| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF039M19 | Sequence | 739 | 012474 (5) | gb|ABI34273.1| | 5e-40 | Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] | |||||
| JMFF049P05 | Sequence | 609 | 003548 (3) | gb|AHW50673.1| | 2e-31 | serine/threonine-protein kinase [Nicotiana tabacum] | 554 | 012474 (5) | ref|XP_002511480.1| | 2e-08 | ribosomal protein S6 kinase, putative [Ricinus communis] gb|EEF52082.1| ribosoma |
| JMSF006J06 | Sequence | 319 | 003548 (3) | 579 | 012474 (5) | gb|ABI34273.1| | 4e-31 | Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] | |||
| JMSF028J19 | Sequence | 672 | 012474 (5) | gb|KJB18767.1| | 2e-139 | hypothetical protein B456_003G071400 [Gossypium raimondii] | 793 | 012474 (5) | gb|ABI34273.1| | 3e-36 | Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF028J19- GGGCTTTTGGGAAGTGTTTCAG
____________________________________________________________
consensus GGGCTTTTGGGAAGTGTTTCAG
. : . : . : . : . : . :
JMSF028J19- GTGAGAATGAAGGGGCGGAGTTCAACAGAGGACGATGGGATTTTCGCCATGAAAGTGATG
____________________________________________________________
consensus GTGAGAATGAAGGGGCGGAGTTCAACAGAGGACGATGGGATTTTCGCCATGAAAGTGATG
. : . : . : . : . : . :
JMSF028J19- AGAAAAGATACGATTATCAAGAATAATCATGTGGATTACATGAGGGCCGAGAGAGATATT
____________________________________________________________
consensus AGAAAAGATACGATTATCAAGAATAATCATGTGGATTACATGAGGGCCGAGAGAGATATT
. : . : . : . : . : . :
JMSF028J19- CTCACCAAAGTTGTTCACCCTTTCATTGTTCAGCTTAGATACTCCTTTCAGACAAAGTCA
____________________________________________________________
consensus CTCACCAAAGTTGTTCACCCTTTCATTGTTCAGCTTAGATACTCCTTTCAGACAAAGTCA
. : . : . : . : . : . :
JMSF028J19- AAGCTGTACCTGATCTTGGATTTTATCAATGGAGGCCATCTGTTTTATCATCTATATAGA
____________________________________________________________
consensus AAGCTGTACCTGATCTTGGATTTTATCAATGGAGGCCATCTGTTTTATCATCTATATAGA
. : . : . : . : . : . :
JMSF028J19- CAAGGGATATTCACTGAGGAGCAGGCGAGGGTTTATACTGCTGAGATAGTGTCTGCTGTA
____________________________________________________________
consensus CAAGGGATATTCACTGAGGAGCAGGCGAGGGTTTATACTGCTGAGATAGTGTCTGCTGTA
. : . : . : . : . : . :
JMSF028J19- TCACATCTTCACCAGAAAGGGATTGTGCACCGAGACCTCAAACCCGAAAATATTCTCACG
____________________________________________________________
consensus TCACATCTTCACCAGAAAGGGATTGTGCACCGAGACCTCAAACCCGAAAATATTCTCACG
. : . : . : . : . : . :
JMSF028J19- GATGCTGATGGGCATGTCATGCTAACTGATTTTGGACTGGCTAAGGAGATCGATGAATCA
____________________________________________________________
consensus GATGCTGATGGGCATGTCATGCTAACTGATTTTGGACTGGCTAAGGAGATCGATGAATCA
. : . : . : . : . : . :
JMSF028J19- AGTAGATCGAATTCAATGTGTGGAACAACAGAATACATGGCTCCCGAGATTTTATTATCC
____________________________________________________________
consensus AGTAGATCGAATTCAATGTGTGGAACAACAGAATACATGGCTCCCGAGATTTTATTATCC
. : . : . : . : . : . :
JMSF028J19- AAAGGACACAACAAAGATGCTGATTGGTGGAGCGTTGGGATACTTTTATATGAGATGCTG
rJMSF028J19+ TATGAGATGCTG
____________________________________________________________
consensus AAAGGACACAACAAAGATGCTGATTGGTGGAGCGTTGGGATACTTTTATATGAGATGCTG
