Contig 012678:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005E05Sequence513013448 (3)ref|XP_006361102.1|8e-47PREDICTED: aspartic proteinase nepenthesin-1-like [Solanum tuberosum]723012678 (2)ref|XP_009623946.1|1e-91PREDICTED: aspartic proteinase nepenthesin-1-like [Nicotiana tomentosiformis]
JMSF034L07Sequence622013448 (3)ref|XP_006361102.1|1e-65PREDICTED: aspartic proteinase nepenthesin-1-like [Solanum tuberosum]690012678 (2)ref|XP_009623946.1|5e-89PREDICTED: aspartic proteinase nepenthesin-1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF005E05+                                                          CAGCGGCAAAAG
                      ____________________________________________________________
consensus                                                             CAGCGGCAAAAG
 
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rJMFF005E05+          CAGCCCGTTAGTTATGGAGACCGGCGAAGATTCCGGCGATAAAATCGGGAACCTGAGCCG
rJMSF034L07+                                        TTCCGGCGATAAAATCGGGAACCTGAGCCG
                      ____________________________________________________________
consensus             CAGCCCGTTAGTTATGGAGACCGGCGAAGATTCCGGCGATAAAATCGGGAACCTGAGCCG
 
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rJMFF005E05+          TACGCCGTTGCTGAAAAACCCTCAGGTGGCCGGCAGAGACGCATTGTCGGTGTATTACTA
rJMSF034L07+          TACGCCGTTGCTGAAAAACCCTCAGGTGGCCGGCAGAGACGCATTGTCGGTGTATTACTA
                      ____________________________________________________________
consensus             TACGCCGTTGCTGAAAAACCCTCAGGTGGCCGGCAGAGACGCATTGTCGGTGTATTACTA
 
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rJMFF005E05+          CGTTAGCCTGAGGAAAATCACTGTCGGAGCCCAAAAACTGAAGATCCCATACAAGTACCT
rJMSF034L07+          CGTTAGCCTGAGGAAAATCACTGTCGGAGCCCAAAAACTGAAGATCCCATACAAGTACCT
                      ____________________________________________________________
consensus             CGTTAGCCTGAGGAAAATCACTGTCGGAGCCCAAAAACTGAAGATCCCATACAAGTACCT
 
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rJMFF005E05+          CTCGCCGGATTCACAGGGCAACGGCGGCGCAATCGTGGATTCCGGCACGACCTTCACGTT
rJMSF034L07+          CTCGCCGGATTCACAGGGCAACGGCGGCGCAATCGTGGATTCCGGCACGACCTTCACGTT
                      ____________________________________________________________
consensus             CTCGCCGGATTCACAGGGCAACGGCGGCGCAATCGTGGATTCCGGCACGACCTTCACGTT
 
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rJMFF005E05+          CTTGACCCACGACGTATTCCAGCTCGTCCAGAACGCGTTCCTCACTCAAGTCAAAACCTA
rJMSF034L07+          CTTGACCCACGACGTATTCCAGCTCGTCCAGAACGCGTTCCTCACTCAAGTCAAAACCTA
                      ____________________________________________________________
consensus             CTTGACCCACGACGTATTCCAGCTCGTCCAGAACGCGTTCCTCACTCAAGTCAAAACCTA
 
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rJMFF005E05+          CCCGCGAGCCGGAAAACTGGAGAGCATTACCGGGCTGCGCCCGTGCTTCAATATCTCCGG
rJMSF034L07+          CCCGCGAGCCGGAAAACTGGAGAGCATTACCGGGCTGCGCCCGTGCTTCAATATCTCCGG
                      ____________________________________________________________
consensus             CCCGCGAGCCGGAAAACTGGAGAGCATTACCGGGCTGCGCCCGTGCTTCAATATCTCCGG
 
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rJMFF005E05+          CCACCGCACAATAGACATGCCGGATATGAAGTTCCATTTCAAGGGAGGCGCAGAAATGGC
rJMSF034L07+          CCACCGCACAATAGACATGCCGGATATGAAGTTCCATTTCAAGGGAGGCGCAGAAATGGC
                      ____________________________________________________________
consensus             CCACCGCACAATAGACATGCCGGATATGAAGTTCCATTTCAAGGGAGGCGCAGAAATGGC
 
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rJMFF005E05+          GCTGCCACTGGCAAACTACTTCACCATTGTCGGAACTGATAGCGTCTGCTTGACTCTGGT
rJMSF034L07+          GCTGCCACTGGCAAACTACTTCACCATTGTCGGAACTGATAGCGTCTGCTTGACTCTGGT
                      ____________________________________________________________
consensus             GCTGCCACTGGCAAACTACTTCACCATTGTCGGAACTGATAGCGTCTGCTTGACTCTGGT
 
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rJMFF005E05+          GACGGACAGCTTCGGCCCGGAGTTGCCCGCCGGACCGGCGATCATTCTGGGGAATTTCCA
rJMSF034L07+          GACGGACAGCTTCGGCCCGGAGTTGCCCGCCGGACCGGCGATCATTCGGGGGAATTTCCA
                      ____________________________________________________________
consensus             GACGGACAGCTTCGGCCCGGAGTTGCCCGCCGGACCGGCGATCATTCTGGGGAATTTCCA
 
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rJMFF005E05+          GATGCAGAATTTCTACGTGGAGTATGATCTGAAGAATGAGAAGTTGGGATTCCGGCGACA
rJMSF034L07+          GATGCAGAATTTCTACGTGGAGTATGATCTGAAGAATGAGAAGTTGGGATTCCGGCGACA
                      ____________________________________________________________
consensus             GATGCAGAATTTCTACGTGGAGTATGATCTGAAGAATGAGAAGTTGGGATTCCGGCGACA
 
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rJMFF005E05+          ATTATGCAAGTGATTCTGGAATTTTTTTTTTAAAAAAAGTTTAGGGGTCCAAACCAAATT
rJMSF034L07+          ATTATGCAAGTGATTCTGGAATTTTTTTTTTAAAAAAAGTTTAGGGGTCCAAACCAAATT
                      ____________________________________________________________
consensus             ATTATGCAAGTGATTCTGGAATTTTTTTTTTAAAAAAAGTTTAGGGGTCCAAACCAAATT
 
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rJMFF005E05+          ATGCAATTTCTTAGCCTTGTTGTTGTAAATTTTATTTTTTATTT                
rJMSF034L07+          ATGCAATTTCTTAGCCTTGTTGTTGTAAATTTTATTTTTTATTTTGAAAAATTACATTTT
                      ____________________________________________________________
consensus             ATGCAATTTCTTAGCCTTGTTGTTGTAAATTTTATTTTTTATTTTGAAAAATTACATTTT