Contig 012620:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023L01Sequence645010707 (5)ref|XP_006365872.1|3e-83PREDICTED: myosin heavy chain, non-muscle-like [Solanum tuberosum]869012620 (3)ref|XP_009600962.1|7e-42PREDICTED: myosin-2 heavy chain isoform X2 [Nicotiana tomentosiformis] ref|XP_00
JMSF034G22Sequence676010707 (5)ref|XP_006365872.1|1e-40PREDICTED: myosin heavy chain, non-muscle-like [Solanum tuberosum]824012620 (3)ref|XP_009600962.1|5e-41PREDICTED: myosin-2 heavy chain isoform X2 [Nicotiana tomentosiformis] ref|XP_00
JMSF037C02Sequence657010707 (5)ref|XP_009779943.1|144PREDICTED: uncharacterized protein LOC104229065 [Nicotiana sylvestris]682012620 (3)ref|XP_009600962.1|5e-36PREDICTED: myosin-2 heavy chain isoform X2 [Nicotiana tomentosiformis] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023L01+ TTCNCNTTCCCAGTCCAAGATATAAGTCC
                      ____________________________________________________________
consensus TTCNCNTTCCCAGTCCAAGATATAAGTCC
 
. : . : . : . : . : . :
rJMSF023L01+ TACCCCTNGTCCAAANCCTTATCTGGACATGAGGAAAAATCTCTTACTTCTTGTTCTGCT
                      ____________________________________________________________
consensus TACCCCTNGTCCAAANCCTTATCTGGACATGAGGAAAAATCTCTTACTTCTTGTTCTGCT
 
. : . : . : . : . : . :
rJMSF034G22+ GTTTCTGGTCCTGATACTTCCCCTCCCAAGCCC-AAAAATACAAGTCCTA-CCCTGG
rJMSF023L01+ GATGTTTCTGGTCCTGATACTTCNCCTTCCAAGCCCAAAAAATACAAGTCCTACCCCTGG
                      ____________________________________________________________
consensus GATGTTTCTGGTCCTGATACTTCCCCTTCCAAGCCCAAAAAATACAAGTCCTACCCCTGG
 
. : . : . : . : . : . :
rJMSF037C02+ CGTGAGCGCTTTAAATTGCAGCAACAGTCTCTTAACCACAA
rJMSF034G22+ GCCAAAACCTTTATCTGGACGTGAGCGCTTTAAATTGCAGCAACAGTCTCTTAACCACAA
rJMSF023L01+ GCCAAAACCTTTATCTGGACGTGAGCGCTTTAAATTGCAGCAACAGTCTCTTAACCACAA
                      ____________________________________________________________
consensus GCCAAAACCTTTATCTGGACGTGAGCGCTTTAAATTGCAGCAACAGTCTCTTAACCACAA
 
. : . : . : . : . : . :
rJMSF037C02+ AAGGCAGGCACTTAAGCTGCGAAGGGAAGGCCGATCAGAAGAAGCTGATGCTGAATTTGA
rJMSF034G22+ AAGGCAGGCACTTAAGCTGCGAAGGGAAGGCCGATCAGAAGAAGCTGATGCTGAATTTGA
rJMSF023L01+ AAGGCAGGCACTTAAGCTGCGAAGGGAAGGCCGATCAGAAGAAGCTGATGCTGAATTTGA
                      ____________________________________________________________
consensus AAGGCAGGCACTTAAGCTGCGAAGGGAAGGCCGATCAGAAGAAGCTGATGCTGAATTTGA
 
. : . : . : . : . : . :
rJMSF037C02+ AAAAGCAAAGGCCATTGAAGCCCAACTGGAGGAATTGACCACAGGGTCTTCTGGTCATGG
rJMSF034G22+ AAAAGCAAAGGCCATTGAAGCCCAACTGGAGGAATTGACCACAGGGTCTTCTGGTCATGG
rJMSF023L01+ AAAAGCAAAGGCCATTGAAGCCCAACTGGAGGAATTGACCACAGGGTCTTCTGGTCATGG
                      ____________________________________________________________
consensus AAAAGCAAAGGCCATTGAAGCCCAACTGGAGGAATTGACCACAGGGTCTTCTGGTCATGG
 
. : . : . : . : . : . :
rJMSF037C02+ AGCAGAACCAACAGATGGGGTTAGTGTTGAGGATTTTCTTGATCCTCAGCTTTTGTCCGC
rJMSF034G22+ AGCAGAACCAACAGATGGGGTTAGTGTTGAGGATTTTCTTGATCCTCAGCTTTTGTCCGC
rJMSF023L01+ AGCAGAACCAACAGATGGGGTTAGTGTTGAGGATTTTCTTGATCCTCAGCTTTTGTCCGC
                      ____________________________________________________________
consensus AGCAGAACCAACAGATGGGGTTAGTGTTGAGGATTTTCTTGATCCTCAGCTTTTGTCCGC
 