. : . : . : . : . : . :
JMSF028J19- ACCGGTCAGCCTCCATTCACACATTCCAACCGAAAGAAGCTTCAGGACAAGATCATCAAG
rJMSF028J19+ ACCGGTCAGCCTCCATTCACACATTCCAACCGAAAGAAGCTTCAGGACAAGATCATCAAG
____________________________________________________________
consensus ACCGGTCAGCCTCCATTCACACATTCCAACCGAAAGAAGCTTCAGGACAAGATCATCAAG
. : . : . : . : . : . :
JMSF028J19- GAGAAAATTAAACTCCCGCCACGTCTGACCAGCGAAGCCCGCTCTTTGCT
rJMSF028J19+ GAGAAAATTAAACTCCCGCCACGTCTGACCAGCGAAGCCCGCTCTTTGCTCAAAGGAGTA
____________________________________________________________
consensus GAGAAAATTAAACTCCCGCCACGTCTGACCAGCGAAGCCCGCTCTTTGCTCAAAGGAGTA
. : . : . : . : . : . :
rJMSF028J19+ TGTTTCTTACGTTTTTTCTGAATTCTGTACAGTAACTCAGTGGCTCAGCAGACAGGGCCT
____________________________________________________________
consensus TGTTTCTTACGTTTTTTCTGAATTCTGTACAGTAACTCAGTGGCTCAGCAGACAGGGCCT
. : . : . : . : . : . :
rJMSF028J19+ GTCTTTCGAACTTTGGTCAAATACTGGCTATTAAACCAGCGAGCGCTAAATTCCATTTTC
____________________________________________________________
consensus GTCTTTCGAACTTTGGTCAAATACTGGCTATTAAACCAGCGAGCGCTAAATTCCATTTTC
. : . : . : . : . : . :
rJMSF028J19+ TTATGTTAATTTGTTGTTGTTGTTTCATTAGTTGTTACAAAAGGACCCATCTACAAGGCT
rJMFF039M19+ TTGTTACAAAAGGACCCATCTACAAGGCT
____________________________________________________________
consensus TTATGTTAATTTGTTGTTGTTGTTTCATTAGTTGTTACAAAAGGACCCATCTACAAGGCT
. : . : . : . : . : . :
rJMSF028J19+ AGGCAGCGGGGCTAGAGGAGGCGATGAGATCAAAAGTCACAAATGGTTTCGATCAATCAA
rJMSF006J06+ GGGGCTAGAGGAGGCGATGAGATCAAAAGTCACAAATGGTTTCGATCAATCAA
rJMFF039M19+ AGGCAGCGGGGCTAGAGGAGGCGATGAGATCAAAAGTCACAAATGGTTTCGATCAATCAA
____________________________________________________________
consensus AGGCAGCGGGGCTAGAGGAGGCGATGAGATCAAAAGTCACAAATGGTTTCGATCAATCAA
. : . : . : . : . : . :
rJMSF028J19+ TTGGAAGAAAATCGAAGGCAGAGAATTGCGGCCAACGTTCAAGCCAGATGTGAGTAGCAG
rJMSF006J06+ TTGGAAGAAAATCGAAGGCAGAGAATTGCGGCCAACGTTCAAGCCAGATGTGAGTAGCAG
rJMFF039M19+ TTGGAAGAAAATCGAAGGCAGAGAATTGCGGCCAACGTTCAAGCCAGATGTGAGTAGCAG
____________________________________________________________
consensus TTGGAAGAAAATCGAAGGCAGAGAATTGCGGCCAACGTTCAAGCCAGATGTGAGTAGCAG
. : . : . : . : . : . :
rJMSF028J19+ TGAGTGCACAGCGAATTTCGATAAATGTTGGACTACAATGCCACCGGATGACTCACCGGC
rJMSF006J06+ TGAGTGCACAGCGAATTTCGATAAATGTTGGACTACAATGCCACCGGATGACTCACCGGC
rJMFF039M19+ TGAGTGCACAGCGAATTTCGATAAATGTTGGACTACAATGCCACCGGATGACTCACCGGC
rJMFF049P05+ GGATGACTCACCGGC
____________________________________________________________
consensus TGAGTGCACAGCGAATTTCGATAAATGTTGGACTACAATGCCACCGGATGACTCACCGGC
. : . : . : . : . : . :
rJMSF028J19+ TGCTACACCAACTGCAGGAGAACACTTCCAAGGTTACACTTATGTTGCACCTAACCCTTG
rJMSF006J06+ TGCTACACCAACTGCAGGAGAACACTTCCAAGGTTACACTTATGTTGCACCTAACCCTTG
rJMFF039M19+ TGCTACACCAACTGCAGGAGAACACTTCCAAGGTTACACTTATGTTGCACCTAACCCTTG
rJMFF049P05+ TGCTACACCAACTGCAGGAGAACACTTCCAAGGTTACACTTATGTTGCACCTAACCCTTG
____________________________________________________________
consensus TGCTACACCAACTGCAGGAGAACACTTCCAAGGTTACACTTATGTTGCACCTAACCCTTG
. : . : . : . : . : . :
rJMSF028J19+ GCTCTCTTCTATCAATGAATGAGTTTGTATTCTCATCAAACATTCTTGTATTTCAACAAA
