Contig 012462:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019G16Sequence105012462 (9)ref|XP_010100865.1|2e-09Heparanase-like protein 3 [Morus notabilis] gb|EXB85444.1| Heparanase-like prote
JMFF024B15Sequence506013251 (9)ref|XP_009757548.1|5e-74PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris]718012462 (9)ref|XP_006359499.1|1e-50PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]
JMFF027N13Sequence415013251 (9)ref|XP_009757548.1|1e-50PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris]676012462 (9)ref|XP_006359499.1|8e-51PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]
JMFF048D22Sequence412013251 (9)ref|XP_009757548.1|8e-43PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris]346012462 (9)ref|XP_009409980.1|9e-05PREDICTED: heparanase-like protein 3 [Musa acuminata subsp. malaccensis]
JMSF008J17Sequence384013251 (9)741012462 (9)ref|XP_006359499.1|3e-85PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]
JMSF009C03Sequence319013251 (9)751012462 (9)ref|XP_006359499.1|2e-87PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]
JMSF016P07Sequence415013251 (9)773012462 (9)ref|XP_006359499.1|6e-85PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]
JMSF036E03Sequence675013251 (9)ref|XP_009757548.1|5e-78PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris]707012462 (9)ref|XP_006359499.1|7e-71PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]
JMSF045L01Sequence759013251 (9)ref|XP_009757548.1|8e-98PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris]847012462 (9)ref|XP_006359499.1|3e-82PREDICTED: heparanase-like protein 3-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF045L01+                                        GTGGCCGCAATCATGTCACCAATGCCTTTT
                      ____________________________________________________________
consensus                                           GTGGCCGCAATCATGTCACCAATGCCTTTT
 
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rJMSF009C03+                                           ATGTCAGCCTCGTACGATAC-AAAAAC
rJMSF008J17+                                                                AAAAAC
rJMSF045L01+          GTTTTTAGCTTNTGGTATCTTGACCAGCTTGGGATGTCAGCCTCGTACGATACAAAAAAC
rJMSF016P07+                                                                AAAAAC
                      ____________________________________________________________
consensus             GTTTTTAGCTTNTGGTATCTTGACCAGCTTGGGATGTCAGCCTCGTACGATACAAAAAAC
 
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rJMSF009C03+          ATACTGCCGGCAGACACTAATTGGAGGAAACTACGGTTTACTTAACACTACTACCTTTGT
rJMSF008J17+          ATACTGCCGGCAGACACTAATTGGAGGAAACTACGGTTTACTTAACACTACTACCTTTGT
rJMSF045L01+          ATACTGCCGGCAGACACTAATTGGAGGAAACTACGGTTTACTTAACACTACTACCTTTGT
rJMSF016P07+          ATACTGCCGGCAGACACTAATTGGAGGAAACTACGGTTTACTTAACACTACTACCTTTGT
rJMSF036E03+                                             GTTTACTTAACACTACTACCTTTGT
                      ____________________________________________________________
consensus             ATACTGCCGGCAGACACTAATTGGAGGAAACTACGGTTTACTTAACACTACTACCTTTGT
 
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rJMSF009C03+          ACCAAATCCAGATTACTACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAATGCTCT
rJMSF008J17+          ACCAAATCCAGATTACTACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAATGCTCT
rJMSF045L01+          ACCAAATCCAGATTACTACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAATGCTCT
rJMFF019G16+           CCAAATCCAGATTNNTNCAGTGCTNTTCTTTGGCNCCGATTAATGGGAAGGAATGCTNT
rJMSF016P07+          ACCAAATCCAGATTACTACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAATGCTCT
rJMSF036E03+          ACCAAATCCAGATTACTACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAATGCTCT
rJMFF027N13+                                                            GGAATGCTCT
rJMFF024B15+                                                        GGAAGGAATGCTNT
                      ____________________________________________________________
consensus             ACCAAATCCAGATTACTACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAATGCTCT
 
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rJMSF009C03+          GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
rJMSF008J17+          GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
rJMSF045L01+          GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
rJMFF019G16+          GTCAACAAGCTTNTCGGGGACGAAGAAAATACGTGCNTACGCTCAT              
rJMSF016P07+          GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
rJMSF036E03+          GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
rJMFF027N13+          GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
rJMFF024B15+          GTCAACAAGCTTNTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
                      ____________________________________________________________
consensus             GTCAACAAGCTTCTCGGGGACGAAGAAAATACGTGCCTACGCTCATTGTGCAAAGCAATC
 
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rJMSF009C03+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
rJMSF008J17+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
rJMSF045L01+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
rJMSF016P07+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
rJMSF036E03+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
rJMFF027N13+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
rJMFF024B15+          TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
                      ____________________________________________________________
consensus             TGGAGGCATCACCTTATTGTTGATCAATCTAGACAGCAACACTACCGTGGAGGCCAATGT
 
