Contig 012582:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020L01Sequence552012582 (2)emb|CDP08511.1|8e-19unnamed protein product [Coffea canephora]662021260emb|CDP09561.1|1e-109unnamed protein product [Coffea canephora]
JMSF018A10Sequence258016755755012582 (2)ref|XP_004242342.1|4e-106PREDICTED: EKC/KEOPS complex subunit bud32 isoform X1 [Solanum lycopersicum] re

Alignment

This contig is upended


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JMFF020L01-                                       AGCCACGCCGCACCCTCTTTCTCTTTCTCTCC
                      ____________________________________________________________
consensus                                         AGCCACGCCGCACCCTCTTTCTCTTTCTCTCC
 
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JMFF020L01-           GCCATACCCTCCTCCCTTCTCCATGAAGGCGGCGCGTTGAACAGAGGCATTGCACGGTTG
                      ____________________________________________________________
consensus             GCCATACCCTCCTCCCTTCTCCATGAAGGCGGCGCGTTGAACAGAGGCATTGCACGGTTG
 
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JMFF020L01-           ACGGTGTCGGCGTATTTTCTCTTCTCCATCTCTCTCGAAACTTGACATTTGGCGGCGACA
                      ____________________________________________________________
consensus             ACGGTGTCGGCGTATTTTCTCTTCTCCATCTCTCTCGAAACTTGACATTTGGCGGCGACA
 
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JMFF020L01-           TCTCTTTCAGGAAGAGGACTTAAAAGCAGGCTGTCCATTAGGGTGCCGTTTGATCCTATC
                      ____________________________________________________________
consensus             TCTCTTTCAGGAAGAGGACTTAAAAGCAGGCTGTCCATTAGGGTGCCGTTTGATCCTATC
 
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JMFF020L01-           GTATAAAATATCAAGAAAAACGACCAAGAGTCTTTGAGTCCACATATGTAGGCAGGAGAT
                      ____________________________________________________________
consensus             GTATAAAATATCAAGAAAAACGACCAAGAGTCTTTGAGTCCACATATGTAGGCAGGAGAT
 
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JMFF020L01-           CAATTGTTAAGGAACGGTTTCCAAAGAAGTAGTACAGACATCCGTCTTTGGACTCGAAGC
                      ____________________________________________________________
consensus             CAATTGTTAAGGAACGGTTTCCAAAGAAGTAGTACAGACATCCGTCTTTGGACTCGAAGC
 
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JMFF020L01-           TTACTCTTAAGAGCTTGAATGCGGAGGCTAGATGCCTAGATGTATGACGAAAGCTAGACG
rJMSF018A10+                                             CTAGATGTATGACGAAAGCTAGACG
                      ____________________________________________________________
consensus             TTACTCTTAAGAGCTTGAATGCGGAGGCTAGATGCCTAGATGTATGACGAAAGCTAGACG
 
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JMFF020L01-           ACTAGGTGTTGCTA-CCCAGTGCTTTATGCTGTTGATCCCATATTGCATTCTGTGACTT 
rJMSF018A10+          ATTAGGTGTTGCTACCCCAGTGCTTTATGCTGTTGATCCCATATTGCATTCTCTGACTTT
                      ____________________________________________________________
consensus             ATTAGGTGTTGCTACCCCAGTGCTTTATGCTGTTGATCCCATATTGCATTCTGTGACTTT
 
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rJMSF018A10+          TGAGTATGTAGAAGGACCCCTTGTGAAAGATATTCTCCTTGGTTTTGGTTCTTCGGGCAT
                      ____________________________________________________________
consensus             TGAGTATGTAGAAGGACCCCTTGTGAAAGATATTCTCCTTGGTTTTGGTTCTTCGGGCAT
 
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rJMSF018A10+          AGATGAAGAAAGGATTGCTGACATTGCATTTCAGATTGGTAATGCAATTGGCAAAATACA
                      ____________________________________________________________
consensus             AGATGAAGAAAGGATTGCTGACATTGCATTTCAGATTGGTAATGCAATTGGCAAAATACA
 
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rJMSF018A10+          TGATGGTGGCCTCGTCCATGGTGATTTGACAACCTCAAACATGATAATGCGAAGTGCTAC
                      ____________________________________________________________
consensus             TGATGGTGGCCTCGTCCATGGTGATTTGACAACCTCAAACATGATAATGCGAAGTGCTAC
 
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rJMSF018A10+          CAATCAACTGGTACTCATTGACTTTGGCCTAAGCTTTACTTCAACACTTCCAGAAGATAA
                      ____________________________________________________________
consensus             CAATCAACTGGTACTCATTGACTTTGGCCTAAGCTTTACTTCAACACTTCCAGAAGATAA
 
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rJMSF018A10+          AGCAGTTGATTTGTATGTACTAGAACGTGCACTACTATCTATGCACTCTTCATGTGGAAA
                      ____________________________________________________________
consensus             AGCAGTTGATTTGTATGTACTAGAACGTGCACTACTATCTATGCACTCTTCATGTGGAAA
 
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rJMSF018A10+          TGTGATGGACCGAATACTTGCTGCATACAAGAAGTCCTCGAAACAGTGGTCATCAACCTT
                      ____________________________________________________________
consensus             TGTGATGGACCGAATACTTGCTGCATACAAGAAGTCCTCGAAACAGTGGTCATCAACCTT
 
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rJMSF018A10+          GAACAAGCTAGCCCAAGTACGCCAAAGAGGTAGAAAACGCACCATGGTTGGCTGAGCTTC
                      ____________________________________________________________
consensus             GAACAAGCTAGCCCAAGTACGCCAAAGAGGTAGAAAACGCACCATGGTTGGCTGAGCTTC
 
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rJMSF018A10+          CACTGTATTCTGCTTTGCATCCCAGTTAGGTTTCAGCTTGTTTGGTATGCTTTGTCATAC
                      ____________________________________________________________
consensus             CACTGTATTCTGCTTTGCATCCCAGTTAGGTTTCAGCTTGTTTGGTATGCTTTGTCATAC
 
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rJMSF018A10+          ACTTGTAATACTCCTTGTCTTAATGCATAATACTTTTAGCAGAGATTGTGTACCCAATAT
                      ____________________________________________________________
consensus             ACTTGTAATACTCCTTGTCTTAATGCATAATACTTTTAGCAGAGATTGTGTACCCAATAT
 
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rJMSF018A10+          ATATGTGTTTATATTTCTCTATTAGTATTCCTAGAGGGTGTCACGATAGGACTATGCCTA
                      ____________________________________________________________
consensus             ATATGTGTTTATATTTCTCTATTAGTATTCCTAGAGGGTGTCACGATAGGACTATGCCTA
 
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rJMSF018A10+          GCTTCATGAATCATGACATTGACATTATGCATAGAATTGTTTAATTATAGGTCACTGCCT
                      ____________________________________________________________
consensus             GCTTCATGAATCATGACATTGACATTATGCATAGAATTGTTTAATTATAGGTCACTGCCT