Contig 012576:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034A15Sequence495000945 (4)ref|XP_011013609.1|8e-70PREDICTED: probable transporter mch1 [Populus euphratica]752012576 (4)ref|XP_009766430.1|238PREDICTED: uncharacterized protein LOC104217799 [Nicotiana sylvestris]
JMSF017D09Sequence231000945 (4)ref|XP_004248658.1|3e-09PREDICTED: probable transporter mch1 [Solanum lycopersicum]784012576 (4)emb|CDO96930.1|3e-76unnamed protein product [Coffea canephora]
JMSF035F16Sequence658000945 (4)ref|XP_011092895.1|1e-114PREDICTED: probable transporter mch1 [Sesamum indicum]697012576 (4)emb|CDO96930.1|2e-83unnamed protein product [Coffea canephora]
JMSF044J01Sequence730000945 (4)ref|XP_011092895.1|4e-123PREDICTED: probable transporter mch1 [Sesamum indicum]812012576 (4)ref|XP_004248658.1|1e-131PREDICTED: probable transporter mch1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF044J01+                             GCCCCGCCGGCGGCAGTGAATGATGCGGTAAAAGACGCCAC
                      ____________________________________________________________
consensus                                GCCCCGCCGGCGGCAGTGAATGATGCGGTAAAAGACGCCAC
 
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rJMFF034A15+                       AGACCATACAATNTTNGAGGCCATGAAGACGGTTGACTTTTGGATAC
rJMSF044J01+          CCGTCATTGGGGAAGACCATACAATCTTCGAGGCCATGAAGACGGTTGACTTTTGGATAC
                      ____________________________________________________________
consensus             CCGTCATTGGGGAAGACCATACAATCTTCGAGGCCATGAAGACGGTTGACTTTTGGATAC
 
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rJMFF034A15+          TGTTTGTGTCATTTCTGTGTGGAGTGGGAACAGGATTAGCGGTGATGAATAACATGGGAC
rJMSF044J01+          TGTTTGTGTCATTTCTGTGTGGAGTGGGAACAGGATTAGCGGTGATGAATAACATGGGAC
                      ____________________________________________________________
consensus             TGTTTGTGTCATTTCTGTGTGGAGTGGGAACAGGATTAGCGGTGATGAATAACATGGGAC
 
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rJMFF034A15+          AGATGGGATTGGCTCTTGGTTATGCAGACGTTTCAATCTTTGTTTCGCTCACCAGCATTT
rJMSF044J01+          AGATGGGATTGGCTCTTGGTTATGCAGACGTTTCAATCTTTGTTTCGCTCACCAGCATTT
                      ____________________________________________________________
consensus             AGATGGGATTGGCTCTTGGTTATGCAGACGTTTCAATCTTTGTTTCGCTCACCAGCATTT
 
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rJMFF034A15+          GGGGATTTTTTGGGCGCATCTTTTCTGGTTCCGTTTCAGAATACTTCATCAAGAAAGCTG
rJMSF044J01+          GGGGATTTTTTGGGCGCATCTTTTCTGGTTCCGTTTCAGAATACTTCATCAAGAAAGCTG
rJMSF035F16+                               TTTCTGGTTCCGTTTCAGAATACTTCATCAAGAAAGCTG
                      ____________________________________________________________
consensus             GGGGATTTTTTGGGCGCATCTTTTCTGGTTCCGTTTCAGAATACTTCATCAAGAAAGCTG
 
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rJMFF034A15+          GAACACCCAGGCCCGGTATGGAACGCAGCTTCACAGATTATAATGGCGGTTGGATACATA
rJMSF044J01+          GAACACCCAGG-CCGGTATGGAACGCAGCTTCACAGATTATAATGGCGGTTGGATACATA
rJMSF035F16+          GAACACCCAGG-CCGGTATGGAACGCAGCTTCACAGATTATAATGGCGGTTGGATACATA
rJMSF017D09+                      CCGGTATGGAACGCAGCTTCACAGATTATAATGGCGGTNGGATACATA
                      ____________________________________________________________
consensus             GAACACCCAGG-CCGGTATGGAACGCAGCTTCACAGATTATAATGGCGGTTGGATACATA
 
