Contig 012638:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026H05Sequence579012638 (2)ref|XP_009612250.1|9e-89PREDICTED: rhodanese-like domain-containing protein 10 [Nicotiana tomentosiform692012638 (2)ref|XP_004249076.1|2e-105PREDICTED: rhodanese-like domain-containing protein 10 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF026H05-                                       GTGGAGAAGAATGGCGGCAGTTCTACTGAACC
rJMSF026H05+                                      GTGGAGAAGAATGGCGGCAGTTCTACTGAACC
                      ____________________________________________________________
consensus                                         GTGGAGAAGAATGGCGGCAGTTCTACTGAACC
 
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JMSF026H05-           AGCTTCAACCAACCACTCTCAAGCATTCCAAGCAACCGCAACCATCTCTGTGCGCCACCC
rJMSF026H05+          AGCTTCAACCAACCACTCTCAAGCATTCCAAGCAACCGCAACCATCTCTGTGCGCCACCC
                      ____________________________________________________________
consensus             AGCTTCAACCAACCACTCTCAAGCATTCCAAGCAACCGCAACCATCTCTGTGCGCCACCC
 
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JMSF026H05-           CGCAACGGTCGGCAGCCGTGAGAGTGAACGCAACTTCCGGCAACGCCCAGCAGCTTATAC
rJMSF026H05+          CGCAACGGTCGGCAGCCGTGAGAGTGAACGCAACTTCCGGCAACGCCCAGCAGCTTATAC
                      ____________________________________________________________
consensus             CGCAACGGTCGGCAGCCGTGAGAGTGAACGCAACTTCCGGCAACGCCCAGCAGCTTATAC
 
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JMSF026H05-           AGTCCGGAACCGTACGCCCAATACCGCCCAAAGATGCCGCCACGGCCGTGGACTCCGAAG
rJMSF026H05+          AGTCCGGAACCGTACGCCCAATACCGCCCAAAGATGCCGCCACGGCCGTGGACTCCGAAG
                      ____________________________________________________________
consensus             AGTCCGGAACCGTACGCCCAATACCGCCCAAAGATGCCGCCACGGCCGTGGACTCCGAAG
 
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JMSF026H05-           GCTACATCTTGCTGGATATCCGGCCCGAATGGGAAAGAGCCAAGGCCCGAGTTTCGGGCT
rJMSF026H05+          GCTACATCTTGCTGGATATCCGGCCCGAATGGGAAAGAGCCAAGGCCCGAGTTTCGGGCT
                      ____________________________________________________________
consensus             GCTACATCTTGCTGGATATCCGGCCCGAATGGGAAAGAGCCAAGGCCCGAGTTTCGGGCT
 
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JMSF026H05-           CTCGCCACATTCCGCTGTTCGTCAAGGACCCGGATAATAGCCCCTTGGGTCTGCTCAAGA
rJMSF026H05+          CTCGCCACATTCCGCTGTTCGTCAAGGACCCGGATAATAGCCCCTTGGGTCTGCTCAAGA
                      ____________________________________________________________
consensus             CTCGCCACATTCCGCTGTTCGTCAAGGACCCGGATAATAGCCCCTTGGGTCTGCTCAAGA
 
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JMSF026H05-           AATGGGTGCATTTCGGTTATATTGGGCTGTGGACGGGCCAGAATATGACCATGTTCAACC
rJMSF026H05+          AATGGGTGCATTTCGGTTATATTGGGCTGTGGACGGGCCAGAATATGACCATGTTCAACC
                      ____________________________________________________________
consensus             AATGGGTGCATTTCGGTTATATTGGGCTGTGGACGGGCCAGAATATGACCATGTTCAACC
 
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JMSF026H05-           CCGAGTTTTTAAGACAAGTAGAGACACAGATTCCCGACAAGGATTCCAAGATCCTCGTAG
rJMSF026H05+          CCGAGTTTTTAAGACAAGTAGAGACACAGATTCCCGACAAGGATTCCAAGATCCTCGTAG
                      ____________________________________________________________
consensus             CCGAGTTTTTAAGACAAGTAGAGACACAGATTCCCGACAAGGATTCCAAGATCCTCGTAG
 
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JMSF026H05-           CTTGTGGTGAAGGATTGAGGTCTATGATGGCTGTTTCAAAGTTGCATAGAAGTGGATACG
rJMSF026H05+          CTTGTGGTGAAGGATTGAGGTCTATGATGGCTGTTTCAAAGTTGCATAGAAGTGGATACG
                      ____________________________________________________________
consensus             CTTGTGGTGAAGGATTGAGGTCTATGATGGCTGTTTCAAAGTTGCATAGAAGTGGATACG
 
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JMSF026H05-           CAAACCTGGCATGGCTGGCCGGAGGGTATAAATCCGCCGAAGATAGCCATTTTCCGGCAG
rJMSF026H05+          CAAACCTGGCATGGCTGGCCGGAGGGTATAAATCCGCCGAAGATAGCCATTTTCCGGCAG
                      ____________________________________________________________
consensus             CAAACCTGGCATGGCTGGCCGGAGGGTATAAATCCGCCGAAGATAGCCATTTTCCGGCAG
 
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JMSF026H05-           TCGAAGG                                                     
rJMSF026H05+          TCGAAGGGCCGGAGAAGTTGCAGTATGCCACCGTCGGAGGTGCATCGTATTACTTCCTTC
                      ____________________________________________________________
consensus             TCGAAGGGCCGGAGAAGTTGCAGTATGCCACCGTCGGAGGTGCATCGTATTACTTCCTTC
 
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rJMSF026H05+          AATTGCTTATTTTACTTAAAGCTGTGGGGAACAAAGATTGATCCAATAATGACTTTTTTG
                      ____________________________________________________________
consensus             AATTGCTTATTTTACTTAAAGCTGTGGGGAACAAAGATTGATCCAATAATGACTTTTTTG