Contig 012581:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017P11Sequence459005106 (4)747012581 (4)emb|CDO97619.1|1e-61unnamed protein product [Coffea canephora]
JMSF025H03Sequence608005106 (4)ref|XP_009598695.1|6e-08PREDICTED: MACPF domain-containing protein At4g24290 [Nicotiana tomentosiformis775012581 (4)emb|CDO97619.1|4e-70unnamed protein product [Coffea canephora]
JMSF028N22Sequence660005106 (4)ref|XP_009782294.1|2e-20PREDICTED: MACPF domain-containing protein At4g24290 [Nicotiana sylvestris] ref654012581 (4)emb|CDO97619.1|4e-65unnamed protein product [Coffea canephora]
JMSF030I24Sequence647005106 (4)ref|XP_009782294.1|2e-17PREDICTED: MACPF domain-containing protein At4g24290 [Nicotiana sylvestris] ref664012581 (4)emb|CDO97619.1|1e-40unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF025H03+                                                     CCATAGTCACTGGAGCG
                      ____________________________________________________________
consensus                                                        CCATAGTCACTGGAGCG
 
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rJMSF025H03+          AAACTGGAAGTTGGTGACTATGGGTTGAAAAAGGTTCTTTTCCTAAGGCTCAAATTCTNT
                      ____________________________________________________________
consensus             AAACTGGAAGTTGGTGACTATGGGTTGAAAAAGGTTCTTTTCCTAAGGCTCAAATTCTNT
 
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rJMSF028N22+                   GGTGCTACAATGGTAAGACAATCGGAGTGGGATGGCTCACCTGGTTTGGCC
rJMSF025H03+          ACTGTTCTGGGTGCTACAATGGTAAGACAATCGGAGTGGGATGGCTCACCTGGTTTGGCC
rJMSF017P11+                                          GGAGTGGGATGGCTCACCTGGTTTGGCC
                      ____________________________________________________________
consensus             ACTGTTCTGGGTGCTACAATGGTAAGACAATCGGAGTGGGATGGCTCACCTGGTTTGGCC
 
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rJMSF028N22+          CGCAAATCTGGATTAATATCAACTCTGATTAGTCATCATTTTACATCAGTTCAGAAGCCG
rJMSF025H03+          CGCAAATCTGGATTAATATCAACTCTGATTAGTCATCATTTTACATCAGTTCAGAAGCCG
rJMSF030I24+                                                                 AGCCG
rJMSF017P11+          CGCAAATCTGGATTAATATCAACTCTGATTAGTCATCATTTTACATCAGTTCAGAAGCCG
                      ____________________________________________________________
consensus             CGCAAATCTGGATTAATATCAACTCTGATTAGTCATCATTTTACATCAGTTCAGAAGCCG
 
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rJMSF028N22+          CCTCCACAGCCAGCTGATGTCAATATTAATTCCGCTGTTTATCCTGGTGGTCCTCCCGTT
rJMSF025H03+          CCTCCACAGCCAGCTGATGTCAATATTAATTCCGCTGTTTATCCTGGTGGTCCTCCCGTT
rJMSF030I24+          CCTCCACAGCCAGCTGATGTCAATATTAATTCCGCTGTTTATCCTGGTGGTCCTCCCGTT
rJMSF017P11+          CCTCCACAGCCAGCTGATGTCAATATTAATTCCGCTGTTTATCCTGGTGGTCCTCCCGTT
                      ____________________________________________________________
consensus             CCTCCACAGCCAGCTGATGTCAATATTAATTCCGCTGTTTATCCTGGTGGTCCTCCCGTT
 
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rJMSF028N22+          CCCATTCAAGCACCTAAACTCTTGAAGTTTGTTGATACAACTGAGATGACTAGAGGCCCA
rJMSF025H03+          CCCATTCAAGCACCTAAACTCTTGAAGTTTGTTGATACAACTGAGATGACTAGAGGCCCA
rJMSF030I24+          CCCATTCAAGCACCTAAACTCTTGAAGTTTGTTGATACAACTGAGATGACTAGAGGCCCA
rJMSF017P11+          CCCATTCAAGCACCTAAACTCTTGAAGTTTGTTGATACAACTGAGATGACTAGAGGCCCA
                      ____________________________________________________________
consensus             CCCATTCAAGCACCTAAACTCTTGAAGTTTGTTGATACAACTGAGATGACTAGAGGCCCA
 
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rJMSF028N22+          CAAGAAACACCTGGTTATTGGGTTGTTTCAGGGGCAAGGCTCATGGTTGAAAAGGGAAGG
rJMSF025H03+          CAAGAAACACCTGGTTATTGGGTTGTTTCAGGGGCAAGGCTCATGGTTGAAAAGGGAAGG
rJMSF030I24+          CAAGAAACACCTGGTTATTGGGTTGTTTCAGGGGCAAGGCTCATGGTTGAAAAGGGAAGG
rJMSF017P11+          CAAGAAACACCTGGTTATTGGGTTGTTTCAGGGGCAAGGCTCATGGTTGAAAAGGGAAGG
                      ____________________________________________________________
consensus             CAAGAAACACCTGGTTATTGGGTTGTTTCAGGGGCAAGGCTCATGGTTGAAAAGGGAAGG
 
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rJMSF028N22+          ATTTCCCTCAAGGTCAAGTATTCTCTACTCACTGTAATACAACCCGATGAAGGAACACTC
rJMSF025H03+          ATTTCCCTCAAGGTCAAGTATTCTCTACTCACTGTAATACAACCCGATGAAGGAACACTC
rJMSF030I24+          ATTTCCCTCAAGGTCAAGTATTCTCTACTCNCTGTAATACAACCCGATGAAGGAACNCTC
rJMSF017P11+          ATTTCCCTCAAGGTCAAGTATTCTCTACTCACTGTAATACAACCCGATGAAGGAACACTC
                      ____________________________________________________________
consensus             ATTTCCCTCAAGGTCAAGTATTCTCTACTCACTGTAATACAACCCGATGAAGGAACACTC
 
