Contig 012495:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001I23Sequence230012495 (4)ref|XP_006367355.1|2e-25PREDICTED: cytochrome b5 isoform A-like [Solanum tuberosum]717012495 (4)gb|AJO70762.1|2e-82cytochrome b5 [Catharanthus roseus]
JMSF009N07Sequence222012495 (4)ref|XP_006350625.1|1e-22PREDICTED: metal-nicotianamine transporter YSL2-like [Solanum tuberosum]634012495 (4)gb|AJO70762.1|3e-82cytochrome b5 [Catharanthus roseus]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009N07+ GGAGTTTAAGAGAATCCACAACTCT
                      ____________________________________________________________
consensus GGAGTTTAAGAGAATCCACAACTCT
 
. : . : . : . : . : . :
JMSF001I23- A
JMSF009N07- A
rJMSF009N07+ GAGTTTTAGTGAGTGAATCCAGAGAACTTTCTCTCTCTAACGCAGATTGCAGCAAGAAGA
rJMSF001I23+ TTTTAGTGAGTGAATCCAGAGAACTTTCTCTCTCTAACGCAGATTGCAGCAAGAAGA
                      ____________________________________________________________
consensus GAGTTTTAGTGAGTGAATCCAGAGAACTTTCTCTCTCTAACGCAGATTGCAGCAAGAAGA
 
. : . : . : . : . : . :
JMSF001I23- TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
JMSF009N07- TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
rJMSF009N07+ TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
rJMSF001I23+ TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
                      ____________________________________________________________
consensus TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
 
. : . : . : . : . : . :
JMSF001I23- ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
JMSF009N07- ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
rJMSF009N07+ ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
rJMSF001I23+ ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
                      ____________________________________________________________
consensus ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
 
. : . : . : . : . : . :
JMSF001I23- CTGGAGGTGATGAAGTCCTGCTTTCAGC
JMSF009N07- CTGGAGGTGATGAAGTC
rJMSF009N07+ CTGGAGGTGATGAAGTCCTGCTTTCAGCTACAGGGAAGGATGGAACAAATGATTTTGAGG
rJMSF001I23+ CTGGAGGTGATGAAGTCCTGCTTTCAGCTACAGGGAAGGATGGAACAAATGATTTTGAGG
                      ____________________________________________________________
consensus CTGGAGGTGATGAAGTCCTGCTTTCAGCTACAGGGAAGGATGGAACAAATGATTTTGAGG
 
. : . : . : . : . : . :
rJMSF009N07+ ATGTTGGGCATAGCGATACTGCTAGAGAAATGATGGATCAATATTACATTGGAGAGATTG
rJMSF001I23+ ATGTTGGGCATAGCGATACTGCTAGAGAAATGATGGATCAATATTACATTGGAGAGATTG
                      ____________________________________________________________
consensus ATGTTGGGCATAGCGATACTGCTAGAGAAATGATGGATCAATATTACATTGGAGAGATTG
 
. : . : . : . : . : . :
rJMSF009N07+ ACATGTCTACAGTCCCATTAAAACGCACTTATATTCCACCACAACAGACCCCATACAATG
rJMSF001I23+ ACATGTCTACAGTCCCATTAAAACGCACTTATATTCCACCACAACAGACCCCATACAATG
                      ____________________________________________________________
consensus ACATGTCTACAGTCCCATTAAAACGCACTTATATTCCACCACAACAGACCCCATACAATG
 
. : . : . : . : . : . :
rJMSF009N07+ CCGACAAGGCCCCAGATTTTGTGATCAAGATTTTGCAGTTCCTTGTACCTCTATTGATCT
rJMSF001I23+ CCGACAAGGCCCCAGATTTTGTGATCAAGATTTTGCAGTTCCTTGTACCTCTATTGATCT
                      ____________________________________________________________
consensus CCGACAAGGCCCCAGATTTTGTGATCAAGATTTTGCAGTTCCTTGTACCTCTATTGATCT
 
. : . : . : . : . : . :
rJMSF009N07+ TGGGCTTGGCCTTTGCTGTTCGACACTACACCAAGGAGAAGTAGTGGATTCAATTCGTAT
rJMSF001I23+ TGGGCTTGGCCTTTGCTGTTCGACACTACACCAAGGAGAAGTAGTGGATTCAATTCGTAT
                      ____________________________________________________________
consensus TGGGCTTGGCCTTTGCTGTTCGACACTACACCAAGGAGAAGTAGTGGATTCAATTCGTAT
 
. : . : . : . : . : . :
rJMSF009N07+ CAGGCAGTTGTCTTTAATACTTTATGTTAATTGTTTAATGAGTACTTATTTCCCCTTTTT
rJMSF001I23+ CAGGCAGTTGTCTTTAATACTTTATGTTAATTGTTTAATGAGTACTTATTTCCCCTTTTT
                      ____________________________________________________________
consensus CAGGCAGTTGTCTTTAATACTTTATGTTAATTGTTTAATGAGTACTTATTTCCCCTTTTT
 
. : . : . : . : . : . :
rJMSF009N07+ GAGTCGCATTGTATGCAACATGAACTACCATGGTATCTGATCCTGTTATTGGATGAGACC
rJMSF001I23+ GAGTCGCATTGTATGCAACATGAACTACCATGGTATCTGATCCTGTTATTGGATGAGACC
                      ____________________________________________________________
consensus GAGTCGCATTGTATGCAACATGAACTACCATGGTATCTGATCCTGTTATTGGATGAGACC
 
. : . : . : . : . : . :
rJMSF009N07+ TCTCATTCT
rJMSF001I23+ TCTCATTCTCTTGTGATTCCTTATGTTCACCACCTTTGGGCATTAGTTGCTTTAGAAAGA
                      ____________________________________________________________
consensus TCTCATTCTCTTGTGATTCCTTATGTTCACCACCTTTGGGCATTAGTTGCTTTAGAAAGA
 
. : . : . : . : . : . :
rJMSF001I23+ GATGGATGCAGAAGTGCAGTGAGTTATTATTGATAACCAGTTTTAGATAATCGTTTTGTG
                      ____________________________________________________________
consensus GATGGATGCAGAAGTGCAGTGAGTTATTATTGATAACCAGTTTTAGATAATCGTTTTGTG