Contig 012517:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008J14Sequence596012517 (4)ref|XP_009782686.1|212PREDICTED: uncharacterized protein LOC104231395 [Nicotiana sylvestris]624012517 (4)ref|XP_006353858.1|210PREDICTED: uncharacterized protein LOC102598192 [Solanum tuberosum]
JMSF007C23Sequence372012517 (4)ref|XP_009782686.1|75.9PREDICTED: uncharacterized protein LOC104231395 [Nicotiana sylvestris]685012517 (4)ref|XP_009782686.1|242PREDICTED: uncharacterized protein LOC104231395 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF007C23- GAAAAGTCCAAACATACCCAATCCTCTCCCCCT
                      ____________________________________________________________
consensus GAAAAGTCCAAACATACCCAATCCTCTCCCCCT
 
. : . : . : . : . : . :
JMSF007C23- TCTAAAAATCCCAACAAAGCCTTTCCCTTATCTTCTTCTTCTCCATTCTACACACTCCAC
JMFF008J14- ATTCTACACACTCCAC
                      ____________________________________________________________
consensus TCTAAAAATCCCAACAAAGCCTTTCCCTTATCTTCTTCTTCTCCATTCTACACACTCCAC
 
. : . : . : . : . : . :
JMSF007C23- TGCACTGAGAGAACCCATCAGGCCATCAATGAATTCCCACTGTTCCTCAGATGAGGCGCT
JMFF008J14- TGCACTGAGAGAACCCATCAGGCCATCAATGAATTCCCACTGTTCCTCAGATGAGGCGCT
                      ____________________________________________________________
consensus TGCACTGAGAGAACCCATCAGGCCATCAATGAATTCCCACTGTTCCTCAGATGAGGCGCT
 
. : . : . : . : . : . :
JMSF007C23- GCAAGAAAGGCAAAAACCAGTGCAGTCAAATTGCCTCATCTCTCTACCATTCTACGCGCC
JMFF008J14- GCAAGAAAGGCAAAAACCAGTGCAGTCAAATTGCCTCATCTCTCTACCATTCTACGCGCC
                      ____________________________________________________________
consensus GCAAGAAAGGCAAAAACCAGTGCAGTCAAATTGCCTCATCTCTCTACCATTCTACGCGCC
 
. : . : . : . : . : . :
JMSF007C23- GCCATTGTTTCACCCTTCATTCTTCAGACACCACTCAAAGCCAAACCTCCAGTTGCTAAG
JMFF008J14- GCCATTGTTTCACCCTTCATTCTTCAGACACCACTCAAAGCCAAACCTCCAGTTGCTAAG
                      ____________________________________________________________
consensus GCCATTGTTTCACCCTTCATTCTTCAGACACCACTCAAAGCCAAACCTCCAGTTGCTAAG
 
. : . : . : . : . : . :
JMSF007C23- AATGGCGGAGGATTCATCGCGTGCTGTTCGCCGGTTCCACAGCTCCGTCGTCTCCGCCGC
JMFF008J14- AATGGCGGAGGATTCATCGCGTGCTGTTCGCCGGTTCCACAGCTCCGTCGTCTCCGCCGC
                      ____________________________________________________________
consensus AATGGCGGAGGATTCATCGCGTGCTGTTCGCCGGTTCCACAGCTCCGTCGTCTCCGCCGC
 
. : . : . : . : . : . :
JMSF007C23- CGACAACTGCCTCAAGTCTCTGCATTCTCTACTTTCCCA
JMFF008J14- CGACAACTGCCTCAAGTCTCTGCATTCTCTACTTTCCCAGAATCCATTTTTCAAAAACCT
rJMSF007C23+ TACTTTCCCAGAATCCATTTTTCAAAAACCT
                      ____________________________________________________________
consensus CGACAACTGCCTCAAGTCTCTGCATTCTCTACTTTCCCAGAATCCATTTTTCAAAAACCT
 
. : . : . : . : . : . :
JMFF008J14- GCTTTCTTTATCTTCTCATCTCCAAGATATCCGCCAGTTCCAGATTGAACGCAGAGCTCG
rJMFF008J14+ C------CAGATTGAACGCAGAGCTCG
rJMSF007C23+ GCTTTCTTTATNTTCTCATCTCCAAGATATCCGC------CAGATTGAACGCAGAGCTCG
                      ____________________________________________________________
consensus GCTTTCTTTATCTTCTCATCTCCAAGATATCCGC------CAGATTGAACGCAGAGCTCG
 
