Contig 012521:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022G21Sequence523004956 (6)ref|XP_009782152.1|1e-57PREDICTED: protein decapping 5 isoform X2 [Nicotiana sylvestris]736012521 (3)ref|XP_010066758.1|2e-36PREDICTED: protein decapping 5 isoform X2 [Eucalyptus grandis] gb|KCW64786.1| hy
JMSF007G14Sequence414004956 (6)ref|XP_007222759.1|3e-41hypothetical protein PRUPE_ppa006535mg [Prunus persica] gb|EMJ23958.1| hypotheti742012521 (3)ref|XP_010066757.1|1e-16PREDICTED: protein decapping 5 isoform X1 [Eucalyptus grandis] gb|KCW64788.1| hy
JMSF026E18Sequence670004956 (6)ref|XP_002281060.1|5e-80PREDICTED: protein decapping 5 [Vitis vinifera] ref|XP_010648039.1| PREDICTED: p769012521 (3)emb|CDP00559.1|1e-40unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF026E18+ ACTCATGCACAAAGGCCAAATGGAGC
                      ____________________________________________________________
consensus ACTCATGCACAAAGGCCAAATGGAGC
 
. : . : . : . : . : . :
rJMSF026E18+ TCCATTTCAGATGCGCCACAACAACTACAGAGGGCGTGGAGGAAGAGGAACTGGGATTTC
                      ____________________________________________________________
consensus TCCATTTCAGATGCGCCACAACAACTACAGAGGGCGTGGAGGAAGAGGAACTGGGATTTC
 
. : . : . : . : . : . :
rJMSF026E18+ AAGACCAGTGACAAATTTTACGGAGGAGTTTGATTTTATGGCAATGAATGAGAAATTTAA
rJMFF022G21+ CCAGTGACAAATTTTACGGAGGAGTTTGATTTTATGGCAATGAATGAGAAATTTAA
                      ____________________________________________________________
consensus AAGACCAGTGACAAATTTTACGGAGGAGTTTGATTTTATGGCAATGAATGAGAAATTTAA
 
. : . : . : . : . : . :
rJMSF026E18+ CAAAGATGAAGTTTGGGGTCATCTTGGCAAGAGTTCTAAATCTGATTCAAGGGACAATGA
rJMFF022G21+ CAAAGATGAAGTTTGGGGTCATCTTGGCAAGAGTTCTAAGTCTGATTCAAGGGACAAAGA
rJMSF007G14+ TCTGATTCAAGGGACAAAGA
                      ____________________________________________________________
consensus CAAAGATGAAGTTTGGGGTCATCTTGGCAAGAGTTCTAAGTCTGATTCAAGGGACAAAGA
 
. : . : . : . : . : . :
rJMSF026E18+ AGGGAATGTAAATGGCAATGATGAAAATAATTATCACGAAGAAGAAGATGCTGGCCATCC
rJMFF022G21+ AGGGAATGTAAATGGCAATGATGAAAATAATTATTACGAACAAGAAGATGCTGGCCATCC
rJMSF007G14+ AGGGAATGTAAATGGCAATGATGAAAATAATTATTACGAACAAGAAGATGCTGGCCATCC
                      ____________________________________________________________
consensus AGGGAATGTAAATGGCAATGATGAAAATAATTATTACGAACAAGAAGATGCTGGCCATCC
 
. : . : . : . : . : . :
rJMSF026E18+ TAGGGTTGACGTCAAGCCTGTTTATAACAAGGATGACTTTTTTGATTCCTTGTCTTCTAA
rJMFF022G21+ TAGGGTTGAGGTCAAGCCAATTTATAACAAGGATGACTTTTTTGATTCCTTGTCTTCTAA
rJMSF007G14+ TAGGGTTGAGGTCAAGCCAATTTATAACAAGGATGACTTTTTTGATTCCTTGTCTTCTAA
                      ____________________________________________________________
consensus TAGGGTTGAGGTCAAGCCAATTTATAACAAGGATGACTTTTTTGATTCCTTGTCTTCTAA
 
. : . : . : . : . : . :
rJMSF026E18+ TGCATTGGATAATCAATCAAATCAAGTAAGGCCAAGGTTTTCTGAGCAGAGGAAGATTGA
rJMFF022G21+ TGCATTGGATAATCAATCAAATCAAGTAAGGCCAAGGTTTTCCGAGCAGAGGAAGATTGA
rJMSF007G14+ TGCATTGGATAATCAATCAAATCAAGTAAGGCCAAGGTTTTCCGAGCAGAGGAAGATTGA
                      ____________________________________________________________
consensus TGCATTGGATAATCAATCAAATCAAGTAAGGCCAAGGTTTTCCGAGCAGAGGAAGATTGA
 
. : . : . : . : . : . :
rJMSF026E18+ TGCCGAGACATTTGGAGGAGAGTACACAAGATATAGGGGTGGTCGTGGCCGTGGC-----
rJMFF022G21+ TGCCGAGACATTTGGAGGAGAGTACACAAGATATAGGGGTGGTCGTGGCCGTGGCCCTGG
rJMSF007G14+ TGCCGAGACATTTGGAGGAGAGTACACAAGATATAGGGGTGGTCGTGGCCGTGGCCCTGG
                      ____________________________________________________________
consensus TGCCGAGACATTTGGAGGAGAGTACACAAGATATAGGGGTGGTCGTGGCCGTGGCCCTGG
 
