| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003N02 | Sequence | 397 | 003663 (6) | ref|XP_009780105.1| | 3e-16 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana | 715 | 012604 (6) | ref|XP_009780105.1| | 2e-84 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana |
| JMSF005M24 | Sequence | 353 | 003663 (6) | ref|XP_009780105.1| | 4e-26 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana | 279 | 012604 (6) | ref|XP_011089861.1| | 4e-05 | PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3 [Sesam |
| JMSF021I13 | Sequence | 653 | 003663 (6) | ref|XP_009780105.1| | 2e-30 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana | 758 | 012604 (6) | gb|KJB35596.1| | 6e-62 | hypothetical protein B456_006G121200 [Gossypium raimondii] gb|KJB35597.1| hypoth |
| JMSF027H08 | Sequence | 687 | 003663 (6) | ref|XP_004251270.1| | 2e-37 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Solanum ly | 724 | 012604 (6) | gb|KJB35596.1| | 9e-61 | hypothetical protein B456_006G121200 [Gossypium raimondii] gb|KJB35597.1| hypoth |
| JMSF027P17 | Sequence | 646 | 003663 (6) | ref|XP_004251270.1| | 1e-37 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Solanum ly | 765 | 012604 (6) | ref|XP_009780111.1| | 2e-69 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Nicotiana |
| JMSF032J18 | Sequence | 670 | 003663 (6) | ref|XP_009780105.1| | 6e-32 | PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Nicotiana | 718 | 012604 (6) | gb|KJB35596.1| | 1e-57 | hypothetical protein B456_006G121200 [Gossypium raimondii] gb|KJB35597.1| hypoth |
This contig is upended
. : . : . : . : . : . :
rJMSF003N02+ TCTGATGGATAAAGAAACCGAATTGCAAGGAATC
____________________________________________________________
consensus TCTGATGGATAAAGAAACCGAATTGCAAGGAATC
. : . : . : . : . : . :
rJMSF003N02+ TGCGAGGAGAACGAAAACCTAGCTTCGAGATTGGAGAACGGACAATCAGGACGGAGAGAA
rJMSF027P17+ GAGAACGGACAATCAGGACGGAGAGAA
____________________________________________________________
consensus TGCGAGGAGAACGAAAACCTAGCTTCGAGATTGGAGAACGGACAATCAGGACGGAGAGAA
. : . : . : . : . : . :
rJMSF003N02+ TACGAACTTGAAAAGGAGCTTCAGAAATCAAAACACGAGATCGAAAACCTGAAGGCGAAC
rJMSF027P17+ TACGAACTTGAAAAGGAGCTTCAGAAATCAAAACACGAGATCGAAAACCTGAAGGCGAAC
rJMSF027H08+ GAAGGCGAAC
rJMSF021I13+ CAGAAATCAAAACNCGAGATCGGAAACCTGAAGGCGAAC
____________________________________________________________
consensus TACGAACTTGAAAAGGAGCTTCAGAAATCAAAACACGAGATCGAAAACCTGAAGGCGAAC
. : . : . : . : . : . :
rJMSF003N02+ TTAATGGACAAGGAAACAGAGCTGCAGAACATATCAGAGGAAAACGCGATGCTGAAGCTG
rJMSF027P17+ TTAATGGACAAGGAAACAGAGCTGCAGAACATATCAGAGGAAAACGCGATGCTGAAGCTG
rJMSF027H08+ TTAATGGACAAGGAAACAGAGCTGCAGAACATATCAGAGGAAAACGCGATGCTGAAGCTG
rJMSF032J18+ TTAATGGNCAAGGAAACAGAGCTGCAGAACATATCAGAGGAAAACGCGATGCTGAAGCTG
rJMSF021I13+ TTAATGGACAAGGAAACAGAGCTGCAGAACATATCAGAGGAAAACGCGATGCTGAAGCTG
____________________________________________________________
consensus TTAATGGACAAGGAAACAGAGCTGCAGAACATATCAGAGGAAAACGCGATGCTGAAGCTG
. : . : . : . : . : . :
