| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS021A06 | Sequence | 619 | 012552 (9) | ref|XP_008236777.1| | 95.5 | PREDICTED: phospholipase A-2-activating protein [Prunus mume] | |||||
| JMSF011H06 | Sequence | 404 | 006643 (10) | ref|XP_009605022.1| | 188 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 696 | 012552 (9) | ref|XP_006365506.1| | 7e-65 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
| JMSF012H06 | Sequence | 554 | 006643 (10) | ref|XP_009605022.1| | 279 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 699 | 012552 (9) | ref|XP_006365506.1| | 7e-65 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
| JMSF012H16 | Sequence | 494 | 006643 (10) | ref|XP_009605022.1| | 218 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 751 | 012552 (9) | ref|XP_006365506.1| | 1e-64 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
| JMSF024H24 | Sequence | 636 | 012552 (9) | ref|XP_008236777.1| | 97.4 | PREDICTED: phospholipase A-2-activating protein [Prunus mume] | 772 | 020395 | ref|XP_009590684.1| | 9e-26 | PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Nicotiana tomentosifor |
| JMSF026M15 | Sequence | 635 | 006643 (10) | ref|XP_009605022.1| | 305 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 720 | 012552 (9) | ref|XP_006365506.1| | 8e-60 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
| JMSF037K02 | Sequence | 617 | 006643 (10) | ref|XP_009605022.1| | 290 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 701 | 012552 (9) | ref|XP_006365506.1| | 6e-63 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
| JMSF039I02 | Sequence | 641 | 006643 (10) | ref|XP_009605022.1| | 288 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 788 | 012552 (9) | ref|XP_006365506.1| | 1e-78 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
| JMSF042O14 | Sequence | 774 | 006643 (10) | ref|XP_009605022.1| | 369 | PREDICTED: phospholipase A-2-activating protein [Nicotiana tomentosiformis] | 648 | 012552 (9) | ref|XP_006365506.1| | 8e-53 | PREDICTED: phospholipase A-2-activating protein-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS021A06- TCAGCCTCTCTTTTATTTTTCAGTTTCCTCTCTCACGTCACACTCTCTCTAAAAAT
____________________________________________________________
consensus TCAGCCTCTCTTTTATTTTTCAGTTTCCTCTCTCACGTCACACTCTCTCTAAAAAT
. : . : . : . : . : . :
JMFS021A06- CCAGATCTACGCCTCTCTCTCTAAAAATCTAGATCTGGGGTGGAGGCGGTGCGGAGGTGC
____________________________________________________________
consensus CCAGATCTACGCCTCTCTCTCTAAAAATCTAGATCTGGGGTGGAGGCGGTGCGGAGGTGC
. : . : . : . : . : . :
JMFS021A06- TTGGCGGTTTCCACGCACCACTCGGCGTCTTCCCGGAGGCCGGCGCGGCCCTTGGTGCTC
____________________________________________________________
consensus TTGGCGGTTTCCACGCACCACTCGGCGTCTTCCCGGAGGCCGGCGCGGCCCTTGGTGCTC
. : . : . : . : . : . :
JMFS021A06- AAGCTGTACCAGAGGTTGATTTAGAATTATCTTCACTGTGGCTTAACAACAGCTACTGCA
JMSF024H24- A
____________________________________________________________
consensus AAGCTGTACCAGAGGTTGATTTAGAATTATCTTCACTGTGGCTTAACAACAGCTACTGCA
. : . : . : . : . : . :
JMFS021A06- GCAAAACCTACTCTCAAGCATGTCCCTAAGGAGAGACGAAATAAATTGTCAATAAATGAT
JMSF024H24- GCAAAACCTACTCTCAAGCATGTCCCTAAGGAGAGACGAAATAAATTGTCAATAAATGAT
____________________________________________________________
consensus GCAAAACCTACTCTCAAGCATGTCCCTAAGGAGAGACGAAATAAATTGTCAATAAATGAT
. : . : . : . : . : . :
JMFS021A06- GCTGATCTATCAAGATTGCTATTGTTAAAATTCTGAAAAGATACATCACACTATCACACC
JMSF024H24- GCTGATCTATCAAGATTGCTATTGTTAAAATTCTGAAAAGATACATCACACTATCACACC
____________________________________________________________
consensus GCTGATCTATCAAGATTGCTATTGTTAAAATTCTGAAAAGATACATCACACTATCACACC
. : . : . : . : . : . :
JMFS021A06- AGTAGATTTTCATATGTCGATCTTGCATTGGTTCTGAGGTTGCTTAAGACATGGCCATTA
JMSF024H24- AGTAGATTTTCATATGTCGATCTTGCATTGGTTCTGAGGTTGCTTAAGACATGGCCATTA
____________________________________________________________
consensus AGTAGATTTTCATATGTCGATCTTGCATTGGTTCTGAGGTTGCTTAAGACATGGCCATTA
. : . : . : . : . : . :
JMFS021A06- TCAATGCTATTTCCTGTTATTGATATCTTGAGGATGATAATTTTACACCAGATGGGGCAA
JMSF024H24- TCAATGCTATTTCCTGTTATTGATATCTTGAGGATGATAATTTTACACCAGATGGGGCAA
____________________________________________________________
consensus TCAATGCTATTTCCTGTTATTGATATCTTGAGGATGATAATTTTACACCAGATGGGGCAA
