| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005D10 | Sequence | 502 | 007428 (7) | ref|XP_009339426.1| | 8e-05 | PREDICTED: amino acid permease 3-like [Pyrus x bretschneideri] ref|XP_009339427. | 720 | 012473 (8) | ref|XP_010322323.1| | 1e-82 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF017F02 | Sequence | 533 | 007428 (7) | ref|XP_009801366.1| | 1e-10 | PREDICTED: amino acid permease 3-like [Nicotiana sylvestris] | 690 | 012473 (8) | ref|XP_010322323.1| | 5e-80 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF023L09 | Sequence | 516 | 012473 (8) | ref|XP_009379863.1| | 3e-39 | PREDICTED: amino acid permease 4-like [Musa acuminata subsp. malaccensis] | |||||
| JMFF031M21 | Sequence | 545 | 007428 (7) | ref|XP_009609434.1| | 1e-13 | PREDICTED: amino acid permease 3-like [Nicotiana tomentosiformis] | 654 | 012473 (8) | ref|XP_010322323.1| | 9e-61 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF031O18 | Sequence | 542 | 007428 (7) | ref|XP_009609434.1| | 1e-13 | PREDICTED: amino acid permease 3-like [Nicotiana tomentosiformis] | 716 | 012473 (8) | ref|XP_010322323.1| | 6e-77 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] |
| JMFF034P16 | Sequence | 453 | 007428 (7) | 217 | 012473 (8) | ||||||
| JMFF039K07 | Sequence | 478 | 007428 (7) | 617 | 012473 (8) | ref|XP_010322323.1| | 1e-74 | PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum] | |||
| JMFF049J17 | Sequence | 635 | 007428 (7) | ref|XP_009801366.1| | 4e-32 | PREDICTED: amino acid permease 3-like [Nicotiana sylvestris] | 581 | 012473 (8) | ref|XP_009379863.1| | 3e-43 | PREDICTED: amino acid permease 4-like [Musa acuminata subsp. malaccensis] |
This contig is upended
. : . : . : . : . : . :
rJMFF031O18+ AGCTCCCCC
____________________________________________________________
consensus AGCTCCCCC
. : . : . : . : . : . :
rJMFF017F02+ GCTTCGGATTNTACAACCCCTTNTGGCTTCTCGACATCGCCAAN
rJMFF031O18+ GGCAACCTCCTAACCGGCTTCGGATTCTACAACCCCTTCTGGCTTCTCGACATCGCCAA-
____________________________________________________________
consensus GGCAACCTCCTAACCGGCTTCGGATTCTACAACCCCTTCTGGCTTCTCGACATCGCCAAN
. : . : . : . : . : . :
rJMFF039K07+ GCCTACCAGGTCTACTGCCAGCCCCTCTTCGC
rJMFF017F02+ CGCCGCCATCGTCATCCACCTCGTCGGCGCCTACCAGGTCTACTGCCAGCCCCTCTTCGC
rJMFF031O18+ CGCCGCCATCGTCATCCACCTCGTCGGCGCCTACCAGGTCTACTGCCAGCCCCTCTTCGC
rJMFF005D10+ CGCCGCCATCGTCATCCACCTCGTCGGCGCCTACCAGGTCTACTGCCAGCCCCTCTTCGC
____________________________________________________________
consensus CGCCGCCATCGTCATCCACCTCGTCGGCGCCTACCAGGTCTACTGCCAGCCCCTCTTCGC
. : . : . : . : . : . :
rJMFF039K07+ CTTCGTCGAGAAAACCGCCAAAGACCGATTCCCAGATTCCAAGCTCATAACCAGAGACCT
rJMFF017F02+ CTTCGTCGAGAAAACCGCCAAAGACCGATTCCCAGATTCCAAGCTCATAACCAGAGACCT
rJMFF031O18+ CTTCGTCGAGAAAACCGCCAAAGACCGATTCCCAGATTCCAAGCTCATAACCAGAGACCT
rJMFF005D10+ CTTCGTCGAGAAAACCGCCAAAGACCGATTCCCAGATTCCAAGCTCATAACCAGAGACCT
rJMFF031M21+ CGATTCCCAGATTCCAAGCTCATAACCAGAGACCT
____________________________________________________________
consensus CTTCGTCGAGAAAACCGCCAAAGACCGATTCCCAGATTCCAAGCTCATAACCAGAGACCT
. : . : . : . : . : . :
rJMFF039K07+ CCAAAT-CCCCCTCTTCCCCGGCGGCAAGCCTTTCAAGCTCAACCTCTTCCGCCTCGTAT
rJMFF017F02+ CCAAAT-CCCCCTCTTCCCCGGCGGCAAGCCTTTCAAGCTCAACCTCTTCCGCCTCGTAT
rJMFF031O18+ CCAAATCCCCCCTCTTCCCCGGCGGCAAGCCTTTCAAGCTCAACCTCTTCCGCCTCGTAT
rJMFF005D10+ CCAAAT-CCCCCTCTTCCCCGGCGGCAAGCCTTTCAAGCTCAACCTCTTCCGCCTCGTAT
rJMFF031M21+ CCAAAT-CCCCCTCTTCCCCGGCGGCAAGCCTTTCAAGCTCAACCTCTTCCGCCTCGTAT
____________________________________________________________
consensus CCAAAT-CCCCCTCTTCCCCGGCGGCAAGCCTTTCAAGCTCAACCTCTTCCGCCTCGTAT
. : . : . : . : . : . :
rJMFF039K07+ GGCGCTCCGTCTTCGTGGTCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
rJMFF017F02+ GGCGCTCCGTCTTCGTGGTCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
rJMFF031O18+ GGCGCTCCGTCTTCGTGGTCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
rJMFF005D10+ GGCGCTCCGTCTTCGTGGTCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
rJMFF023L09+ TCCATGNTCCTCCCCTTCTTCAACG
rJMFF031M21+ GGCGCTCCGTCTTCGTGGTCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
rJMFF049J17+ TCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
____________________________________________________________
consensus GGCGCTCCGTCTTCGTGGTCATCACCACCGTCATCTCCATGCTCCTCCCCTTCTTCAACG
. : . : . : . : . : . :
rJMFF039K07+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
rJMFF017F02+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
rJMFF031O18+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
rJMFF005D10+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
rJMFF023L09+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTNTGGCCTCTCACCGTTTACTTCCCCGTCG
rJMFF031M21+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
rJMFF049J17+ ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
____________________________________________________________
consensus ACATCGTGGGCATCCTCGGCGCCCTCGGCTTCTGGCCTCTCACCGTTTACTTCCCCGTCG
