Contig 012568:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF016A04+                                                              GGAGCTCA
                      ____________________________________________________________
consensus                                                                 GGAGCTCA
 
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rJMSF016A04+          CTGCCATCTNGGATCTACAATAACCAAAGTAGACATTTTCAGAGATGCTGCAGTTTTGAT
                      ____________________________________________________________
consensus             CTGCCATCTNGGATCTACAATAACCAAAGTAGACATTTTCAGAGATGCTGCAGTTTTGAT
 
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rJMSF016O08+                 TACATCGATCAAATCCGAGCTCAGGGATTTGAAATTGATTTCTTGAATATTGG
rJMSF016A04+          GGTTGCCTACATCGATCAAATCCGAGCTCAGGGATTTGAAATTGATTTCTTGAATATTGG
                      ____________________________________________________________
consensus             GGTTGCCTACATCGATCAAATCCGAGCTCAGGGATTTGAAATTGATTTCTTGAATATTGG
 
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rJMSF016O08+          AGGTGGGCTGGGGATTGATTATTATCATGCTGGAGCCATCCTTCCCTCACCTAGAGATCT
rJMSF016A04+          AGGTGGGCTGGGGATTGATTATTATCATGCTGGAGCCATCCTTCCCTCACCTAGAGATCT
                      ____________________________________________________________
consensus             AGGTGGGCTGGGGATTGATTATTATCATGCTGGAGCCATCCTTCCCTCACCTAGAGATCT
 
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rJMSF016O08+          AATTGATACAGTTCGGGAATTGGTTGTATCACGAAACCTCAATCTCATCATTGAACCGGG
rJMSF016A04+          AATTGATACAGTTCGGGAATTGGTTGTATCACGAAACCTCAATCTCATCATTGAACCGGG
                      ____________________________________________________________
consensus             AATTGATACAGTTCGGGAATTGGTTGTATCACGAAACCTCAATCTCATCATTGAACCGGG
 
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rJMSF016O08+          AAGATCACTTATTGCTAATACGTGCTGCTTGGTCAACCGTGTCACTGGAGTTAAAACCAA
rJMSF016A04+          AAGATCACTTATTGCTAATACGTGCTGCTTGGTCAACCGTGTCACTGGAGTTAAAACCAA
                      ____________________________________________________________
consensus             AAGATCACTTATTGCTAATACGTGCTGCTTGGTCAACCGTGTCACTGGAGTTAAAACCAA
 
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rJMSF016O08+          TGGCACGAAAAATTTCATTGTAATTGATGGTAGCATGTCAGAACTTATACGTCCAAGTCT
rJMSF016A04+          TGGCACGAAAAATTTCATTGTAATTGATGGTAGCATGTCAGAACTTATACGTCCAAGTCT
                      ____________________________________________________________
consensus             TGGCACGAAAAATTTCATTGTAATTGATGGTAGCATGTCAGAACTTATACGTCCAAGTCT
 
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rJMSF016O08+          CTATGATGCTTACCAGCACATAGAGCTAGTTTCTCCTACACCCTCAGAATCCGAGGTTTC
rJMSF016A04+          CTATGATGCTTACCAGCACATAGAGCTAGTTTCTCCTACACCCTCAGAATCCGAGGTTTC
                      ____________________________________________________________
consensus             CTATGATGCTTACCAGCACATAGAGCTAGTTTCTCCTACACCCTCAGAATCCGAGGTTTC
 
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rJMSF016O08+          TACTTTTGATGTTGTGGGTCCCGTATGTGAGTCTGCAGATTTCTTGGGAAAGAATAGAGA
rJMSF016A04+          TACTTTTGATGTTGTGGGTCCCGTATGTGAGTCTGCAGATTTCTTGGGAAAAAATAGAGA
                      ____________________________________________________________
consensus             TACTTTTGATGTTGTGGGTCCCGTATGTGAGTCTGCAGATTTCTTGGGAAAGAATAGAGA
 
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rJMSF016O08+          ACTTCCCACCCCTCCTAGGGGTTCTGGCTTGGTAGTTCATGACGCCGGTGCCTATTGCAT
rJMSF016A04+          ACTTCCCACCCCTCCTAGGGGTTCTGGCTTGGTAGTTCATGACGCCGGTGCCTATTGCAT
                      ____________________________________________________________
consensus             ACTTCCCACCCCTCCTAGGGGTTCTGGCTTGGTAGTTCATGACGCCGGTGCCTATTGCAT
 
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rJMSF016O08+          GAGTATGGCATCAACCTACAATCTAAAGATGCGCCCCCCTGAGTATTGGGTTGAAGAGGA
rJMSF016A04+          GAGTATGGCATCAACCTACAATCTAAAGATGCGCCCCCCTGAGTATTGGGTTGAAGAGGA
                      ____________________________________________________________
consensus             GAGTATGGCATCAACCTACAATCTAAAGATGCGCCCCCCTGAGTATTGGGTTGAAGAGGA
 
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rJMSF016O08+          TGGAAATGTGTCGAAAATCAGGCACGCAGAAACATTCGAAGACCACCTGAGATTCTTTGA
rJMSF016A04+          TGGAAATGTGTCGAAAATCAGGCACGCAGAAACATTCGAAGACCACCTGAGATTCTTTGA
                      ____________________________________________________________
consensus             TGGAAATGTGTCGAAAATCAGGCACGCAGAAACATTCGAAGACCACCTGAGATTCTTTGA
 
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rJMSF016O08+          GGGTCTCTAATTCCTCGGTCGTTTCAGCAGTTTCCTTTCTGTAGTTGCTTTCTTGTTTCC
rJMSF016A04+          GGGTCTCTAATTCCTCGGTCGTTTCAGCAGTTTCCTTTCTGTAGTTGCTTTCTTGTTTCC
                      ____________________________________________________________
consensus             GGGTCTCTAATTCCTCGGTCGTTTCAGCAGTTTCCTTTCTGTAGTTGCTTTCTTGTTTCC
 
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rJMSF016O08+          TTTCTGTAGTTGCTTTCTTTATTCTGTACCAAACTATTGTACTTT               
rJMSF016A04+          TTTCTGTAGTTGCTTTCTTTATTCTGTACCAAACTATTGTACTTTGTTTTTGAGACCCCA
                      ____________________________________________________________
consensus             TTTCTGTAGTTGCTTTCTTTATTCTGTACCAAACTATTGTACTTTGTTTTTGAGACCCCA