. : . : . : . : . : . :
JMFS021A06- ATATCCTACTCAAACATGTCAACCACAATGATACACTCATTGAGTTGAACAAGAAGGTGA
JMSF024H24- ATATCCTACTCAAACATGTCAACCACAATGATACACTCATTGAGTTGAACAAGAAGGTGA
rJMSF039I02+ CCTACTCAAACATGTCAACCACGATGATACACTCATTGAGTTGATCAAGAAGGTCA
____________________________________________________________
consensus ATATCCTACTCAAACATGTCAACCACAATGATACACTCATTGAGTTGAACAAGAAGGTGA
. : . : . : . : . : . :
JMFS021A06- CTGTTAATCCTCCCCTTCCTGCAAATCTTCTAACAAGCATCCATGCTGTGACTAATCTCT
JMSF024H24- CTGTTAATCCTCCCCTTCCTGCAAATCTTCTAACAAGCATCCATGCTGTGACTAATCTCT
rJMSF012H06+ TTCTAACAAGCATCCGTGCTGTGACTAATCTCT
rJMSF039I02+ CTGTTAATCCTCCCCTCCCTGCAAATCTTCTAACAAGCATCCGTGCTGTGACTAATCTCT
rJMSF011H06+ TCTAACAAGCATCCGTGCTGTGACTAATCTCT
rJMSF026M15+ T
rJMSF037K02+ GCATCCGTGCTGTGACTAATCTCT
rJMSF012H16+ CTAACAAGCATCCGTGCTGTGACTAATCTCT
____________________________________________________________
consensus CTGTTAATCCTCCCCTTCCTGCAAATCTTCTAACAAGCATCCGTGCTGTGACTAATCTCT
. : . : . : . : . : . :
JMFS021A06- TCAAGAATTCATTGTTTTATGAT
JMSF024H24- TCAAGAATTCATTGTTTTATGATTGGTTAATAAAACATCGTGGAGAG
rJMSF012H06+ TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
rJMSF039I02+ TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
rJMSF011H06+ TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
rJMSF042O14+ ACCGTGGAGAGATTCTAGATGCTT
rJMSF026M15+ TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
rJMSF037K02+ TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
rJMSF012H16+ TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
____________________________________________________________
consensus TCAAGAATTCGTTGTTTTATGATTGGTTAATAAAACACCGTGGAGAGATTCTAGATGCTT
. : . : . : . : . : . :
rJMSF012H06+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
rJMSF039I02+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
rJMSF011H06+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
rJMSF042O14+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
rJMSF026M15+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
rJMSF037K02+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
rJMSF012H16+ TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
____________________________________________________________
consensus TCTCAAGCTGTTATCTATCCTCAAATAAAAATGTACAACTTTCTTATTCGACACTGGTAC
. : . : . : . : . : . :
rJMSF012H06+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
rJMSF039I02+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
rJMSF011H06+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
rJMSF042O14+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
rJMSF026M15+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
rJMSF037K02+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
rJMSF012H16+ TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
____________________________________________________________
consensus TGAACTATGCTGTTCTTTTGATTGAAAAGAAGGATGAGGAAGGTCAATCTCAAGTTCTTT
. : . : . : . : . : . :
rJMSF012H06+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
rJMSF039I02+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
rJMSF011H06+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
rJMSF042O14+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
rJMSF026M15+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
rJMSF037K02+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
rJMSF012H16+ CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
____________________________________________________________
consensus CAGCAGCTCTTGAGATTGCAGAAGAGGGAAGTGTTGAAGCTGATTCAAAATTCCGAGTTC
. : . : . : . : . : . :
rJMSF012H06+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
rJMSF039I02+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
rJMSF011H06+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
rJMSF042O14+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
rJMSF026M15+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
rJMSF037K02+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
rJMSF012H16+ TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
____________________________________________________________
consensus TGGTTGCCCTAGGATCACTGATGCTTGATGGGGTTGTTAAAAGAATCGCATTAGACTTAG
