Contig 012591:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019I17Sequence497000598 (9)ref|XP_009600348.1|6e-36PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650776012591 (2)emb|CBI30743.3|1e-121unnamed protein product [Vitis vinifera]
JMSF045G23Sequence746012591 (2)ref|XP_011102303.1|1e-96PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650751005812 (8)ref|XP_007025266.1|5e-76Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao] gb

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045G23- AAATTGTGGGGGAGGCGATGTTGTAATTGATGGCACTACATATGAC
                      ____________________________________________________________
consensus AAATTGTGGGGGAGGCGATGTTGTAATTGATGGCACTACATATGAC
 
. : . : . : . : . : . :
JMSF045G23- GCAGATAAAGATTCTACAGGCTATGCGCAATTTGTTTCTAACAAAGAGAACTGGGTAACT
                      ____________________________________________________________
consensus GCAGATAAAGATTCTACAGGCTATGCGCAATTTGTTTCTAACAAAGAGAACTGGGTAACT
 
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JMSF045G23- AGTAATACGGGGTACTTTTGGGACAGAACCTTAAATTTATCTGACTATACAGCAACAAAT
                      ____________________________________________________________
consensus AGTAATACGGGGTACTTTTGGGACAGAACCTTAAATTTATCTGACTATACAGCAACAAAT
 
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JMSF045G23- GTATCAGTCATCAAAGAAAAAGACTCCGAAATCTACCAGACGGCTCGTTTGTCTCCTTTA
                      ____________________________________________________________
consensus GTATCAGTCATCAAAGAAAAAGACTCCGAAATCTACCAGACGGCTCGTTTGTCTCCTTTA
 
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JMSF045G23- TCTCTGACATATCACGGACGCTGTTTAGCGAATGGAAACTACAATGTGAAACTTCATTTT
rJMSF019I17+ TGTTTAGCAAATGGAAACTATACTGTGAAACTCTATTTT
                      ____________________________________________________________
consensus TCTCTGACATATCACGGACGCTGTTTAGCGAATGGAAACTATACTGTGAAACTTTATTTT
 
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JMSF045G23- GCAGAGATAGTTTTGAGAGATAATAGCTCTTTTCAAAGTCTTGGTAGACGCATATTTGAT
rJMSF019I17+ GCAGAGATAGTTCTGAGAGATAATAGATCTTTTCAAAGTCTTGGAAGACGCATGTTCGAT
                      ____________________________________________________________
consensus GCAGAGATAGTTTTGAGAGATAATAGCTCTTTTCAAAGTCTTGGTAGACGCATGTTTGAT
 
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JMSF045G23- GTTTATATACAGGGTGAAAGGAAATTAAAGGATTTTGATATTGAAACTGAAGCACAAGGA
rJMSF019I17+ GTTTATATTCAGGGCGAAAGGAAATTAAAGGATTTTGATATTGAAACTGCAGCACAAGGA
                      ____________________________________________________________
consensus GTTTATATTCAGGGTGAAAGGAAATTAAAGGATTTTGATATTGAAACTGCAGCACAAGGA
 
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JMSF045G23- GCCGATAAGGCTTTAGTTAAACAATTCGAAGCAGTTGTCAGAGATAAAACTCTCGAGGTG
rJMSF019I17+ GTTGATAAAGCCTTAGTTAAACAATTTCATGCAGTTGTCAGAGATAAAACTCTCGAGTTG
                      ____________________________________________________________
consensus GTTGATAAGGCTTTAGTTAAACAATTTGATGCAGTTGTCAGAGATAAAACTCTCGAGTTG
 
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JMSF045G23- CGCTTTGAATATGCTGGAAAAGGAACAACAGCAGCTCCAATTAAAGGATCATATGGACCT
rJMSF019I17+ CGCTTTGAGTATGCTGAAAAGGGAACAACAGTAGTCCCACTTCCAGGAGTATATGGCCCT
                      ____________________________________________________________
consensus CGCTTTGAGTATGCTGGAAAGGGAACAACAGTAGTTCCACTTCCAGGATTATATGGCCCT
 
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JMSF045G23- TTAGTATCTGCCATTTCTGTGGAATCTGATTTCAAATCTGCCAAAGAGAGAAAGAGATTG
rJMSF019I17+ TTAATATCTGCCATTTCTGTGGAATCTGATTTCAAGCCTCCCAAAAATATGAAGGCTTTA
                      ____________________________________________________________
consensus TTAGTATCTGCCATTTCTGTGGAATCTGATTTCAAGTCTGCCAAAGATATGAAGGGTTTG
 
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JMSF045G23- ATCATACTTGTCGCAGTAGCTGCTTCTTTGTTTCTTATTTTTGCAATTCTCTGCTTTGCT
rJMSF019I17+ ATCATAGCTGTTGCAACGGCTTCTTCTTTGTTTCTTGTTTTCACAATTCTCTGTTTTGCT
                      ____________________________________________________________
consensus ATCATAGTTGTTGCAGTGGCTTCTTCTTTGTTTCTTGTTTTTGCAATTCTCTGTTTTGCT
 
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JMSF045G23- GGGTGGAAGATTTACATTAGAAACAAGGTCTCACAGGAAAAGGAGCTACNAGGCCTTGAT
rJMSF019I17+ GGGTGGAAGATCTACACTAGAAACAAGACCTCAAAAGAAAGGGAACTACGAGGCCTTGAT
                      ____________________________________________________________
consensus GGGTGGAAGATTTACATTAGAAACAAGGTCTCACAGGAAAGGGAGCTACGAGGCCTTGAT
 
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JMSF045G23- CTACGAACTCGTCTATTTACCATGAGACAAATTAAAG
rJMSF019I17+ CTACGAACTGGACTATTTACCTTAAGACAAATTAAAGCCGCTACAAACAACTTTGATGCT
                      ____________________________________________________________
consensus CTACGAACTGGTCTATTTACCTTGAGACAAATTAAAGCCGCTACAAACAACTTTGATGCT
 
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rJMSF019I17+ TCAAATAAGATTGGTGAAGGTGGATTTGGACCAGTCTACAAGGGCATATTATTGGATGGT
                      ____________________________________________________________
consensus TCAAATAAGATTGGTGAAGGTGGATTTGGACCAGTCTACAAGGGCATATTATTGGATGGT
 
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rJMSF019I17+ ACCGTTATTGCTGTGAAACAACTCTCGTCAAAATCAAGACAGGGAAACCATGAATTTTTG
                      ____________________________________________________________
consensus ACCGTTATTGCTGTGAAACAACTCTCGTCAAAATCAAGACAGGGAAACCATGAATTTTTG
 
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rJMSF019I17+ AATGAAATAAGCATGATTTCTTGTTTTCACCACCCTAATCTTGTGAAACTTTATGGGTGT
                      ____________________________________________________________
consensus AATGAAATAAGCATGATTTCTTGTTTTCACCACCCTAATCTTGTGAAACTTTATGGGTGT
 
. : . : . : . : . : . :
rJMSF019I17+ TGTGTTGAGGGAACGCAATTGCTGCTAGTGTATGAGTACTGGAAAACAACAGCCTTCCCA
                      ____________________________________________________________
consensus TGTGTTGAGGGAACGCAATTGCTGCTAGTGTATGAGTACTGGAAAACAACAGCCTTCCCA