. : . : . : . : . : . :
rJMSF026E18+ -CCTTATCGTGGTGGCCGATCTCGAGGTTATTATGGAGGATATGGCGGAAGAGGATATGG
rJMFF022G21+ TCCTTATCGTGGTGGCCGATCTCGAGGTTATTATGGAGGATATGGCGGAAGAGGATATGG
rJMSF007G14+ TCCTTATCGTGGTGGCCGATCTCGAGGTTATTATGGAGGATATGGCGGAAGAGGATATGG
                      ____________________________________________________________
consensus TCCTTATCGTGGTGGCCGATCTCGAGGTTATTATGGAGGATATGGCGGAAGAGGATATGG
 
. : . : . : . : . : . :
rJMSF026E18+ CTATGGTGGTAGAGGCCGTGGTCGTGGGTCTTCCGACTAGAGTGCGTATATGTGGTATAT
rJMFF022G21+ CTATGGTGGTAGAGGCCGTGGTCGTGGCTCTTCCGACTAGAGTGCGTATATGTGGTATAT
rJMSF007G14+ CTATGGTGGTAGAGGCCGTGGTCGTGGCTCTTCCGACTAGAGTGCGTATATGTGGTATAT
                      ____________________________________________________________
consensus CTATGGTGGTAGAGGCCGTGGTCGTGGCTCTTCCGACTAGAGTGCGTATATGTGGTATAT
 
. : . : . : . : . : . :
rJMSF026E18+ TTGCATAAGTTTGTACGAGAGCAATGCTCGTGGTAAAAAGGTTTGGCTTAAAGCAATAGT
rJMFF022G21+ TTGCATAAGTTTGTACGAGAGCATTGTGCGTGGTAAAAAAGTTTGGCTTAAAGCAAAAGT
rJMSF007G14+ TTGCATAAGTTTGTACGAGAGCATTGTGCGTGGTAAAAAAGTTTGGCTTAAAGCAAAAGT
                      ____________________________________________________________
consensus TTGCATAAGTTTGTACGAGAGCATTGTGCGTGGTAAAAAAGTTTGGCTTAAAGCAAAAGT
 
. : . : . : . : . : . :
rJMSF026E18+ TGTGTTCTTCTCCCATGAGGATTTGCAATGTTTAGAGTATTTCCATTGTTGTTTTTGCAT
rJMFF022G21+ TGTGTTCTTCTCCCTTGAGGATTGGCAATGTTTAGAGTATTTCCATTGTTGTTTTTGCAT
rJMSF007G14+ TGTGTTCTTCTCCCTTGAGGATTGGCAATGTTTAGAGTATTTCCATTGTTGTTTTTGCAT
                      ____________________________________________________________
consensus TGTGTTCTTCTCCCTTGAGGATTGGCAATGTTTAGAGTATTTCCATTGTTGTTTTTGCAT
 
. : . : . : . : . : . :
rJMSF026E18+ TTTAG-TTTTCTGTAATCTGAGGAATAAAACTAGGTTGTAGGGAGGATGGTCGGGATACG
rJMFF022G21+ TTTAGTTTTTCTGTAATCTGAGGAATAAAACTAGGTTGTAGGGAGGATGGTTGGGATCCG
rJMSF007G14+ TTTAGTTTTTCTGTAATCTGAGGAATAAAACTAGGTTGTAGGGAGGATGGTTGGGATCCG
                      ____________________________________________________________
consensus TTTAGTTTTTCTGTAATCTGAGGAATAAAACTAGGTTGTAGGGAGGATGGTTGGGATCCG
 
. : . : . : . : . : . :
rJMSF026E18+ TGGTTCC
rJMFF022G21+ TGGTTCCATATTTTCGTTTCTCTTCTTTCCCTCAATGAAGCTTTCATCAAGCGATTGGTC
rJMSF007G14+ TGGTTCCATATTTTCGTTTCTCTTCTTTCCCTCAATGAAGCTTTCATCAAGCGATTGGTC
                      ____________________________________________________________
consensus TGGTTCCATATTTTCGTTTCTCTTCTTTCCCTCAATGAAGCTTTCATCAAGCGATTGGTC
 
. : . : . : . : . : . :
rJMFF022G21+ ATATCATATGACTCATTTAT
rJMSF007G14+ ATATCATATGACTCATTTATTGTCCTAGAGGCATACGCCCATACCAACCTCTGATCAAGT
                      ____________________________________________________________
consensus ATATCATATGACTCATTTATTGTCCTAGAGGCATACGCCCATACCAACCTCTGATCAAGT
 
. : . : . : . : . : . :
rJMSF007G14+ CAATTAGATATTCAGATCAATATCAAATATTTAATCATACATTAGTATTATATTCAACAT
                      ____________________________________________________________
consensus CAATTAGATATTCAGATCAATATCAAATATTTAATCATACATTAGTATTATATTCAACAT