Contig 012619:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN017E19+                                                                   ATGG
                      ____________________________________________________________
consensus                                                                     ATGG
 
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JMFN017E19+           AATGGTCACTGTCTTTATTACACTCCCCAAACAATAACAAAAATCCAGTACAGATTAATG
rJMSF023K21-                    GTCTTTATTACACTCCCCAAACAATAACAAAAATCCAGTACAGATTAATG
                      ____________________________________________________________
consensus             AATGGTCACTGTCTTTATTACACTCCCCAAACAATAACAAAAATCCAGTACAGATTAATG
 
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JMFN017E19+           GAGTTTAAGACACTAGCACACATAAATCTTGGTTTTCGAAAAAAAAAAAAACACACACAC
rJMSF023K21-          GAGTTTAAGACACTAGCACACATAAATCTTGGTTTTCG-AAAAAAAAAAAACNCNCNCNC
                      ____________________________________________________________
consensus             GAGTTTAAGACACTAGCACACATAAATCTTGGTTTTCGAAAAAAAAAAAAACACACACAC
 
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JMFN017E19+           ACAAATCTTTACAGAAATATCAGGGTTGGCAAGATCAAAGCTTGGTTTCCATAGCCAACA
rJMSF023K21-          NCAAATCTTTACNGAAATATCAGGGTNGGCAAGATCAAAGCTNGGTTTCCATAGCCAACA
                      ____________________________________________________________
consensus             ACAAATCTTTACAGAAATATCAGGGTTGGCAAGATCAAAGCTTGGTTTCCATAGCCAACA
 
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JMFN017E19+           TAAAAGCCAATTCAAGCTACTGCTCATAACATGACCCCGGACCTGTTGGAGGACTCCTGC
rJMSF023K21-          TAAAAGCCAATTCAAGCTACNGCTCANAACANGACCCCGGACCNGTNGGAGGACNCCNGC
                      ____________________________________________________________
consensus             TAAAAGCCAATTCAAGCTACTGCTCATAACATGACCCCGGACCTGTTGGAGGACTCCTGC
 
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JMFN017E19+           CATAATAGTTTGTAACGGGAGCAGCTTGAACCCCTCGTCTTGTCAAGAGGCACCGGAAAT
rJMSF023K21-          CATAANAGTTTGTAACGGGAGCAGCTTGAACCCCTCGTCTTGTCAAGAGGCNCCGGAAAT
                      ____________________________________________________________
consensus             CATAATAGTTTGTAACGGGAGCAGCTTGAACCCCTCGTCTTGTCAAGAGGCACCGGAAAT
 
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JMFN017E19+           ATTCCAGTCTCTGCAACGCAA                                       
rJMSF023K21-          ATTCCAGTCTCTGCAACGCAACTGATGATGTATTTGTTGAAAATGNGGCCNCCNGGCNGC
                      ____________________________________________________________
consensus             ATTCCAGTCTCTGCAACGCAACTGATGATGTATTTGTTGAAAATGNGGCCNCCNGGCNGC
 
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rJMSF023K21-          TCCACAGGCGCTCTGCTGCAGCTGCAGCTCGGGGCCATATGGTTTGTTGAACATTTGAAG
                      ____________________________________________________________
consensus             TCCACAGGCGCTCTGCTGCAGCTGCAGCTCGGGGCCATATGGTTTGTTGAACATTTGAAG