Contig 012570:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003L13Sequence382008719 (11)691012570 (2)emb|CBI21587.3|7e-43unnamed protein product [Vitis vinifera]
JMSF016C05Sequence375008719 (11)787012570 (2)ref|XP_011089568.1|2e-66PREDICTED: LOW QUALITY PROTEIN: auxilin-related protein 2-like [Sesamum indicum

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016C05+ CAGGAAG
                      ____________________________________________________________
consensus CAGGAAG
 
. : . : . : . : . : . :
rJMSF016C05+ AAAGACATAGGATTGCGGAGACTTTGGATATTGAAATCAAGCGATGGGCTGCTGGGAAGG
                      ____________________________________________________________
consensus AAAGACATAGGATTGCGGAGACTTTGGATATTGAAATCAAGCGATGGGCTGCTGGGAAGG
 
. : . : . : . : . : . :
rJMSF003L13+ TGCAATATGTTCTTTGGCCTGAATGTGGTT
rJMSF016C05+ AAGGAAATCTGCGTGCACTTCTATCAACTCTGCAATATGTTCTTTGGCCTGAATGTGGTT
                      ____________________________________________________________
consensus AAGGAAATCTGCGTGCACTTCTATCAACTCTGCAATATGTTCTTTGGCCTGAATGTGGTT
 
. : . : . : . : . : . :
rJMSF003L13+ GGCACCCTGTTTCCTTGACAGACTTGATTACCGGTGCATCTGTCAAGAAAGTATATAGAA
rJMSF016C05+ GGCACCCTGTTTCCTTGACAGACTTGATTACCGGTGCATCTGTCAAGAAAGTATATAGAA
                      ____________________________________________________________
consensus GGCACCCTGTTTCCTTGACAGACTTGATTACCGGTGCATCTGTCAAGAAAGTATATAGAA
 
. : . : . : . : . : . :
rJMSF003L13+ AAGCAACCCTTTGTATACATCCTGATAAGGTGCAACAGAAAGGTGCTACTCTTCAGCAGA
rJMSF016C05+ AAGCAACCCTTTGTATACATCCTGATAAGGTGCAACAGAAAGGTGCTACTCTTCAGCAGA
                      ____________________________________________________________
consensus AAGCAACCCTTTGTATACATCCTGATAAGGTGCAACAGAAAGGTGCTACTCTTCAGCAGA
 
. : . : . : . : . : . :
rJMSF003L13+ AATATATTGCTGAGAAGGTCTTTGATCTCCTGAAGGAAGCATGGAACAAATTTAACTCGG
rJMSF016C05+ AATATATTGCTGAGAAGGTCTTTGATCTCCTGAAGGAAGCATGGAACAAATTTAACTCGG
                      ____________________________________________________________
consensus AATATATTGCTGAGAAGGTCTTTGATCTCCTGAAGGAAGCATGGAACAAATTTAACTCGG
 
. : . : . : . : . : . :
rJMSF003L13+ AGGAGCTTTTCTAGATCTACATTCATTGATTACTTTTGAATGGCTCTTGGACTACTATCT
rJMSF016C05+ AGGAGCTTTTCTAGATCTACATTCATTGATTACTTTTGAATGGCTCTTGGACTACTATCT
                      ____________________________________________________________
consensus AGGAGCTTTTCTAGATCTACATTCATTGATTACTTTTGAATGGCTCTTGGACTACTATCT
 
. : . : . : . : . : . :
rJMSF003L13+ ATAGAAGTTGTGTGCACAGTTACCAGAGATGCTCATGCTATGATGCCCACAATTTTTTCG
rJMSF016C05+ ATAGAAGTTGTGTGCACAGTTACCAGAGATGCTCATGCTATGATGCCCACAATTTTTTCG
                      ____________________________________________________________
consensus ATAGAAGTTGTGTGCACAGTTACCAGAGATGCTCATGCTATGATGCCCACAATTTTTTCG
 
. : . : . : . : . : . :
rJMSF003L13+ TGCCCATTGGTGTTGGATCTTGCTTCTTGCAAGCTGCTGGTATGGGGTGAAGCATTTGTA
rJMSF016C05+ TGCCCATTGGTGTTGGATCTTGCTTCTTGCAAGCTGCTGGTATGGGGTGAAGCATTTGTA
                      ____________________________________________________________
consensus TGCCCATTGGTGTTGGATCTTGCTTCTTGCAAGCTGCTGGTATGGGGTGAAGCATTTGTA
 
. : . : . : . : . : . :
rJMSF003L13+ GCTGCTGCTGAGATGCATGGTAAAGTAAAATATACGACCGTTGTAAATTGTTTCAATGCC
rJMSF016C05+ GCTGCTGCTGAGATGCATGGTAAAGTAAAATATACGACCGTTGTAAATTGTTTCAATGCC
                      ____________________________________________________________
consensus GCTGCTGCTGAGATGCATGGTAAAGTAAAATATACGACCGTTGTAAATTGTTTCAATGCC
 
. : . : . : . : . : . :
rJMSF003L13+ AGAGAGGGGTTATACGGCATTTGAAGTGACTGGTTGGTGTAGACTAGTATTATATCCAAT
rJMSF016C05+ AGAGAGGGGTTATACGGCATTTGAAGTGACTGGTTGGTGTAGACTAGTATTATATCCAAT
                      ____________________________________________________________
consensus AGAGAGGGGTTATACGGCATTTGAAGTGACTGGTTGGTGTAGACTAGTATTATATCCAAT
 
. : . : . : . : . : . :
rJMSF003L13+ CTTCCTGTGCTTCTATGTCACATTTGATTGCCCACTTCATCTGCATCAGATGATTATTTT
rJMSF016C05+ CTTCCTGTGCTTCTATGTCACATTTGATTGCCCACTTCATCTGCATCAGATGATTATTTT
                      ____________________________________________________________
consensus CTTCCTGTGCTTCTATGTCACATTTGATTGCCCACTTCATCTGCATCAGATGATTATTTT
 
. : . : . : . : . : . :
rJMSF003L13+ GTTTGTTTTTGCCAATTCTTTATGCTTCTTGTTAAAGTTCGCATTTGTTTGTGTAAGAGA
rJMSF016C05+ GTTTGTTTTTGCCAATTCTTTATGCTTCTTGTTAAAGTTCGCATTTGTTTGTGTAAGAGA
                      ____________________________________________________________
consensus GTTTGTTTTTGCCAATTCTTTATGCTTCTTGTTAAAGTTCGCATTTGTTTGTGTAAGAGA
 
. : . : . : . : . : . :
rJMSF003L13+ GATGTTTTCTTTTCCCCCCTCTAATCTCCATACATAAATCTTCAGGAGAACCGCATTCA
rJMSF016C05+ GATGTTTTCTTTTCCCCCCTCTAATCTCCATACATAAATCTTCAGGAGAACCGCATTCAT
                      ____________________________________________________________
consensus GATGTTTTCTTTTCCCCCCTCTAATCTCCATACATAAATCTTCAGGAGAACCGCATTCAT