Contig 012557:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014A12Sequence460000918 (2)ref|XP_011078871.1|2e-18PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Se734012557 (2)ref|XP_007156131.1|3e-06hypothetical protein PHAVU_003G261200g [Phaseolus vulgaris] gb|ESW28125.1| hypot
JMSF042C16Sequence809000918 (2)emb|CDP14455.1|2e-57unnamed protein product [Coffea canephora]736012557 (2)ref|XP_007156131.1|4e-07hypothetical protein PHAVU_003G261200g [Phaseolus vulgaris] gb|ESW28125.1| hypot

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042C16+ TATCAAGAATGGTTAATAACAAAGGATGGGTGATTGCTTTTTATCACTAAAGCTTGT
                      ____________________________________________________________
consensus TATCAAGAATGGTTAATAACAAAGGATGGGTGATTGCTTTTTATCACTAAAGCTTGT
 
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rJMSF042C16+ TGCTGTGAAGTTGGTGATAGACGGAATAAAAAGGATGAATGCCCCAAAACAATGGATGCT
                      ____________________________________________________________
consensus TGCTGTGAAGTTGGTGATAGACGGAATAAAAAGGATGAATGCCCCAAAACAATGGATGCT
 
. : . : . : . : . : . :
rJMSF042C16+ GCACAAATGGCCGTGAATTCCCTTATCTACTGATTTTCCCTATGACACTAAGGGGTGATT
rJMSF014A12+ ACTAAGGGGTGATT
                      ____________________________________________________________
consensus GCACAAATGGCCGTGAATTCCCTTATCTACTGATTTTCCCTATGACACTAAGGGGTGATT
 
. : . : . : . : . : . :
rJMSF042C16+ TTAACTTTGCACTATTAGAGCTGAGGTGTCTAAGTTCAAACTGTGCAACATTCAATAGTG
rJMSF014A12+ TCAACTTTGCACTATTAGAGCTGAGGTGTCTAAGTTCAAACTGTGCAACATTCAATAGTG
                      ____________________________________________________________
consensus TTAACTTTGCACTATTAGAGCTGAGGTGTCTAAGTTCAAACTGTGCAACATTCAATAGTG
 
. : . : . : . : . : . :
rJMSF042C16+ CATTTTGGGAAGAATGGCATCCCTTAAATCAATAGTGCTATGATGGTGAACTGCCTGCTA
rJMSF014A12+ CATTTTGGGAAGAATGGCATCCCTTAAATCAATAGTGCTATGATGGTGAACTGCCTGCTA
                      ____________________________________________________________
consensus CATTTTGGGAAGAATGGCATCCCTTAAATCAATAGTGCTATGATGGTGAACTGCCTGCTA
 
. : . : . : . : . : . :
rJMSF042C16+ TCCAGATTCACACATAAAGGCTTATCATACCATCAAGCTTGAGTTCCATTGAGTTTGAGG
rJMSF014A12+ TCCAGATTCACACATAAAGGCTTATCATACCATCAAGCTTGAGTTCCATTGAGTTTGAGG
                      ____________________________________________________________
consensus TCCAGATTCACACATAAAGGCTTATCATACCATCAAGCTTGAGTTCCATTGAGTTTGAGG
 
. : . : . : . : . : . :
rJMSF042C16+ TTGGAAATGTTGCCATGGTGAGTGGTGACTGGTGGAAGGAATTGGAGACTTGGCAGTGCG
rJMSF014A12+ TTGGAAATGTTGCCATGGTGAGTGGTGACTGGTGGAAGGAATTGGAGACTTGGCAGTGCG
                      ____________________________________________________________
consensus TTGGAAATGTTGCCATGGTGAGTGGTGACTGGTGGAAGGAATTGGAGACTTGGCAGTGCG
 
. : . : . : . : . : . :
rJMSF042C16+ ATCAATAACAGGGAGATGCACAAAGGAACCTTTGAGACCAATAGACCATTGATATCCACG
rJMSF014A12+ ATCAATAACAGGGAGATGCACAAAGGAACCTTTGAGACCAATAGACCATTGATATCCACG
                      ____________________________________________________________
consensus ATCAATAACAGGGAGATGCACAAAGGAACCTTTGAGACCAATAGACCATTGATATCCACG
 
. : . : . : . : . : . :
rJMSF042C16+ ATGCTCTTGGTCAGGAGTTCTCCACTCGGTTGGACATCTTTACAATTGGGAAAGTTNTGA
rJMSF014A12+ ATGCTCTTGGTCAGGAGTTCTCCACTCGGTTGGACATCTTTACAATTGGGAAAGTTCTGA
                      ____________________________________________________________
consensus ATGCTCTTGGTCAGGAGTTCTCCACTCGGTTGGACATCTTTACAATTGGGAAAGTTCTGA
 
. : . : . : . : . : . :
rJMSF042C16+ TGCATCTGGGCTTCCTTCTGTAGGGCAAAGGTATCAAATTGTCAATCTTGCAGCTCAATC
rJMSF014A12+ TGCATCTGGGCTTCCTTCTGTAGGGCAAAGGTATCAAATTGTCAATCTTGCAGCTCAATC
                      ____________________________________________________________
consensus TGCATCTGGGCTTCCTTCTGTAGGGCAAAGGTATCAAATTGTCAATCTTGCAGCTCAATC
 
. : . : . : . : . : . :
rJMSF042C16+ AGTGCCAAATGCATAACATGATTACGAGTATATGTTAGTGCTAGAAACTTTGCCCAGAGG
rJMSF014A12+ AGTGCCAAATGCATAACATGATTACGAGTATATGTTAGTGCTAGAAACTTTGCCCAGAGG
                      ____________________________________________________________
consensus AGTGCCAAATGCATAACATGATTACGAGTATATGTTAGTGCTAGAAACTTTGCCCAGAGG
 
. : . : . : . : . : . :
rJMSF042C16+ GGAATCTACCCACCATTTTTTTTTGGCATGGGCATAGTTGGTATTACTTTGATCCGATTG
rJMSF014A12+ GGAATCTACCCACCATTTTTTTTTGGCATGGGCATAGTTGGTATTACTTTGATCCGATTG
                      ____________________________________________________________
consensus GGAATCTACCCACCATTTTTTTTTGGCATGGGCATAGTTGGTATTACTTTGATCCGATTG
 
. : . : . : . : . : . :
rJMSF042C16+ ATTCATGCT
rJMSF014A12+ ATTCATGCTTGAAATTTTGTTTTTCAATAGCTAACTGCTACATTTAGTCTGCCAGATCAA
                      ____________________________________________________________
consensus ATTCATGCTTGAAATTTTGTTTTTCAATAGCTAACTGCTACATTTAGTCTGCCAGATCAA
 
. : . : . : . : . : . :
rJMSF014A12+ CTTGTGTCTAATTTTTGTGATAGATTAAACCTGTAAATTAAATACGGATAAACACTTTGC
                      ____________________________________________________________
consensus CTTGTGTCTAATTTTTGTGATAGATTAAACCTGTAAATTAAATACGGATAAACACTTTGC
 
. : . : . : . : . : . :
rJMSF014A12+ CTTTGAGCCTCTTAATTTCTCACTGGCACAAGTGAATCATCACATATCAACCATTAAAAG
                      ____________________________________________________________
consensus CTTTGAGCCTCTTAATTTCTCACTGGCACAAGTGAATCATCACATATCAACCATTAAAAG