Contig 012585:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018L03Sequence543000709 (2)ref|XP_009631962.1|1e-54PREDICTED: uncharacterized protein LOC104121622 isoform X2 [Nicotiana tomentosi786012585 (2)ref|XP_006355633.1|326PREDICTED: uncharacterized protein LOC102604214 [Solanum tuberosum]
JMSF026A18Sequence633000709 (2)ref|XP_009788395.1|5e-73PREDICTED: uncharacterized protein LOC104236214 isoform X1 [Nicotiana sylvestri703012585 (2)ref|XP_006355633.1|291PREDICTED: uncharacterized protein LOC102604214 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018L03+ TAAAAG
                      ____________________________________________________________
consensus TAAAAG
 
. : . : . : . : . : . :
rJMSF018L03+ CATGCTAGATGATGNCAATAGATTGCTCAAGGCAGAAGATCGGTCATCTGTACCTTTGGT
                      ____________________________________________________________
consensus CATGCTAGATGATGNCAATAGATTGCTCAAGGCAGAAGATCGGTCATCTGTACCTTTGGT
 
. : . : . : . : . : . :
rJMSF026A18+ TGCTCATTCTGTTGATTCTCTAAAAGAGCTGTTTATGAATCATGACTT
rJMSF018L03+ ANTGATCTGCCCTGCTCATTCTGGTGATTCTCTAAAAGAGCTGTTTATGAATCATGACTT
                      ____________________________________________________________
consensus ANTGATCTGCCCTGCTCATTCTGTTGATTCTCTAAAAGAGCTGTTTATGAATCATGACTT
 
. : . : . : . : . : . :
rJMSF026A18+ CTTCTCTTTCGACTCGGAGAAGGTCTGGTTCTTGGAAGAAGATATGCTTCCGGTTGTTAG
rJMSF018L03+ CTTCTCTTTCGACTCGGAGAAGGTCTGGTTCTTGGAAGAAGATATGCTTCCGGTTGTTAG
                      ____________________________________________________________
consensus CTTCTCTTTCGACTCGGAGAAGGTCTGGTTCTTGGAAGAAGATATGCTTCCGGTTGTTAG
 
. : . : . : . : . : . :
rJMSF026A18+ TAGTTCACAGGAAGAAGAAAACAAACACAAGATCTTGATGAAATCACCGTGGGAGATTCT
rJMSF018L03+ TAGTTCACAGGAAGAAGAAAACAAACACAAGATCTTGATGAAATCACCGTGGGAGATTCT
                      ____________________________________________________________
consensus TAGTTCACAGGAAGAAGAAAACAAACACAAGATCTTGATGAAATCACCGTGGGAGATTCT
 
. : . : . : . : . : . :
rJMSF026A18+ CCAAAGACCAGTTGGATCTGGAGGCATTGTTGGCATGCTTTCATCCCACAACCTATTAGA
rJMSF018L03+ CCAAAGACCAGTTGGATCTGGAGGCATTGTTGGCATGCTTTCATCCCACAACCTATTAGA
                      ____________________________________________________________
consensus CCAAAGACCAGTTGGATCTGGAGGCATTGTTGGCATGCTTTCATCCCACAACCTATTAGA
 
. : . : . : . : . : . :
rJMSF026A18+ AAATCTACATGAGATGAATGTGGAGTATATTCAGATTTGTTCTGTCAATCAAGGGTACAC
rJMSF018L03+ AAATCTACATGAGATGAATGTGGAGTATATTCAGATTTGTTCTGTCAATCAAGGGTACAC
                      ____________________________________________________________
consensus AAATCTACATGAGATGAATGTGGAGTATATTCAGATTTGTTCTGTCAATCAAGGGTACAC
 
. : . : . : . : . : . :
rJMSF026A18+ AAACCAGCAAATGCTGCTTGGTTTAACTGATTCATGCAAAGCAAACGTTGGGATACAATT
rJMSF018L03+ AAACCAGCAAATGCTGCTTGGTTTAACTGATTCATGCAAAGCAAACGTTGGGATACAATT
                      ____________________________________________________________
consensus AAACCAGCAAATGCTGCTTGGTTTAACTGATTCATGCAAAGCAAACGTTGGGATACAATT
 
. : . : . : . : . : . :
rJMSF026A18+ CAAGGACGTGAACAACGTCGAGGATGATTTGAACTTGGTGTTTTCCATCAACTTCATGAA
rJMSF018L03+ CAAGGACGTGAACAACGTCGAGGATGATTTGAACTTGGTGTTTTCCATCAACTTCATGAA
                      ____________________________________________________________
consensus CAAGGACGTGAACAACGTCGAGGATGATTTGAACTTGGTGTTTTCCATCAACTTCATGAA
 
. : . : . : . : . : . :
rJMSF026A18+ GAGGTTGGCAAATCAGACAGACAGACTTCACTTCCATGCCGTCGTGAAGCCAAATCAACA
rJMSF018L03+ GAAGTTGGCAAATCAGACAGACAGACTTCACTTCCATGCCGTCGTGAAGCCAAATCAACA
                      ____________________________________________________________
consensus GAGGTTGGCAAATCAGACAGACAGACTTCACTTCCATGCCGTCGTGAAGCCAAATCAACA
 
. : . : . : . : . : . :
rJMSF026A18+ TTCCGAGTTGGTGAACAAAGAGTGGGTTGACGTTATCCCCTCGTCGCCTAACTCGTATGA
rJMSF018L03+ TTCCGAGTTGGTGAACAAAGAGTGGGTTGACGTTATCCCCTCGTCGCCTAACTCGTATGA
                      ____________________________________________________________
consensus TTCCGAGTTGGTGAACAAAGAGTGGGTTGACGTTATCCCCTCGTCGCCTAACTCGTATGA
 
. : . : . : . : . : . :
rJMSF026A18+ GTTTCATTGTTCACTTCACAGTTGCTTGAATGCTTGTAGTCCTGGTAAGGTTTGTCTGTT
rJMSF018L03+ GTTTCATTGTTCACTTCACAGTTGCTTGAATGCTTGTAGTCCTGGTAAGGTTTGTCTGTT
                      ____________________________________________________________
consensus GTTTCATTGTTCACTTCACAGTTGCTTGAATGCTTGTAGTCCTGGTAAGGTTTGTCTGTT
 
. : . : . : . : . : . :
rJMSF026A18+ AGAGGTTGCAGAGTAGTATATGTGATGTAAGTGCATGACTTGGTCTTCTTGTAAGTTGTA
rJMSF018L03+ AGAGGTTGCAGAGTAGTATATGTGATGTAAGTGCATGACTTGGTCTTCTTGTAAGTTGTA
                      ____________________________________________________________
consensus AGAGGTTGCAGAGTAGTATATGTGATGTAAGTGCATGACTTGGTCTTCTTGTAAGTTGTA
 
. : . : . : . : . : . :
rJMSF026A18+ ACATATCTTCAATACTAGTTTCTATACGCATTACGTGTGTAGAATAGTGCCCAAC
rJMSF018L03+ ACATATCTTCAATACTAGTTTCTATACGCATTACGTGTGTAGAATAGTGCCCAACGTTAT
                      ____________________________________________________________
consensus ACATATCTTCAATACTAGTTTCTATACGCATTACGTGTGTAGAATAGTGCCCAACGTTAT