Contig 012475:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007I10Sequence541009157 (3)ref|XP_011070210.1|2e-51PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Sesamum indicum]744012475 (3)ref|XP_002517267.1|1e-68nitrate transporter, putative [Ricinus communis] gb|EEF45060.1| nitrate transpor
JMFF049P15Sequence620009157 (3)ref|XP_002517267.1|1e-48nitrate transporter, putative [Ricinus communis] gb|EEF45060.1| nitrate transpor506012475 (3)ref|XP_010055631.1|2e-17PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Eucalyptus grandis] gb|KCW90002.1|
JMSF001J23Sequence202009157 (3)797012475 (3)ref|XP_002517267.1|3e-73nitrate transporter, putative [Ricinus communis] gb|EEF45060.1| nitrate transpor

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF001J23+ TTCGCAGATTC
                      ____________________________________________________________
consensus TTCGCAGATTC
 
. : . : . : . : . : . :
rJMSF001J23+ ACTGGAAATCCTGCAGGCATTACATGCCTACAGAGAATGGTATAGGGGTTGCAGTTAACA
                      ____________________________________________________________
consensus ACTGGAAATCCTGCAGGCATTACATGCCTACAGAGAATGGTATAGGGGTTGCAGTTAACA
 
. : . : . : . : . : . :
rJMSF001J23+ TCCTTGCCACCATTGTGTCAGCTCTCANTGAGATCAAGCGAAAAGCAGTTGCTGAACGTT
rJMFF007I10+ CCATTGTGTCAGCTCTCATTGAGATCAAGCGAAAAGCAGTTGCTGAACGTT
                      ____________________________________________________________
consensus TCCTTGCCACCATTGTGTCAGCTCTCATTGAGATCAAGCGAAAAGCAGTTGCTGAACGTT
 
. : . : . : . : . : . :
rJMSF001J23+ ATAACCTACTTGATGAACCCGCTGCCATCATACCTATTAGTGTGTTCTGGTTAATTCCCC
rJMFF007I10+ ATAACCTACTTGATGAACCCGCTGCCATCATACCTATTAGTGTGTTCTGGTTAATTCCCC
                      ____________________________________________________________
consensus ATAACCTACTTGATGAACCCGCTGCCATCATACCTATTAGTGTGTTCTGGTTAATTCCCC
 
. : . : . : . : . : . :
rJMSF001J23+ AGTATTGCCTCCATGGAATAGCTGAAGTTTTCATGTCAGTTGGGCACCTTGAGTTTCTCA
rJMFF007I10+ AGTATTGCCTCCATGGAATAGCTGAAGTTTTCATGTCAGTTGGGCACCTTGAGTTTCTCA
                      ____________________________________________________________
consensus AGTATTGCCTCCATGGAATAGCTGAAGTTTTCATGTCAGTTGGGCACCTTGAGTTTCTCA
 
. : . : . : . : . : . :
rJMSF001J23+ TTGAGCAATCCCCAGAAAGCATGAGAAGCACTGCAGCTGCGCTGAACTCATTAACTTCTT
rJMFF007I10+ TTGAGCAATCCCCAGAAAGCATGAGAAGCACTGCAGCTGCGCTGAACTCATTAACTTCTT
                      ____________________________________________________________
consensus TTGAGCAATCCCCAGAAAGCATGAGAAGCACTGCAGCTGCGCTGAACTCATTAACTTCTT
 
. : . : . : . : . : . :
rJMSF001J23+ CAATCGGAAGTTACATGGGCACCCTTGTGGTATCTTTAGTGCACAGCTATACCGGCAGGG
rJMFF007I10+ CAATCGGAAGTTACATGGGCACCCTTGTGGTATCTTTAGTGCACAGCTATACCGGCAGGG
                      ____________________________________________________________
consensus CAATCGGAAGTTACATGGGCACCCTTGTGGTATCTTTAGTGCACAGCTATACCGGCAGGG
 
. : . : . : . : . : . :
rJMSF001J23+ GCCAAGAAGGGAACTGGCTACCAGACCGGAATCTGAATAGGGGAAAGTTGGAAAACTACT
rJMFF007I10+ GCCAAGAAGGGAACTGGCTACCAGACCGGAATCTGAATAGGGGAAAGTTGGAAAACTACT
rJMFF049P15+ GAATAGGGGAAAGTTGGAAAACTACT
                      ____________________________________________________________
consensus GCCAAGAAGGGAACTGGCTACCAGACCGGAATCTGAATAGGGGAAAGTTGGAAAACTACT
 
. : . : . : . : . : . :
rJMSF001J23+ ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
rJMFF007I10+ ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
rJMFF049P15+ ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
                      ____________________________________________________________
consensus ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
 
. : . : . : . : . : . :
rJMSF001J23+ TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
rJMFF007I10+ TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
rJMFF049P15+ TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
                      ____________________________________________________________
consensus TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
 
. : . : . : . : . : . :
rJMSF001J23+ CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
rJMFF007I10+ CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
rJMFF049P15+ CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
                      ____________________________________________________________
consensus CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
 
. : . : . : . : . : . :
rJMSF001J23+ AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
rJMFF007I10+ AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
rJMFF049P15+ AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
                      ____________________________________________________________
consensus AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
 
. : . : . : . : . : . :
rJMSF001J23+ GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
rJMFF007I10+ GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
rJMFF049P15+ GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
                      ____________________________________________________________
consensus GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
 
. : . : . : . : . : . :
rJMSF001J23+ TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
rJMFF007I10+ TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
rJMFF049P15+ TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
                      ____________________________________________________________
consensus TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
 
. : . : . : . : . : . :
rJMSF001J23+ TGACTA
rJMFF007I10+ TGACTATTATAGTATTATTATGGAGTAATAGAA
rJMFF049P15+ TGACTATTATAGTATTATTATGGAGTAATAGAATGATAATCTTCTCCTTTTATATATCTC
                      ____________________________________________________________
consensus TGACTATTATAGTATTATTATGGAGTAATAGAATGATAATCTTCTCCTTTTATATATCTC
 
. : . : . : . : . : . :
rJMFF049P15+ CAGTTTTATTGACCTCAGCTTTGTTATAACAGAGGCAATTGGATTCTTTCTGGTTCCTTT
                      ____________________________________________________________
consensus CAGTTTTATTGACCTCAGCTTTGTTATAACAGAGGCAATTGGATTCTTTCTGGTTCCTTT