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rJMFF034A15+          ATGATGGCCATGGCTCTGCCGGGCTCACTGTACGTGGGGTCCATTGTAGTCGGAATTTGC
rJMSF044J01+          ATGATGGCCATGGCTCTGCCGGGCTCACTGTACGTGGGGTCCATTGTAGTCGGAATTTGC
rJMSF035F16+          ATGATGGCCATGGCTCTGCCGGGCTCACTGTACGTGGGGTCCATTGTAGTCGGAATTTGC
rJMSF017D09+          ATGATGGCCATGGCTCTGCCGGGCTCACTGTACGTGGGGTCCATTGTAGTCGGAATTTGC
                      ____________________________________________________________
consensus             ATGATGGCCATGGCTCTGCCGGGCTCACTGTACGTGGGGTCCATTGTAGTCGGAATTTGC
 
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rJMFF034A15+          TATGGAGTTCGTCTTGCTGTAACGGTGCCGACTGCATCTGAACTCTTTGGCCTCAAGTAC
rJMSF044J01+          TATGGAGTTCGTCTTGCTGTAACGGTGCCGACTGCATCTGAACTCTTTGGCCTCAAGTAC
rJMSF035F16+          TATGGAGTTCGTCTTGCTGTAACGGTGCCGACTGCATCTGAACTCTTTGGCCTCAAGTAC
rJMSF017D09+          TATGGAGTTCGTCTTGCTGTAACGGTGCCGACTGCATCTGAACTCTTTGGCCTCAAGTAC
                      ____________________________________________________________
consensus             TATGGAGTTCGTCTTGCTGTAACGGTGCCGACTGCATCTGAACTCTTTGGCCTCAAGTAC
 
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rJMFF034A15+          TACGGCCTCATTTACAACGTTCTCATCATCAACCTTCCACTGGGATCATTCCTCTTCTCC
rJMSF044J01+          TACGGCCTCATTTACAACGTTCTCATCATCAACCTTCCACTGGGATCATTCCTCTTCTCC
rJMSF035F16+          TACGGCCTCATTTACAACGTTCTCATCATCAACCTTCCACTGGGATCATTCCTCTTCTCC
rJMSF017D09+          TACGGCCTCATTTACAACGTTCTCATCATCAACCTTCCACTGGGATCATTCCTCTTCTCC
                      ____________________________________________________________
consensus             TACGGCCTCATTTACAACGTTCTCATCATCAACCTTCCACTGGGATCATTCCTCTTCTCC
 
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rJMFF034A15+          GGTTTGCTCGCCGGACTGTTATACGATGCCGAGGCTACTCAGACTGCCGGCGGCGGCAAT
rJMSF044J01+          GGTTTGCTCGCCGGACTGTTATACGATGCCGAGGCTACTCAGACTGCCGGCGGCGGCAAT
rJMSF035F16+          GGTTTGCTCGCCGGACTGTTATACGATGCCGAGGCTACTCAGACTGCCGGCGGCGGCAAT
rJMSF017D09+          GGTTTGCTCGCCGGACTGTTATACGATGCCGAGGCTACTCAGACTGCCGGCGGCGGCAAT
                      ____________________________________________________________
consensus             GGTTTGCTCGCCGGACTGTTATACGATGCCGAGGCTACTCAGACTGCCGGCGGCGGCAAT
 
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rJMFF034A15+          ACGTGCGTCGGCGCACACTGCTATAGGCTGGTGTTTATAGTGATGGCTATTGCGTGTGTG
rJMSF044J01+          ACGTGCGTCGGCGCACACTGCTATAGGCTGGTGTTTATAGTGATGGCTATTGCGTGTGTG
rJMSF035F16+          ACGTGCGTCGGCGCACACTGCTATAGGCTGGTGTTTATAGTGATGGCTATTGCGTGTGTG
rJMSF017D09+          ACGTGCGTCGGCGCACACTGCTATAGGCTGGTGTTTATAGTGATGGCTATTGCGTGTGTG
                      ____________________________________________________________
consensus             ACGTGCGTCGGCGCACACTGCTATAGGCTGGTGTTTATAGTGATGGCTATTGCGTGTGTG
 