rJMSF006J06+ GCTCTCTTCTATCAATGAATGAGTTTGTATTCTCATCAAACATTCTTGTATTTCAACAAA
rJMFF039M19+ GCTCTCTTCTATCAATGAATGAGTTTGTATTCTCATCAAACATTCTTGTATTTCAACAAA
rJMFF049P05+ GCTCTCTTCTATCAATGAATGAGTTTGTATTCTCATCAAACATTCTTGTATTTCAACAAA
____________________________________________________________
consensus GCTCTCTTCTATCAATGAATGAGTTTGTATTCTCATCAAACATTCTTGTATTTCAACAAA
. : . : . : . : . : . :
rJMSF028J19+ ACGTCAAGGGATCGATCTCTGACTTTGGGTATGAAACAACCTGAAATCTCCAAGCCATCT
rJMSF006J06+ ACGTCAAGGGATCGATCTCTGACTTTGGGTATGAAACAACCTGAAATCTCCAAGCCATCT
rJMFF039M19+ ACGTCAAGGGATCGATCTCTGACTTTGGGTATGAAACAACCTGAAATCTCCAAGCCATCT
rJMFF049P05+ ACGTCAAGGGATCGATCTCTGACTTTGGGTATGAAACAACCTGAAATCTCCAAGCCATCT
____________________________________________________________
consensus ACGTCAAGGGATCGATCTCTGACTTTGGGTATGAAACAACCTGAAATCTCCAAGCCATCT
. : . : . : . : . : . :
rJMSF028J19+ GTCTCACCCTTATCCGTCTATGGATACCCAGGGTAACACCAAAAAAATTCTTGTATTCAA
rJMSF006J06+ GTCTCACCCTTATCCGTCTATGAATACCCAGGGTAACACCAAAAAAATTCTTGTATTCAA
rJMFF039M19+ GTCTCACCCTTATCCGTCTATGAATACCCAGGGTAACACCAAAAAAATTCTTGTATTCAA
rJMFF049P05+ GTCTCACCCTTATCCGTCTATGAATACCCAGGGTAACACCAAAAAAATTCTTGTATTCAA
____________________________________________________________
consensus GTCTCACCCTTATCCGTCTATGAATACCCAGGGTAACACCAAAAAAATTCTTGTATTCAA
. : . : . : . : . : . :
rJMSF028J19+ CCTACATTTGTATGTAGGTTCATTCAATTGTTGAANCAGGTGTGCAAATATGTGTCCCAA
rJMSF006J06+ CCTACATTTGTATGTAGGTTCATTCAATTGTTGAA-CAGGTGTGCAAATATGTGTCCCAA
rJMFF039M19+ CCTACATTTGTATGTAGGTTCATTCAATTGTTGAA-CAGGTGTGCAAATATGTGTCCCAA
rJMFF049P05+ CCTACATTTGTATGTAGGTTCATTCAATTGTTGAA-CAGGTGTGCAAATATGTGTCCCAA
____________________________________________________________
consensus CCTACATTTGTATGTAGGTTCATTCAATTGTTGAA-CAGGTGTGCAAATATGTGTCCCAA
. : . : . : . : . : . :
rJMSF028J19+ A
rJMSF006J06+ ATACAACTCATATAGTTTTTATTACATGTCAAACTTAACCATCGTTACAGTTGTGTCTGG
rJMFF039M19+ ATACAACTCATATAGTTTTTATTACATGTCAAACTTAACCATCGTTACAGTTGTGTCTGG
rJMFF049P05+ ATACAACTCATATAGTTTTTATTACATGTCAAACTTAACCATCGTTACAGTTGTGTCTGG
____________________________________________________________
consensus ATACAACTCATATAGTTTTTATTACATGTCAAACTTAACCATCGTTACAGTTGTGTCTGG
. : . : . : . : . : . :
rJMSF006J06+ ATTATACTTTCAAATAATGTATATTCAGTATACAAATAA
rJMFF039M19+ ATTATACTTTCAAATAATGTATATTCAGCATACAAATAATGTACTTTTAATATATTAAAA
rJMFF049P05+ ATTATACTTTCAAATAATGTATATTCAGCATACAAATAATGTACTTTTAATATATTAAAA
____________________________________________________________
consensus ATTATACTTTCAAATAATGTATATTCAGCATACAAATAATGTACTTTTAATATATTAAAA
. : . : . : . : . : . :
rJMFF039M19+ ATGTACATTGTATTCATGAAAAGTTCATTATTTGAGTATTGAAAGTATATTATTTTGAAT
rJMFF049P05+ ATGTACATTGTATTCATGAAAAGTTCATTATTTGAGTATTGAAAGTATATTATTTTGAAT
____________________________________________________________
consensus ATGTACATTGTATTCATGAAAAGTTCATTATTTGAGTATTGAAAGTATATTATTTTGAAT
. : . : . : . : . : . :
rJMFF039M19+ AATGTACATTTATGACAAGAATAATGTACTTTTAGTATAT
rJMFF049P05+ AATGTACATTTATGACAAGAATAATGTACTTTTAGTATATTGAGTACACAATAATTTGCC
____________________________________________________________
consensus AATGTACATTTATGACAAGAATAATGTACTTTTAGTATATTGAGTACACAATAATTTGCC