Contig 012653:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028M10Sequence646009532 (3)ref|XP_009628015.1|2e-56PREDICTED: putative phagocytic receptor 1b isoform X1 [Nicotiana tomentosiformi738012653 (3)gb|KHG09925.1|6e-83Putative phagocytic receptor 1b [Gossypium arboreum]
JMSF036I05Sequence646009532 (3)ref|XP_009628015.1|4e-62PREDICTED: putative phagocytic receptor 1b isoform X1 [Nicotiana tomentosiformi709012653 (3)gb|KHG09925.1|1e-83Putative phagocytic receptor 1b [Gossypium arboreum]
JMSF046D06Sequence762009532 (3)ref|XP_009628015.1|6e-54PREDICTED: putative phagocytic receptor 1b isoform X1 [Nicotiana tomentosiformi695012653 (3)ref|XP_009782694.1|6e-60PREDICTED: putative phagocytic receptor 1b isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036I05+ GTGGATATTCTTGCCTCGCCCTCACTATTATTTG
rJMSF028M10+ TCGCCCTCACTATTATTTG
                      ____________________________________________________________
consensus GTGGATATTCTTGCCTCGCCCTCACTATTATTTG
 
. : . : . : . : . : . :
rJMSF036I05+ GTGGGATTCTCGGGAAGGGTATGGGGTTTGAGTTTCAAGCCCCGTGTCGCACCACAAAGT
rJMSF046D06+ CCCCGTGTCGCACCACAAAGT
rJMSF028M10+ GTGGGATTCTCGGGAAGGGTATGGGGTTTGAGTTTCAAGCCCCGTGTCGCACCACAAAGT
                      ____________________________________________________________
consensus GTGGGATTCTCGGGAAGGGTATGGGGTTTGAGTTTCAAGCCCCGTGTCGCACCACAAAGT
 
. : . : . : . : . : . :
rJMSF036I05+ GTCCTAGAGATATTCCACCGTTGCGGTGGTACAGGAGTGCGATTATTCAGATGGCATTAG
rJMSF046D06+ GTCCTAGAGATATTCCACCGTTGCGGTGGTACAGGAGTGCGATTATTCAGATGGCATTAG
rJMSF028M10+ GTCCTAGAGATATTCCACCGTTGCGGTGGTACAGGAGTGCGATTATTCAGATGGCATTAG
                      ____________________________________________________________
consensus GTCCTAGAGATATTCCACCGTTGCGGTGGTACAGGAGTGCGATTATTCAGATGGCATTAG
 
. : . : . : . : . : . :
rJMSF036I05+ CGGGATTTCTGCC-TTTTTTCGTTATGTACATCGAGCTTTATTATGTATTTGCCAGCGTG
rJMSF046D06+ CGGGATTTCTGCCTTTTTTTCGTTATGTACATCGAGCTTTATTATGTATTTGCCAGCGTG
rJMSF028M10+ CGGGATTTCTGCC-TTTTTTCGTTATGTACATCGAGCTTTATTATGTATTTGCCAGCGTG
                      ____________________________________________________________
consensus CGGGATTTCTGCC-TTTTTTCGTTATGTACATCGAGCTTTATTATGTATTTGCCAGCGTG
 
. : . : . : . : . : . :
rJMSF036I05+ TGGGGCCACCGGGTGTACACGATATATGGCGTCCTCTTCGTTGTCTTCATACTTCTTTTA
rJMSF046D06+ TGGGGCCACCGGGTGTACACGATATATGGCGTCCTCTTCGTTGTCTTCATACTTCTTTTA
rJMSF028M10+ TGGGGCCACCGGGTGTACACGATATATGGCGTCCTCTTCGTTGTCTTCATACTTCTTTTA
                      ____________________________________________________________
consensus TGGGGCCACCGGGTGTACACGATATATGGCGTCCTCTTCGTTGTCTTCATACTTCTTTTA
 
. : . : . : . : . : . :
rJMSF036I05+ ACTGTAACTGCTCTCGTGTCCATTGCTCTCACTTACTTCCAGCTCGTTGCTGAAGATCAC
rJMSF046D06+ ACTGTAACTGCTCTCGTGTCCATTGCTCTCACTTACTTCCAGCTCGTTGCTGAAGATCAC
rJMSF028M10+ ACTGTAACTGCTCTCGTGTCCATTGCTCTCACTTACTTCCAGCTCGTTGCTGAAGATCAC
                      ____________________________________________________________
consensus ACTGTAACTGCTCTCGTGTCCATTGCTCTCACTTACTTCCAGCTCGTTGCTGAAGATCAC
 