. : . : . : . : . : . :
rJMSF037C02+ CTTGGCAGCCATTGGAATTTCAGATACTGCTGTTGGATCCCAAGGGCCTGAAAAATTGGA
rJMSF034G22+ CTTGGCAGCCATTGGAATTTCAGATACTGCTGTTGGATCCCAAGGGCCTGAAAAATTGGA
rJMSF023L01+ CTTGGCAGCCATTGGAATTTCAGATACTGCTGTTGGATCCCAAGGGCCTGAAAAATTGGA
                      ____________________________________________________________
consensus CTTGGCAGCCATTGGAATTTCAGATACTGCTGTTGGATCCCAAGGGCCTGAAAAATTGGA
 
. : . : . : . : . : . :
rJMSF037C02+ GGCACAAAGTTCAGTGGCTAGCAAGGTGGACACTGGTGGACCCCAAGGCCATCAAAGATC
rJMSF034G22+ GGCACAAAGTTCAGTGGCTAGCAAGGTGGACACTGGTGGACCCCAAGGCCATCAAAGATC
rJMSF023L01+ GGCACAAAGTTCAGTGGCTAGCAAGGTGGACACTGGTGGACCCCAAGGCCATCAAAGATC
                      ____________________________________________________________
consensus GGCACAAAGTTCAGTGGCTAGCAAGGTGGACACTGGTGGACCCCAAGGCCATCAAAGATC
 
. : . : . : . : . : . :
rJMSF037C02+ AGAGTCAAAAAAATCTACCACTGGTATGGTCAACAACACTGCCGAAGAGAAGATGCAGTT
rJMSF034G22+ AGAGTCAAAAAAATCTACCACTGGTATGGTCAACAACACTGCCGAAGAGAAGATGCAGTT
rJMSF023L01+ AGAGTCAAAAAAATCTACCACTGGTATGGTCAACAACACTGCCGAAGAGAAGATGCAGTT
                      ____________________________________________________________
consensus AGAGTCAAAAAAATCTACCACTGGTATGGTCAACAACACTGCCGAAGAGAAGATGCAGTT
 
. : . : . : . : . : . :
rJMSF037C02+ GGAAGAGAAGATTAAGGCCGAGAAGTTAAAGGCATTAAACTTGAAACGTTCTGGAAAGCA
rJMSF034G22+ GGAAGAGAAGATTAAGGCCGAGAAGTTAAAGGCATTAAACTTGAAACGTTCTGGAAAGCA
rJMSF023L01+ GGAAGAGAAGATTAAGGCCGAGAAGTTAAAGGCATTAAACTTGAAACGTTCTGGAAAGCA
                      ____________________________________________________________
consensus GGAAGAGAAGATTAAGGCCGAGAAGTTAAAGGCATTAAACTTGAAACGTTCTGGAAAGCA
 
. : . : . : . : . : . :
rJMSF037C02+ GGCTGAAGCCCTAGCTGCCCTTCGTCAGGCCAAACTCTTTGAAAAGGAGTTGAATTCTTT
rJMSF034G22+ GGCTGAAGCCCTAGCTGCCCTTCGTCAGGCCAAACTCTTTGAAAAGGAGTTGAATTCTTT
rJMSF023L01+ GGCTGAAGCCCTAGCTGCCCTTCGTCAGGCCAAACTCTTTGAAAAGGAGTTGAATTCTTT
                      ____________________________________________________________
consensus GGCTGAAGCCCTAGCTGCCCTTCGTCAGGCCAAACTCTTTGAAAAGGAGTTGAATTCTTT
 
. : . : . : . : . : . :
rJMSF037C02+ AAATTCTCAACAGTAATGGGTTGTAACCAAGTGTTTCCTCTAGACCTGGGATATTTCCAC
rJMSF034G22+ AAATTCTCAACAGTAATGGGTTGTAACCAAGTGTTTCCTCTAGACCTGGGATATTTCCAC
rJMSF023L01+ AAATTCTCAACAGTAATGGGTTGTAACCAAGTGTTTCCTCTAGACCTGGGATATTTCCAC
                      ____________________________________________________________
consensus AAATTCTCAACAGTAATGGGTTGTAACCAAGTGTTTCCTCTAGACCTGGGATATTTCCAC
 
. : . : . : . : . : . :
rJMSF037C02+ TGCAAGAAGGAATAAGTGTGATTATATTCCTTTTCTATTTTTTGTACAGGCTCAGCTCAA
rJMSF034G22+ TGCAAGAAGGAATAAGTGTGATTATATTCCTTTTCTATTTTTTGTACAGGCTCAGCTCAA
rJMSF023L01+ TGCAAGAAGGAATAAGTGTGATTATATTCCTTTTCTATTTTTTGTACAGGCTCAGCTCAA
                      ____________________________________________________________
consensus TGCAAGAAGGAATAAGTGTGATTATATTCCTTTTCTATTTTTTGTACAGGCTCAGCTCAA
 
. : . : . : . : . : . :
rJMSF037C02+ TGATATTACATTGGAGCGACTTCAGAAGACTGAGTTCAT
rJMSF034G22+ TGATATTACATTGGAGCGACTTCAGAAGACTGAGTTCAT
rJMSF023L01+ TGATATTACATTGGAGCGACTTCAGAAGACTGAGTTCATTGAGTTTACATCTTAAAGAAC
                      ____________________________________________________________
consensus TGATATTACATTGGAGCGACTTCAGAAGACTGAGTTCATTGAGTTTACATCTTAAAGAAC