rJMSF003N02+ GACGTCAAGACGAGAGAATCCAACATCGGGGAAACGAATGGCGATACTGCTACTGAACTC
rJMSF027P17+ GACGTCAAGACGAGAGAATCCAACATCGGGGAAACGAATGGCGATACTGCTACTGAACTC
rJMSF027H08+ GACGTCAAGACGAGAGAATCCAACATCGGGGAAACGAATGGCGATACTGCTACTGAACTC
rJMSF032J18+ GACGTCAAGACGAGAGAATCCAACATCGGGGAAACGAATGGCGATACTGCTACTGAACTC
rJMSF021I13+ GACGTCAAGACGAGAGAATCCAACATCGGGGAAACGAATGGCGATACTGCTACTGAACTC
____________________________________________________________
consensus GACGTCAAGACGAGAGAATCCAACATCGGGGAAACGAATGGCGATACTGCTACTGAACTC
. : . : . : . : . : . :
rJMSF003N02+ GAGGGAGCCAACATGGTAGATCAAGAAGCTCTCGTAAAGCTCAAGTACTTGAAAGAAGAA
rJMSF027P17+ GAGGGAGCCAACATGGTAGATCAAGAAGCTCTCGTAAAGCTCAAGTACTTGAAAGAAGAA
rJMSF027H08+ GAGGGAGCCAACATGGTAGATCAAGAAGCTCTCGTAAAGCTCAAGTACTTGAAAGAAGAA
rJMSF032J18+ GAGGGAGCCAACATGGTAGATCAAGAAGCTCTCGTAAAGCTCAAGTACTTGAAAGAAGAA
rJMSF021I13+ GAGGGAGCCAACATGGTAGATCAAGAAGCTCTCGTAAAGCTCAAGTACTTGAAAGAAGAA
____________________________________________________________
consensus GAGGGAGCCAACATGGTAGATCAAGAAGCTCTCGTAAAGCTCAAGTACTTGAAAGAAGAA
. : . : . : . : . : . :
rJMSF003N02+ GCCGATAAGAGCAATCAACGAACGGCTCGAGTGATGGAGCAGCTGGATGCAGCGCAGGCC
rJMSF027P17+ GCCGATAAGAGCAATCAACGAACGGCTCGAGTGATGGAGCAGCTGGATGCAGCGCAGGCC
rJMSF027H08+ GCCGATAAGAGCAATCAACGAACGGCTCGAGTGATGGAGCAGCTGGATGCAGCGCAGGCC
rJMSF032J18+ GCCGATAAGAGCAATCAACGAACGGCTCGAGTGATGGAGCAGCTGGATGCAGCGCAGGCC
rJMSF021I13+ GCCGATAAGAGCAATCAACGAACGGCTCGAGTGATGGAGCAGCTGGATGCAGCGCAGGCC
____________________________________________________________
consensus GCCGATAAGAGCAATCAACGAACGGCTCGAGTGATGGAGCAGCTGGATGCAGCGCAGGCC
. : . : . : . : . : . :
rJMSF003N02+ TCCAACGCAGAAATGGAAGCCGAGCTAAGGAGGCTAAAGGTGCAGTGTGACCAATGGCGC
rJMSF027P17+ TCCAACGCAGAAATGGAAGCCGAGCTAAGGAGGCTAAAGGTGCAGTGTGACCAATGGCGC
rJMSF027H08+ TCCAACGCAGAAATGGAAGCCGAGCTAAGGAGGCTAAAGGTGCAGTGTGACCAATGGCGC
rJMSF032J18+ TCCAACGCAGAAATGGAAGCCGAGCTAAGGAGGCTAAAGGTGCAGTGTGACCAATGGCGC
rJMSF021I13+ TCCAACGCAGAAATGGAAGCCGAGCTAAGGAGGCTAAAGGTGCAGTGTGACCAATGGCGC
____________________________________________________________
consensus TCCAACGCAGAAATGGAAGCCGAGCTAAGGAGGCTAAAGGTGCAGTGTGACCAATGGCGC
. : . : . : . : . : . :
rJMSF003N02+ AAGGCTGCAGAAGCAGCTGCTGCGATGCTTTCAGCTGGGGACAACGGGAAATTCATCGAG
rJMSF027P17+ AAGGCTGCAGAAGCAGCTGCTGCGATGCTTTCAGCTGGGGACAACGGGAAATTCATCGAG
rJMSF027H08+ AAGGCTGCAGAAGCAGCTGCTGCGATGCTTTCAGCTGGGGACAACGGGAAATTCATCGAG
rJMSF005M24+ ATCGAG
rJMSF032J18+ AAGGCTGCAGAAGCAGCTGCTGCGATGCTTTCAGCTGGGGACAACGGGAAATTCATCGAG
rJMSF021I13+ AAGGCTGCAGAAGCAGCTGCTGCGATGCTTTCAGCTGGGGACAACGGGAAATTCATCGAG
____________________________________________________________
consensus AAGGCTGCAGAAGCAGCTGCTGCGATGCTTTCAGCTGGGGACAACGGGAAATTCATCGAG
. : . : . : . : . : . :
rJMSF003N02+ AAAACATTGCACAACCACAGCCCCGGTTCAGGGAAGATCAGTCCTCCTTACAACGAAGAC
rJMSF027P17+ AAAACATTGCACAACCACAGCCCCGGTTCAGGGAAGATCAGTCCTCCTTACAACGAAGAC
rJMSF027H08+ AAAACATTGCACAACCACAGCCCCGGTTCAGGGAAGATCAGTCCTCCTTACAACGAAGAC
rJMSF005M24+ AAAACATTGCACANCCACAGCCCCGGTTCAGGGAAGATCAGTCCTCNTTNCAACGAAGAC
rJMSF032J18+ AAAACATTGCACAACCACAGCCCCGGTTCAGGGAAGATCAGTCCTCCTTACAACGAAGAC