. : . : . : . : . : . :
JMFF008J14- CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
rJMFF008J14+ CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
rJMSF007C23+ CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
                      ____________________________________________________________
consensus CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
 
. : . : . : . : . : . :
JMFF008J14- GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
rJMFF008J14+ GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
rJMSF007C23+ GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
                      ____________________________________________________________
consensus GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
 
. : . : . : . : . : . :
JMFF008J14- CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
rJMFF008J14+ CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
rJMSF007C23+ CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
                      ____________________________________________________________
consensus CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
 
. : . : . : . : . : . :
JMFF008J14- CAGCACCTTGTGTGATCCGTATTTGAATATA
rJMFF008J14+ CAGCACCTTGTGTGATCCGTATTTGAATATATTCCGTGGCATTATCCCACCACTTGGAGG
rJMSF007C23+ CAGCACCTTGTGTGATCCGTATTTGAATATATTCCGTGGCATTATCCCACCACTTGGAGG
                      ____________________________________________________________
consensus CAGCACCTTGTGTGATCCGTATTTGAATATATTCCGTGGCATTATCCCACCACTTGGAGG
 
. : . : . : . : . : . :
rJMFF008J14+ GACTNTGGATCTTTCACCCATACTGGCATTTCTCGTGTTAAATGCCTTTACGAGCACAGC
rJMSF007C23+ GACTCTGGATNTTTCACCCATACTGGCATTTCTCGTGTTAAATGCCTTTACGAGCACAGN
                      ____________________________________________________________
consensus GACTCTGGATCTTTCACCCATACTGGCATTTCTCGTGTTAAATGCCTTTACGAGCACAGC
 
. : . : . : . : . : . :
rJMFF008J14+ TTNTGCACTTCCCGCTGAGCTCCCACCACCTACAGGCGTGTCTCGGGATGATNTGCCTCA
rJMSF007C23+ TTTTGCACTTCCCGCTGAGCTCCCACCACCTACAGGCGTGTCTCGGGATGATNTGCCTCA
                      ____________________________________________________________
consensus TTTTGCACTTCCCGCTGAGCTCCCACCACCTACAGGCGTGTCTCGGGATGATNTGCCTCA
 
. : . : . : . : . : . :
rJMFF008J14+ TACAATGGAGCCTNGTNTTACCATGTCACAGAGGAAATGGATGAGACGGCGTAGTGCTGG
rJMSF007C23+ TACAATGGAGCCTNGTCTTACCATGTCACAGAGGAAATGGATGAGACGGCGTAGTGCTGG
                      ____________________________________________________________
consensus TACAATGGAGCCTNGTCTTACCATGTCACAGAGGAAATGGATGAGACGGCGTAGTGCTGG
 
. : . : . : . : . : . :
rJMFF008J14+ AAACAGGCCGAAGTCTGCTGGTGGTAACAAATAAGTTACCATCTCCTGTTTATTTGTATG
rJMSF007C23+ AAACAGGCCGAAGTNTGCTGGTGGTAACAAATAAGTTACCATCTCCNGTTTATTTGTATG
                      ____________________________________________________________
consensus AAACAGGCCGAAGTCTGCTGGTGGTAACAAATAAGTTACCATCTCCTGTTTATTTGTATG
 
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rJMFF008J14+ TAATTCATACCGTCTTAGGATTGAATGTGTCATACGATGATGTCCTCGTTCAGTAAT-CG
rJMSF007C23+ TAATTCATACCGTNTTAGGATTGAATGTGTCATACGATGATGTCCTCGTTCAGTAATGCG
                      ____________________________________________________________
consensus TAATTCATACCGTCTTAGGATTGAATGTGTCATACGATGATGTCCTCGTTCAGTAATGCG
 
. : . : . : . : . : . :
rJMFF008J14+ TGGTAAACATCTCGAAACTGTTCTCAGTTTTGATACTAAACAAGGCGTAAA
rJMSF007C23+ TGGTAAACATCTCGAAACTGTTCTCAGTTTTGATACTAAACAAGGCGTAAATTCACAATT
                      ____________________________________________________________
consensus TGGTAAACATCTCGAAACTGTTCTCAGTTTTGATACTAAACAAGGCGTAAATTCACAATT