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rJMFF034A15+          GTTGGTTTTGGACTGGACGTCCTACTTTCCATCCGAACCAGAGCCCTTTATTCCAAGGTT
rJMSF044J01+          GTTGGTTTTGGACTGGACGTCCTACTTTCCATCCGAACCAGAGCCCTTTATTCCAAGATT
rJMSF035F16+          GTTGGTTTTGGACTGGACGTCCTACTTTCCATCCGAACCAGAGCCCTTTATTCCAAGATT
rJMSF017D09+          GTTGGTTTTGGACTGGACGTCCTACTTTCCATCCGAACCAGAGCCCTTTATTCCAAGATT
                      ____________________________________________________________
consensus             GTTGGTTTTGGACTGGACGTCCTACTTTCCATCCGAACCAGAGCCCTTTATTCCAAGATT
 
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rJMFF034A15+          TATGCAGCTAGGAAAGCCAAGAAGACTGCACCTTCCTTGTCTTGAGCTCTCATGTCGGCC
rJMSF044J01+          TATGCAGCTAGGAAAGCCAAGAAGACTGCACCTTCCTTGTCTTGAGCTCTCATGTCGGCC
rJMSF035F16+          TATGCAGCTAGGAAAGCCAAGAAGACTGCACCTTCCTTGTCTTGAGCTCTCATGTCGGCC
rJMSF017D09+          TATGCAGCTAGGAAAGCCAAGAAGACTGCACCTTCCTTGTCTTGAGCTCTCATGTCGGCC
                      ____________________________________________________________
consensus             TATGCAGCTAGGAAAGCCAAGAAGACTGCACCTTCCTTGTCTTGAGCTCTCATGTCGGCC
 
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rJMFF034A15+          GGTTTATTTCCCCCAAAAAAATT                                     
rJMSF044J01+          GGTTTATTTCCCCCAAAAAAATT                                     
rJMSF035F16+          GGTTTATTTCCCCCAAAAAAATTTGTTTGATCCATTTGAATTTGTATGAATGGAATGGAA
rJMSF017D09+          GGTTTATTTCCCCCAAAAAAATTTGTTTGATCCATTTGAATTTGTATGAATGGAATGGAA
                      ____________________________________________________________
consensus             GGTTTATTTCCCCCAAAAAAATTTGTTTGATCCATTTGAATTTGTATGAATGGAATGGAA
 
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rJMSF035F16+          TGAATAATCGATTCTTTTTCCTACTGTTATATATTATATGTATATTAGAATAATAGTCAA
rJMSF017D09+          TGAATAATCGATTCTTTTTCCTACTGTTATATATTATATGTATATTAGAATAATAGTCAA
                      ____________________________________________________________
consensus             TGAATAATCGATTCTTTTTCCTACTGTTATATATTATATGTATATTAGAATAATAGTCAA
 
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rJMSF035F16+          GAAAGACCTAGGTGCCTTTTGAGCAGAGCACAAGATGCTTGGCTCCTCTCCTTATAAGT 
rJMSF017D09+          GAAAGACCTAGGTGCCTTTTGAGCAGAGCACAAGATGCTTGGCTCCTCTCCTTATAAGTG
                      ____________________________________________________________
consensus             GAAAGACCTAGGTGCCTTTTGAGCAGAGCACAAGATGCTTGGCTCCTCTCCTTATAAGTG
 
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rJMSF017D09+          TTTTGTTAGTGAGTTGTGAAATATAAAATCAGAGAATCAATAACTGATGATGGGATAATA
                      ____________________________________________________________
consensus             TTTTGTTAGTGAGTTGTGAAATATAAAATCAGAGAATCAATAACTGATGATGGGATAATA
 
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rJMSF017D09+          CATGCAATTTAGTAGGATTTGGCTTGGGTTGGGTTTGAGTGGTCCATCCAAGTCCAGTAC
                      ____________________________________________________________
consensus             CATGCAATTTAGTAGGATTTGGCTTGGGTTGGGTTTGAGTGGTCCATCCAAGTCCAGTAC