Contig 012542:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010L20Sequence309022056769012542 (2)gb|EYU37466.1|2e-66hypothetical protein MIMGU_mgv1a015035mg [Erythranthe guttata]
JMSF018L12Sequence546007891 (39)gb|EPS70351.1|4e-22hypothetical protein M569_04412, partial [Genlisea aurea]793012542 (2)ref|XP_009630736.1|8e-83PREDICTED: ankyrin repeat and protein kinase domain-containing protein 1-like [

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018L12+ GGGTTAAGATCATGCCTGNAGATCAGTTGGGTTTATACA
                      ____________________________________________________________
consensus GGGTTAAGATCATGCCTGNAGATCAGTTGGGTTTATACA
 
. : . : . : . : . : . :
rJMSF018L12+ AGCGGTCTAAAAGGTTGCATATGACCGCTGGAGATAGAGATGATCGTGGCTGGACTCCTC
rJMSF010L20+ AGGTTGCATATGACCGCTGGAGATAGAGATGATCGGGGCTGGACTCCTC
                      ____________________________________________________________
consensus AGCGGTCTAAAAGGTTGCATATGACCGCTGGAGATAGAGATGATCGTGGCTGGACTCCTC
 
. : . : . : . : . : . :
rJMSF018L12+ TACACA-TTGTTGCTCGGAAAGGTGACCTGAGAGAGGTTAGGCGACTTCTTAATGAAGGC
rJMSF010L20+ TACACATTTGTTGCTCGGAAAGGTGACCTGAGAGAGGTTAGGCGACTTCTTAATGAAGGC
                      ____________________________________________________________
consensus TACACATTTGTTGCTCGGAAAGGTGACCTGAGAGAGGTTAGGCGACTTCTTAATGAAGGC
 
. : . : . : . : . : . :
rJMSF018L12+ ATTGATCCAAATGTGGCTGCATGGGGCCCAAAAGCTCAGGGTGTCACACCCCTTCATCTT
rJMSF010L20+ ATTGATCCAAATGTGGCTGCATGGGGCCCAAAAGCTCAGGGTGTCACACCCCCTCATCTT
                      ____________________________________________________________
consensus ATTGATCCAAATGTGGCTGCATGGGGCCCAAAAGCTCAGGGTGTCACACCCCTTCATCTT
 
. : . : . : . : . : . :
rJMSF018L12+ GCTGCTAAGGGTGGCCACCGCAAAATTATGGATGAATTGCTTGAGCACGGTGCTGACATT
rJMSF010L20+ GCTGCTAAGGGTGGCCACCGCAAAATTATGGATGAATTGCTTGAGCACGGTGCTGACATT
                      ____________________________________________________________
consensus GCTGCTAAGGGTGGCCACCGCAAAATTATGGATGAATTGCTTGAGCACGGTGCTGACATT
 
. : . : . : . : . : . :
rJMSF018L12+ GATGCACGAACCAAGGGAGCTTGTGGTGGATGGACTCCTCTACATCATGCAGCTAAAGAA
rJMSF010L20+ GATGCACGAACCAAGGGAGCTTGTGGTGGATGGACTCCTCTACATCATGCAGCTAAAGAA
                      ____________________________________________________________
consensus GATGCACGAACCAAGGGAGCTTGTGGTGGATGGACTCCTCTACATCATGCAGCTAAAGAA
 
. : . : . : . : . : . :
rJMSF018L12+ AGAAAGAAGAAAGCAATCAAGTATCTGATTAAAAACGGTGCTTTTCTGCCAGATGACATC
rJMSF010L20+ AGAAAGAAGAAAGCAATCAAGTATCTGATTAAAAACGGTGCTTTTCTGCCAGATGACATC
                      ____________________________________________________________
consensus AGAAAGAAGAAAGCAATCAAGTATCTGATTAAAAACGGTGCTTTTCTGCCAGATGACATC
 
. : . : . : . : . : . :
rJMSF018L12+ AATGACACCAGGTTCAATCCACCCGTGCACTACTGTCCTGGTCTTGAGTGGGCTTATGAT
rJMSF010L20+ AATGACACCAGGTTCAATCCACCCGTGCACTACTGTCCTGGTCTTGAGTGGGCTTATGAT
                      ____________________________________________________________
consensus AATGACACCAGGTTCAATCCACCCGTGCACTACTGTCCTGGTCTTGAGTGGGCTTATGAT
 
. : . : . : . : . : . :
rJMSF018L12+ GAGATGAAGCGTCTTAAAGGGGACAGTTCATCATCTGGTGAGGGCTCCTATAGCTCTGGG
rJMSF010L20+ GAGATGAAGCGTCTTAAAGGGGACAGTTCATCATCTGGTGAGGGCTCCTATAGCTCTGGG
                      ____________________________________________________________
consensus GAGATGAAGCGTCTTAAAGGGGACAGTTCATCATCTGGTGAGGGCTCCTATAGCTCTGGG
 
. : . : . : . : . : . :
rJMSF018L12+ AATTGAGATAAGCGAATGTGTTGGAAGTCCAGTCCTATTTGGGATTCGGTTTATTCAATA
rJMSF010L20+ AATTGAGATAAGCGAATGTGTTGGAAGTCCAGTCCTATTTGGGATTCGGTTTATTCAATA
                      ____________________________________________________________
consensus AATTGAGATAAGCGAATGTGTTGGAAGTCCAGTCCTATTTGGGATTCGGTTTATTCAATA
 
. : . : . : . : . : . :
rJMSF018L12+ TTATGCACTGCGCCAATATTTCCAGTTGCCGTCATCCAGATCTATATGTTGCATTTGTTA
rJMSF010L20+ TTATGCACTGCGCCAATATTTCCAGTTGCCGTCATCCAGATCTATATGTTGCATTTGTTA
                      ____________________________________________________________
consensus TTATGCACTGCGCCAATATTTCCAGTTGCCGTCATCCAGATCTATATGTTGCATTTGTTA
 
. : . : . : . : . : . :
rJMSF018L12+ ATGCCTAGCGTTACATGTTGGATGTTGCTATTTCAATGGTTTTCTTTATGCTGTCCATTT
rJMSF010L20+ ATGCCTAGCGTTACATGTTGGATGTTGCTATTTCAATGGTTTTCTTTATGCTGTCCATTT
                      ____________________________________________________________
consensus ATGCCTAGCGTTACATGTTGGATGTTGCTATTTCAATGGTTTTCTTTATGCTGTCCATTT
 
. : . : . : . : . : . :
rJMSF018L12+ GCTTTGGAGGGTTGTTGTTCTAAACTCAGATGTCTTAGTATCTGGTGTATTGTATTTTTA
rJMSF010L20+ GCTTTGGAGGGTTGTTGTTCTAAACTCAGATGTCTTAGTATCTGGTGTATTGTATTTTTA
                      ____________________________________________________________
consensus GCTTTGGAGGGTTGTTGTTCTAAACTCAGATGTCTTAGTATCTGGTGTATTGTATTTTTA
 
. : . : . : . : . : . :
rJMSF018L12+ TCTTTATTTTGATGGTGACTGATATCAACATCTAC
rJMSF010L20+ TCTTTATTTTGATGGTGACTGATATCAACATCTACAAGACTACATTGTGGATCTTGAACA
                      ____________________________________________________________
consensus TCTTTATTTTGATGGTGACTGATATCAACATCTACAAGACTACATTGTGGATCTTGAACA