. : . : . : . : . : . :
rJMFF039K07+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
rJMFF017F02+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
rJMFF031O18+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
rJMFF005D10+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
rJMFF023L09+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTNTGCTTCCAAG
rJMFF031M21+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
rJMFF049J17+ AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
____________________________________________________________
consensus AAATGTATATAGTTCAGAAACAGATACCCAAATGGAGCACCAAATGGGTCTGCTTCCAAG
. : . : . : . : . : . :
rJMFF039K07+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
rJMFF017F02+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
rJMFF031O18+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
rJMFF005D10+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
rJMFF023L09+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
rJMFF031M21+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
rJMFF049J17+ TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
____________________________________________________________
consensus TCCTCAGCGCCGCCTGCCTTGTCATCTCCATTGCCGCCGCCGTCGGGTCCTTCGCCGGAG
. : . : . : . : . : . :
rJMFF039K07+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
rJMFF017F02+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
rJMFF031O18+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
rJMFF005D10+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
rJMFF034P16+ CTAATTGTTGAGATGTT
rJMFF023L09+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
rJMFF031M21+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
rJMFF049J17+ TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
____________________________________________________________
consensus TTGTCACTGATCTTAAGGTTTACAGGCCATTCAAGACCAGCTACTAATTGTTGAGATGTT
. : . : . : . : . : . :
rJMFF039K07+ CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF017F02+ CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF031O18+ CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF005D10+ CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF034P16+ CATAAGGATCGATCGGAACAAAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF023L09+ CATAAGGATCGATCGGAACAAAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF031M21+ CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
rJMFF049J17+ CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
____________________________________________________________
consensus CATAAGGATCGATCGGAAC-AAAAAAAAGATGCCAATTAAAATTAAGAAGAGCTAGCTAG
. : . : . : . : . : . :
rJMFF039K07+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
rJMFF017F02+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
rJMFF031O18+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
rJMFF005D10+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
rJMFF034P16+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGNTTATATGTTTTCATATC
rJMFF023L09+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
rJMFF031M21+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
rJMFF049J17+ GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
____________________________________________________________
consensus GCATGCAGTTCTGTCGTCTGATCTGTAGTGATGATAGTTTAGTTTATATGTTTTCATATC
. : . : . : . : . : . :
rJMFF039K07+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGA
rJMFF017F02+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAA
rJMFF031O18+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAA
rJMFF005D10+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAATGTCTGATGATC
rJMFF034P16+ GTGTCTTGNGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAATGTNTGATGATC
rJMFF023L09+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAATGTCTGATGATC
rJMFF031M21+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAATGTCTGATGATC
rJMFF049J17+ GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAATGTCTGATGATC
____________________________________________________________
consensus GTGTCTTGTGAGTTGTGATGATGCCAAATTAAAGATAAGATATCAGAATGTCTGATGATC
. : . : . : . : . : . :
rJMFF005D10+ CTCAAATCTTGTCCACTTAGAATCTCATGTTTTAGAAAATCCAAACCAAA
rJMFF034P16+ CTCAAATCTTGTCCACTTAG
rJMFF023L09+ CTCAAATCTTGTCCACTTAGAATCTCATGTTTTAGAAAATCCAAACCAAAACTTT
rJMFF031M21+ CTCAAATCTTGTCCACTTAGAATCTCATGTTTTAGAAAATCCAAACCAAAACTTTTCCCC
rJMFF049J17+ CTCAAATCTTGTCCACTTAGAATCTCATGTTTTAGAAAATCCAAACCAAAACTTTTCCCC
____________________________________________________________
consensus CTCAAATCTTGTCCACTTAGAATCTCATGTTTTAGAAAATCCAAACCAAAACTTTTCCCC
. : . : . : . : . : . :
rJMFF031M21+ AAGCAATGCAAATAATATAT
rJMFF049J17+ AAGCAATGCAAATAATATATTAACTCCCTCTCTCAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AAGCAATGCAAATAATATATTAACTCCCTCTCTCAAAAAAAAAAAAAAACTCTCCAGGGT