATGAGGATCCCGCCTGGACAGGCCATTGTGTGGGCTGTTTCTGACCAAGTGATTG
                      ____________________________________________________________
consensus             GGCTTATGAGGATCCCGCCTGGACAGGCCATTGTGTGGGCTGTTTCTGACCAAGTGATTG
 
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rJMFF010I08+          GTTTGTATGAGAGAAGACATATACAAAACGCTGCGCTATAGCCTATAGGTAGCTCGACAA
rJMSF036J08+          GTTTGTATGAGAGAAGACATATACAAAACGCTGCGCTATAGCCTATAGGTAGCTCGACAA
                      ____________________________________________________________
consensus             GTTTGTATGAGAGAAGACATATACAAAACGCTGCGCTATAGCCTATAGGTAGCTCGACAA
 
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rJMFF010I08+          TTACTCCACATTTCTCCTCTTTTTCTTGTGGATTGTAGTTCCATTCTTTGGCAAAAGCGT
rJMSF036J08+          TTACTCCACATTTCTCCTCTTTTTCTTGTGGATTGTAGTTCCATTCTTTGGCAAAAGCGT
                      ____________________________________________________________
consensus             TTACTCCACATTTCTCCTCTTTTTCTTGTGGATTGTAGTTCCATTCTTTGGCAAAAGCGT
 
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rJMFF010I08+          GCTAGCTGTTTTGGCCACTTTAGATTCCCTTAAATTAGTGGTAATGTCGAGTGAGGGACA
rJMSF036J08+          GCTAGCTGTTTTGGCCACTTTAGATTCCCTTAAATTAGTGGTAATGTCGAGTGAGGGACA
                      ____________________________________________________________
consensus             GCTAGCTGTTTTGGCCACTTTAGATTCCCTTAAATTAGTGGTAATGTCGAGTGAGGGACA
 
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rJMFF010I08+          GTTCTCTTGTCCCTGGCAAAATGGTATGTGACTAGGCTGCACTGAGACTTCCTAAGTTTT
rJMSF036J08+          GTTCTCTTGTCCCTGGCAAAATGGTATGTGACTAGGCTGCACTGAGACTTCCTAAGTTTT
                      ____________________________________________________________
consensus             GTTCTCTTGTCCCTGGCAAAATGGTATGTGACTAGGCTGCACTGAGACTTCCTAAGTTTT
 
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rJMFF010I08+          GCTTGGAGCACCTGTTTCTTAGAGGCTCAATAGAAGACTATAGGATTGCTGTATTGTTTG
rJMSF036J08+          GCTTGGAGCACCTGTTTCTTAGAGGCTCAATAGAAGACTATAGGATTGCTGTATTGTTTG
                      ____________________________________________________________
consensus             GCTTGGAGCACCTGTTTCTTAGAGGCTCAATAGAAGACTATAGGATTGCTGTATTGTTTG
 
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rJMFF010I08+          TTTTTTAAATCAACAATAAGAAAT                                    
rJMSF036J08+          TTTTTTAAATCAACAATAAGAAATTTTGTTCGAAACAATGAGGTGGAGTTAAACAACAAT
                      ____________________________________________________________
consensus             TTTTTTAAATCAACAATAAGAAATTTTGTTCGAAACAATGAGGTGGAGTTAAACAACAAT