. : . : . : . : . : . :
rJMSF036I05+ AAATGGTGGTGGAGGTCGTTTCTTTGTGGTGGATCTACCGGGCTATACATATTCGGCTAT
rJMSF046D06+ AAATGGTGGTGGAGGTCGTTTCTTTGTGGTGGATCTACCGGGCTATACATATTCGGCTAT
rJMSF028M10+ AAATGGTGGTGGAGGTCGTTTCTTTGTGGTGGATCTACCGGGCTATACATATTCGGCTAT
                      ____________________________________________________________
consensus AAATGGTGGTGGAGGTCGTTTCTTTGTGGTGGATCTACCGGGCTATACATATTCGGCTAT
 
. : . : . : . : . : . :
rJMSF036I05+ GCTATATACTACTACATGCAACGATCAAACATGAAAGGCTTCATGCAGATCTCTTTCTTC
rJMSF046D06+ GCTATATACTACTACATGCAACGATCAAACATGAAAGGCTTCATGCAGATCTCTTTCTTC
rJMSF028M10+ GCTATATACTACTACATGCAACGATCAAACATGAAAGGCTTCATGCAGATCTCTTTCTTC
                      ____________________________________________________________
consensus GCTATATACTACTACATGCAACGATCAAACATGAAAGGCTTCATGCAGATCTCTTTCTTC
 
. : . : . : . : . : . :
rJMSF036I05+ TTCGGGTACATGGCATGTATTAGCTATGGCGTCTTTCTCATGTTGGGCGCGGTGGGGTAT
rJMSF046D06+ TTCGGGTACATGGCATGTATTAGCTATGGCGTCTTTCTCATGTTGGGCGCGGTGGGGTAT
rJMSF028M10+ TTCGGGTACATGGCATGTATTAGCTATGGCGTCTTTCTCATGTTGGGCGCGGTGGGGTAT
                      ____________________________________________________________
consensus TTCGGGTACATGGCATGTATTAGCTATGGCGTCTTTCTCATGTTGGGCGCGGTGGGGTAT
 
. : . : . : . : . : . :
rJMSF036I05+ CGTGCCTCGTTGCTATTTGTTCGTCATATTTACAGCTCTATCAAATGTGAGTAGTTGCCA
rJMSF046D06+ CGTGCCTCGTTGCTATTTGTTCGTCATATTTACAGCTCTATCAAATGTGAGTAGTTGCCA
rJMSF028M10+ CGTGCCTCGTTGCTATTTGTTCGTCATATTTACAGCTCTATCAAATGTGAGTAGTTGCCA
                      ____________________________________________________________
consensus CGTGCCTCGTTGCTATTTGTTCGTCATATTTACAGCTCTATCAAATGTGAGTAGTTGCCA
 
. : . : . : . : . : . :
rJMSF036I05+ TACTTTGGGTCTTGGTTTTGTAGAGTCAATCAGCTGGTTTGGTTGAAGCCTTGAAATTGT
rJMSF046D06+ TACTTTGGGTCTTGGTTTTGTAGAGTCAATCAGCTGGTTTGGTTGAAGCCTTGAAATTGT
rJMSF028M10+ TACTTTGGGTCTTGGTTTTGTAGAGTCAATCAGCTGGTTTGGTTGAAGCCTTGAAATTGT
                      ____________________________________________________________
consensus TACTTTGGGTCTTGGTTTTGTAGAGTCAATCAGCTGGTTTGGTTGAAGCCTTGAAATTGT
 
. : . : . : . : . : . :
rJMSF036I05+ TAAAAGGGTGAAGAAGTGGAGTATTGGGTGTATACTTTGGACTAACAAATATACAGAGAT
rJMSF046D06+ TAAAAGGGTGAAGAAGTGGAGTATTGGGTGTATACTTTGGACTAACAAATATACAGAGAT
rJMSF028M10+ TAAAAGGGTGAAGAAGTGGAGTATTGGGTGTATACTTTGGACTAACAAATATACAGAGAT
                      ____________________________________________________________
consensus TAAAAGGGTGAAGAAGTGGAGTATTGGGTGTATACTTTGGACTAACAAATATACAGAGAT
 
. : . : . : . : . : . :
rJMSF036I05+ TGGGGGTAGT
rJMSF046D06+ TGGGGGTAGTTGAAGTATGTTAATACTCATAAATGATACTCTCTTTGTCCATT
rJMSF028M10+ TGGGGGTAGTTGAAGTATGTTAATACTCATAAATGATACTCTCTTTGTCCATTTGTCTAA
                      ____________________________________________________________
consensus TGGGGGTAGTTGAAGTATGTTAATACTCATAAATGATACTCTCTTTGTCCATTTGTCTAA