rJMSF021I13+ AAAACATTGCACAACCACAGCCCCGGTTCAGGGAAGATCAGTCCTCCTTACAACGAAGAC
____________________________________________________________
consensus AAAACATTGCACAACCACAGCCCCGGTTCAGGGAAGATCAGTCCTCCTTACAACGAAGAC
. : . : . : . : . : . :
rJMSF003N02+ GTGGACGAAGATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
rJMSF027P17+ GTGGACGAAGATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
rJMSF027H08+ GTGGACGAAGATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
rJMSF005M24+ GTGGNCGAATATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
rJMSF032J18+ GTGGACGAAGATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
rJMSF021I13+ GTGGACGAAGATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
____________________________________________________________
consensus GTGGACGAAGATTTGCTGAAGAGGAAAAACGCAAATATGCTTAAGAGACTCGGCATCTCT
. : . : . : . : . : . :
rJMSF003N02+ TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCTTAAGAGACTCACATATTTGACATA-TT
rJMSF027P17+ TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCTTAAGAGACTCACATATTTGACATA-TT
rJMSF027H08+ TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCTTAAGAGACTCACATATTTGACATA-TT
rJMSF005M24+ TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCNTAAGAGACTCACATATTTGACATACTT
rJMSF032J18+ TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCTTAAGAGACTCACATATTTGACATA-TT
rJMSF021I13+ TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCTTAAGAGACTCACATATTTGACATA-TT
____________________________________________________________
consensus TGGAAGAAGCAACAGAAATAGGAGCTCCTTGCTTAAGAGACTCACATATTTGACATA-TT
. : . : . : . : . : . :
rJMSF003N02+ TAATGTAAGTGGTGTTCTATCT
rJMSF027P17+ TAATGTAAGTGGTGTTCTATCTTGTTCCAATGTGTACTTTTCAAACCAATCCATATGGAT
rJMSF027H08+ TAATGTAAGTGGTGTTCTATCTTGTTCCAATGTGTACTTTTCAAACCAATCCATATGGAT
rJMSF005M24+ TAATGTAAGTGGTGTTCTATCTTGTTCCAATGNGTACTTTTCAAACCAATCCATATGGAT
rJMSF032J18+ TAATGTAAGTGGTGTTCTATCTTGTTCCAATGTGTACTTTTCAAACCAATCCATATGGAT
rJMSF021I13+ TAATGTAAGTGGTGTTCTATCTTGTTCCAATGTGTACTTTTCAAACCAATCCATATGGAT
____________________________________________________________
consensus TAATGTAAGTGGTGTTCTATCTTGTTCCAATGTGTACTTTTCAAACCAATCCATATGGAT
. : . : . : . : . : . :
rJMSF027P17+ ACTTATTGTGACCAGGTATTATGTTGATGTCTAGGTGATTTTAC
rJMSF027H08+ ACTTATTGTGACCAGGTATTATGTTGATGTCTAGGTGATTTTACATTTGTTGTGGGGTTC
rJMSF005M24+ ACTTANTGTGACCAGGTATTATGTTGATGTCTA
rJMSF032J18+ ACTTATTGTGACCAGGTATTATGTTGATGTCTAGGTGATTTTACATTTGTTGTGGGGTTC
rJMSF021I13+ ACTTATTGTGACCAGGTATTATGTTGATGTCTAGGTGATTTTACATTTGTTGTGGGGTTC
____________________________________________________________
consensus ACTTATTGTGACCAGGTATTATGTTGATGTCTAGGTGATTTTACATTTGTTGTGGGGTTC
. : . : . : . : . : . :
rJMSF027H08+ TTATTCTGTATTCATGCAAAATATCAGTTGAAACTTGAAACACTAGACTACTTGG
rJMSF032J18+ TTATTCTGTATTCATGCAAAATATCAGTTGAAACTTGAAACACTAGACTACTTGG
rJMSF021I13+ TTATTCTGTATTCATGCAAAATATCAGTTGAAACTTGAAACACTAGACTACTTGGGTAGC
____________________________________________________________
consensus TTATTCTGTATTCATGCAAAATATCAGTTGAAACTTGAAACACTAGACTACTTGGGTAGC