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rJMSF028N22+          GAGTAAACCAGAGGCAGGTCTTTTTATAGACCCTCTGGAAAGTGGAAACAACAGTATTCA
rJMSF025H03+          GAGTAAACCAGAGGCAGGTCTTTTTATAGACCCTCTGGAAAGTGGAAACAACAGTATTCA
rJMSF030I24+          GAGTAAACCAGAGGCAGGTCTTTTTATAGACCCTCTGGAAAGTGGAAACAACNGTATTCA
rJMSF017P11+          GAGTAAACCAGAGGCAGGTCTTTTTATAGACCCTCTGGAAAGTGGAAACAACAGTATTCA
                      ____________________________________________________________
consensus             GAGTAAACCAGAGGCAGGTCTTTTTATAGACCCTCTGGAAAGTGGAAACAACAGTATTCA
 
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rJMSF028N22+          GCGAGTTCCTAACTAAACCTTGGAGGGAAACTATGGTGATCTTTAGCAGTTCCAAGAAAC
rJMSF025H03+          GCGAGTTCCTAACTAAACCTTGGAGGGAAACTATGGTGATCTTTAGCAGTTCCAAGAAAC
rJMSF030I24+          GCGAGTTCCTAACTAAACCTTGGAGGGAAACTATGGTGATCTTTAGCAGTTCCAAGAAAC
rJMSF017P11+          GCGAGTTCCTAACTAAACCTTGGAGGGAAACTATGGTGATCTTTAGCAGTTCCAAGAAAC
                      ____________________________________________________________
consensus             GCGAGTTCCTAACTAAACCTTGGAGGGAAACTATGGTGATCTTTAGCAGTTCCAAGAAAC
 
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rJMSF028N22+          AACCTCGGAGGGTAACTATGGTGATCTTTAGCAGTTCCAAAGAACATGAAGAATCCCTGT
rJMSF025H03+          AACCTCGGAGGGTAACTATGGTGATCTTTAGCAGTTCCAAAGAACATGAAGAATCCCTGT
rJMSF030I24+          AACCTCGGAGGGTAACTATGGTGATCTTTAGCAGTTCCAAAGAACATGAAGAATCCCTGT
rJMSF017P11+          AACCTCGGAGGGTAACTATGGTGATCTTTAGCAGTTCCAAAGAACATGAAGAATCCCTGT
                      ____________________________________________________________
consensus             AACCTCGGAGGGTAACTATGGTGATCTTTAGCAGTTCCAAAGAACATGAAGAATCCCTGT
 
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rJMSF028N22+          AGTTCCTCATTCCTTATACTGGTGGAAGCACC-TTTAATTCAAAACTGGTGAAAGAGCCA
rJMSF025H03+          AGTTCCTCATTCCTTATACTGGTGGAAGCACC-TTTAATTCAAAACTGGTGAAAGAGCCA
rJMSF030I24+          AGTTCCTCATTCCTTATACTGGNGGAAGCNCC-TTTAATTCAAAACTGGTGAAAGAGCCA
rJMSF017P11+          AGTTCCTCATTCCTTATACTGGTGGAAGCACCTTTTAATTCAAAACTGGTGAAAGAGCCA
                      ____________________________________________________________
consensus             AGTTCCTCATTCCTTATACTGGTGGAAGCACC-TTTAATTCAAAACTGGTGAAAGAGCCA
 
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rJMSF028N22+          AAAGGGAGAACTTTGCTCTGTTAGTGTGTCTTTGTCATTGTTCTTCGTTTTGTTTT    
rJMSF025H03+          AAAGGGAGAACTTTGCTCTGTTAGTGTGTCTTTGTCATTGTTCTTCGTTTTGTTTTTGTC
rJMSF030I24+          AAAGGGAGAACTTTGCTCTGTTAGTGTGTCTTTGTCATTGTTCTTCGTTTTGTTTTTGTC
rJMSF017P11+          AAAGGGAGAACTTTGCTCTGTTAGTGTGTCTTTGTCATTGTTCTTCGTTTTGTTTTTGTC
                      ____________________________________________________________
consensus             AAAGGGAGAACTTTGCTCTGTTAGTGTGTCTTTGTCATTGTTCTTCGTTTTGTTTTTGTC
 
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rJMSF025H03+          AAGTTTTCTGTAAGTGTAACTCTAGTGTATT                             
rJMSF030I24+          AAGTTTTCTGTAAGNGTAACTCTAGNGTATTTACATAAAAATATGTTTAATCTATTGCAC
rJMSF017P11+          AAGTTTTCTGTAAGTGTAACTCTAGTGTATTTACATAAAAATATGTTTAATCTATTGCAC
                      ____________________________________________________________
consensus             AAGTTTTCTGTAAGTGTAACTCTAGTGTATTTACATAAAAATATGTTTAATCTATTGCAC
 
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rJMSF030I24+          TCTTCCTCAATTTCTCAAAAACNTGGAATCCNTGCATAACTACATAAAAAATCATCTGAA
rJMSF017P11+          TCTTCCTCAATTTCTC-AAAACATGGAATCCATGCATAACTACATAAAAAATCATCTGAA
                      ____________________________________________________________
consensus             TCTTCCTCAATTTCTCAAAAACATGGAATCCATGCATAACTACATAAAAAATCATCTGAA