Contig 012632:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032G01Sequence600012632 (5)ref|XP_009768690.1|9e-24PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMFS037C02Sequence601012632 (5)ref|XP_009768690.1|1e-23PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMFS045H08Sequence613012632 (5)ref|XP_009768691.1|3e-20PREDICTED: uncharacterized protein LOC104219681 isoform X4 [Nicotiana sylvestri
JMSF025F24Sequence617009345 (4)emb|CDP05002.1|4e-49unnamed protein product [Coffea canephora]672012632 (5)ref|XP_009768690.1|3e-26PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri
JMSF047B12Sequence682009345 (4)emb|CDP05002.1|6e-49unnamed protein product [Coffea canephora]102012632 (5)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF025F24- CACCTTTTGAGC
                      ____________________________________________________________
consensus CACCTTTTGAGC
 
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rJMSF025F24- AATTGAATACACATCCCTTCTATACCCAAAAAAATACAGTACACCCACCATAAAATAATA
                      ____________________________________________________________
consensus AATTGAATACACATCCCTTCTATACCCAAAAAAATACAGTACACCCACCATAAAATAATA
 
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rJMSF025F24- AGTAGGGTATGATCCCCAACAAAATGGGAAATAATCATACTCATCAGACAATGTTTCCAT
                      ____________________________________________________________
consensus AGTAGGGTATGATCCCCAACAAAATGGGAAATAATCATACTCATCAGACAATGTTTCCAT
 
. : . : . : . : . : . :
rJMSF047B12- TTCAATCCCATG
rJMSF025F24- TCTGTAATATAAACCCAACCATCCAATCTCATCTCGTCAACCCGTGATTTCAATCCCATG
                      ____________________________________________________________
consensus TCTGTAATATAAACCCAACCATCCAATCTCATCTCGTCAACCCGTGATTTCAATCCCATG
 
. : . : . : . : . : . :
rJMSF047B12- TACNATCTTCCAAGTGGCTACCACAAACCATGTCTATCTTCGTGAGTTGGATGANACCGC
rJMSF025F24- TACAATCTTCCAAGTGGCTACCACAAACCATGTCTATCTTCGTGAGTTGGATGAGACCGC
                      ____________________________________________________________
consensus TACAATCTTCCAAGTGGCTACCACAAACCATGTCTATCTTCGTGAGTTGGATGAGACCGC
 
. : . : . : . : . : . :
JMFS037C02+ CCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
JMFS032G01+ CCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
JMFS045H08+ CCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
rJMSF047B12- ANTGATCCTGCCCTGCTGTAAGCCATGTGC
rJMSF025F24- AGTGATCCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
                      ____________________________________________________________
consensus AGTGATCCTGCCCTGCTGTAAGCCATGTGCATTCAGACTAGTTCTCCCATGAGATGATCC
 
. : . : . : . : . : . :
JMFS037C02+ CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
JMFS032G01+ CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
JMFS045H08+ CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
rJMSF025F24- CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
                      ____________________________________________________________
consensus CTTGCTGTGAGAAGTGGACAAATCATTTTTGTCATAGTTAATTCCATTACCCACTGCATG
 
. : . : . : . : . : . :
JMFS037C02+ TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
JMFS032G01+ TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
JMFS045H08+ TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
rJMSF025F24- TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
                      ____________________________________________________________
consensus TGGTACAGAAGATGCATCCCTAGTTTCAGAGGCATTCAGCTCCATTGGACCTCTGGGTTT
 
. : . : . : . : . : . :
JMFS037C02+ TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
JMFS032G01+ TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
JMFS045H08+ TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
rJMSF025F24- TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
                      ____________________________________________________________
consensus TGCCAAAATTTTCACATTTGAAATGCCCCCTCCAGCACTGTAGGCACCATTGGAATGCTG
 
. : . : . : . : . : . :
JMFS037C02+ ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
JMFS032G01+ ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
JMFS045H08+ ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
rJMSF025F24- ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
                      ____________________________________________________________
consensus ACTTTGCATTGCCATCAACTGAGAAATGTCATCAGCAGTCTTCTTCAACCTGTGAGACTG
 
. : . : . : . : . : . :
JMFS037C02+ AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
JMFS032G01+ AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
JMFS045H08+ AGCCATGGGAGTAACAGCAACAGAATGTAAACGTGATGGA
rJMSF025F24- AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
                      ____________________________________________________________
consensus AGCCATGGGAGTAACAGCAACAGAATGTATACGTGATGGATATACTGATGGTGCTGCAGT
 
. : . : . : . : . : . :
JMFS037C02+ GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGA
JMFS032G01+ GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGA
rJMSF025F24- GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGAGCTCCTTCTCG
                      ____________________________________________________________
consensus GGCTGCAGCAACTTTAGCCACAGCCGCTGTGGCTGCTATGATCTCTTGAGCTCCTTCTCG