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rJMSF009C03+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
rJMSF008J17+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
rJMSF045L01+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
rJMSF016P07+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
rJMSF036E03+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
rJMFF027N13+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
rJMFF024B15+          TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
                      ____________________________________________________________
consensus             TGCATACAATGGAAGCTTTGTGCACCATAGAAAACATATACGTCATATAAACCATCACCA
 
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rJMSF009C03+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
rJMSF008J17+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
rJMSF045L01+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
rJMSF016P07+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
rJMSF036E03+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
rJMFF027N13+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
rJMFF024B15+          CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
                      ____________________________________________________________
consensus             CCACCACCATCATAGCCATAGCCATGGAAAGGGATCACCGCGGAGCCAAAAGAGAGGTAC
 
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rJMSF009C03+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
rJMSF008J17+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
rJMSF045L01+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
rJMSF016P07+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
rJMSF036E03+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
rJMFF027N13+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
rJMFF024B15+          AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
                      ____________________________________________________________
consensus             AATGACAAGAGAAGAGTATCATTTGACAGCAAAGGGCGGAGATTTGCACAGCCAAACAAT
 
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rJMSF009C03+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
rJMSF008J17+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
rJMSF045L01+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
rJMSF016P07+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
rJMSF036E03+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
rJMFF027N13+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
rJMFF024B15+          GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
                      ____________________________________________________________
consensus             GCTGCTAAATGGGAATGAATTGAGTGTAGATTCATCGGGGAGCATACCGGAGATGAAGCC
 
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rJMSF009C03+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMSF008J17+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMSF045L01+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMSF016P07+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMSF036E03+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMFF027N13+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMFF024B15+          GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
rJMFF048D22+                            TGAGCCAATAACTGTGGCTCCTTTTTCCATGGTATTTGCTCA
                      ____________________________________________________________
consensus             GCGATATTTGAACTCATCTGAGCCAATAACTGTGGCTCCTTTTTCCATTGTATTTGCTCA
 
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rJMSF009C03+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMSF008J17+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMSF045L01+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMSF016P07+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMSF036E03+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMFF027N13+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMFF024B15+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
rJMFF048D22+          CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
                      ____________________________________________________________
consensus             CATACCTTATGTCTTCCTGCCTGCTTGCAGATAGTGATAGTGATAGTGATGATATGATGG
 
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rJMSF009C03+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMSF008J17+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMSF045L01+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMSF016P07+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMSF036E03+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMFF027N13+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMFF024B15+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
rJMFF048D22+          GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
                      ____________________________________________________________
consensus             GGCCAAAACTGGTTCCCCATTTGGTGATTCTTGAAATAAGAAACAGAATGGAGAATATGA
 
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rJMSF009C03+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
rJMSF008J17+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
rJMSF045L01+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
rJMSF016P07+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
rJMSF036E03+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
rJMFF027N13+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
rJMFF024B15+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACGCAATGGGGTTTGGATTCCACTAATG
rJMFF048D22+          TTGTTTATTCTTTCATTCTTCATAGATGTTATACGCAATGGGGTTTGGATTCCACTAATG
                      ____________________________________________________________
consensus             TTGTTTATTCTTTCATTCTTCATAGATGTTATACACAATGGGGTTTGGATTCCACTAATG
 
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rJMSF009C03+          CCATC                                                       
rJMSF008J17+          CCAT                                                        
rJMSF045L01+          CCATCATGGATGTTATATGGC                                       
rJMSF016P07+          CCATCATGGATGTTATATGGC                                       
rJMSF036E03+          CCATCATGGATGTTATATGGCA                                      
rJMFF027N13+          CCATCATGGATGTTATATGGCATTGTGATAATGTGATCAATGTTAATCAATCA       
rJMFF024B15+          CCATCATGGATGTTATATGGCATTGTGATAATGTGATCAATGTTAATCAATCATGTTGAG
rJMFF048D22+          CCATCATGGATGTTATATGGCATTGTGATAATGTGATCAATGTTAATCAATCATGTTGAG
                      ____________________________________________________________
consensus             CCATCATGGATGTTATATGGCATTGTGATAATGTGATCAATGTTAATCAATCATGTTGAG
 
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rJMFF024B15+          CTTTGAAGGCATTTCATCCAAGCCATTAGTCTACTAAATCAATA                
rJMFF048D22+          CTTTGAAGGCATTTCATCCAAGCCATTAGTGTACTAAATCAATATATATAGCTGTCCATA
                      ____________________________________________________________
consensus             CTTTGAAGGCATTTCATCCAAGCCATTAGTGTACTAAATCAATATATATAGCTGTCCATA