. : . : . : . : . : . :
rJMSF012H06+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
rJMSF039I02+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
rJMSF011H06+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
rJMSF042O14+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
rJMSF026M15+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
rJMSF037K02+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
rJMSF012H16+ ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
____________________________________________________________
consensus ACGTAGAAAATATTGCAAAAGCAGCCAAGGCGGCTAAGGATCCAAAGCTGGCTGAAGTTG
. : . : . : . : . : . :
rJMSF012H06+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
rJMSF039I02+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
rJMSF011H06+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
rJMSF042O14+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
rJMSF026M15+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
rJMSF037K02+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
rJMSF012H16+ GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
____________________________________________________________
consensus GAGCTGACATTGAATTGATAATAAAGCAGACTTGAATTGAAAACTGACTGTTTCACTGCC
. : . : . : . : . : . :
rJMSF012H06+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
rJMSF039I02+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
rJMSF011H06+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
rJMSF042O14+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
rJMSF026M15+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
rJMSF037K02+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
rJMSF012H16+ ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
____________________________________________________________
consensus ACCTGTCACTGGAAACTGCAAAATCAATTCAATTCTTTGACCAATGCGGGGATAACGCCA
. : . : . : . : . : . :
rJMSF012H06+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
rJMSF039I02+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
rJMSF011H06+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
rJMSF042O14+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
rJMSF026M15+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
rJMSF037K02+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
rJMSF012H16+ AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
____________________________________________________________
consensus AGTGATTAAATGCTATCTCGGTGACTGCTGGCTAGATACAAAGAAGGCAACAACTACCCA
. : . : . : . : . : . :
rJMSF012H06+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
rJMSF039I02+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
rJMSF011H06+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAG----ATTGGGACACCAACG
rJMSF042O14+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
rJMSF026M15+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
rJMSF037K02+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
rJMSF012H16+ AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
____________________________________________________________
consensus AAGAAGCTTTTGGCATGAAAAGGAAACCTTACTATTTTGAGATTCATTGGGACACCAACG
. : . : . : . : . : . :
rJMSF012H06+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
rJMSF039I02+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
rJMSF011H06+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
rJMSF042O14+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
rJMSF026M15+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
rJMSF037K02+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
rJMSF012H16+ TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
____________________________________________________________
consensus TATCATTGATATGTCAAAACGTCTCTGAAGTGCTTTGTGGGTTGCTTTTCTATTTCCTGA
. : . : . : . : . : . :
rJMSF012H06+ AATTCT
rJMSF039I02+ AATTCTAC
rJMSF011H06+ AATTCTAC
rJMSF042O14+ AATTCTACTTGGATTTG
rJMSF026M15+ AATTCTACTTGGATTTGGTTCAATTACTGTTGCTAATACAGATCCTTTTCCTTC
rJMSF037K02+ AATTCTACTTGGATTTG
rJMSF012H16+ AATTCTACTTGGATTTGGTTCAATTACTGTTGCTAATACAGATCCTTTTCCTTCCAAATT
____________________________________________________________
consensus AATTCTACTTGGATTTGGTTCAATTACTGTTGCTAATACAGATCCTTTTCCTTCCAAATT