Contig 012459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A10Sequence569012459 (10)ref|XP_009613603.1|6e-80PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]646012459 (10)ref|XP_009613603.1|6e-78PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]
JMFF016P18Sequence611012459 (10)ref|XP_009613603.1|8e-80PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]648012459 (10)ref|XP_009613603.1|1e-77PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]
JMFF047K14Sequence464012459 (10)ref|XP_009613603.1|1e-80PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]363012459 (10)gb|KJB10498.1|1e-08hypothetical protein B456_001G204400 [Gossypium raimondii]
JMFN018I21Sequence597012459 (10)ref|XP_009613603.1|1e-79PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]
JMSF030I11Sequence404013310 (7)ref|XP_011074054.1|2e-68PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alp664012459 (10)ref|XP_009613603.1|4e-79PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]
JMSF040K18Sequence640012459 (10)ref|XP_009613603.1|3e-79PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]729012459 (10)ref|XP_009613603.1|8e-79PREDICTED: microsomal glutathione S-transferase 3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF040K18-                                                 GGAGCTATACTTTCCTAATGGC
rJMSF040K18+                                                GGAGCTATACTTTCCTAATGGC
                      ____________________________________________________________
consensus                                                   GGAGCTATACTTTCCTAATGGC
 
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JMSF040K18-           ATCTAGTTATCCAAACCCAAACAATCCACAGCTACCCTCCTAATCTAGAAGAATAAGCAT
rJMSF040K18+          ATCTAGTTATCCAAACCCAAACAATCCACAGCTACCCTCCTAATCTAGAAGAATAAGCAT
rJMSF030I11+                                                       TAGAAGAATAAGCAT
                      ____________________________________________________________
consensus             ATCTAGTTATCCAAACCCAAACAATCCACAGCTACCCTCCTAATCTAGAAGAATAAGCAT
 
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JMSF040K18-           ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFF001A10-                                  AGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFF047K14-                      AAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
rJMSF040K18+          ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFF016P18-                      AAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
JMFN018I21-                                         AAACCGCCATGG-CCGGAGTGGAGATACTG
rJMFF001A10+                                                     CCGGAGTGGAGATACTG
rJMSF030I11+          ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
rJMFF016P18+                     AAAATCAAACCCAGAAAGAAAACCGCCATGGCCCGGAGTGGAGATACTG
                      ____________________________________________________________
consensus             ACAGAATCATCAAAATCAAACCCAGAAAGAAAACCGCCATGG-CCGGAGTGGAGATACTG
 
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JMSF040K18-           CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFF001A10-           CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFF047K14-           CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMSF040K18+          CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFF016P18-           CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
JMFN018I21-           CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMFF001A10+          CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMSF030I11+          CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
rJMFF016P18+          CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
                      ____________________________________________________________
consensus             CCCAAAGAGTATGGATACGTGGTCATCGTTCTCGTCCTCTACTGTTTCCTCAACCTCTGG
 
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JMSF040K18-           ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFF001A10-           ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFF047K14-           ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMSF040K18+          ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFF016P18-           ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
JMFN018I21-           ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMFF001A10+          ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMSF030I11+          ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
rJMFF016P18+          ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
                      ____________________________________________________________
consensus             ATGGGTTTCCAAGTTGGCACAGCTCGCAAGAAGTATAAGGTTCCCTATCCTACCATGTAT
 
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JMSF040K18-           GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFF001A10-           GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFF047K14-           GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMSF040K18+          GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFF016P18-           GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
JMFN018I21-           GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMFF001A10+          GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMSF030I11+          GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
rJMFF016P18+          GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
                      ____________________________________________________________
consensus             GCAATAGAAGCTGAAAACAAGGATGCTAAGCTCTTCAACTGCGTTCAGAGAGGACATCAG
 
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JMSF040K18-           AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFF001A10-           AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFF047K14-           AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMSF040K18+          AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFF016P18-           AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
JMFN018I21-           AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMFF001A10+          AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMSF030I11+          AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
rJMFF016P18+          AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
                      ____________________________________________________________
consensus             AATTCACTGGAAAATATGCCTGTATTTTTCATGCTGATGATATTGGGAGGAATTAGGCAC
 
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JMSF040K18-           CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFF001A10-           CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFF047K14-           CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMSF040K18+          CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFF016P18-           CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
JMFN018I21-           CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMFF001A10+          CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMSF030I11+          CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMFF016P18+          CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
rJMFF047K14+                                                                  CACT
                      ____________________________________________________________
consensus             CCTTTGATTTCTGCATCCTTAGGAGCCATATACATTGTTTCTCGGTATGGCTATTTCACT
 
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JMSF040K18-           GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFF001A10-           GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFF047K14-           GGTTATGCCACTGGTGATCCTACNAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMSF040K18+          GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFF016P18-           GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
JMFN018I21-           GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMFF001A10+          GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMSF030I11+          GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMFF016P18+          GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
rJMFF047K14+          GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
                      ____________________________________________________________
consensus             GGTTATGCCACTGGTGATCCTACAAAGCGCTATACTCTTGGGAAATATGGTTTCATTGCA
 
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JMSF040K18-           ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFF001A10-           ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFF047K14-           ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATG    
rJMSF040K18+          ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFF016P18-           ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
JMFN018I21-           ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMFF001A10+          ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMSF030I11+          ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMFF016P18+          ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
rJMFF047K14+          ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
                      ____________________________________________________________
consensus             ATTTTTGGTCTTCAGATTTGTGCAATATCCTGTGCAATTAAGCTTCTAACATCATGAACT
 
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JMSF040K18-           AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
JMFF001A10-           AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMSF040K18+          AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
JMFF016P18-           AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
JMFN018I21-           AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMFF001A10+          AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMSF030I11+          AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMFF016P18+          AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
rJMFF047K14+          AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
                      ____________________________________________________________
consensus             AGAAGATGCTGCTTGGTAGTTGTCTCTTATATTTGCCTAGACAAATCCATTGTTTTTGGA
 
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JMSF040K18-           ATATAGTTCTCTGCGTAAT                                         
JMFF001A10-           ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTA        
rJMSF040K18+          ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAANCGAGG
JMFF016P18-           ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGANG
JMFN018I21-           ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMFF001A10+          ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMSF030I11+          ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMFF016P18+          ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
rJMFF047K14+          ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
                      ____________________________________________________________
consensus             ATATAGTTCTCTGCGTAATAGTTGTGCTGTGGTTATGTTATTTTAACCTTTAAA-CGAGG
 
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rJMSF040K18+          CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTT            
JMFF016P18-           CGCTGCCTTAACTGTTGTCATGTA                                    
JMFN018I21-           CGCTGCCTTAACTGTTGTCATGTAGAAAC                               
rJMFF001A10+          CTCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATG                
rJMSF030I11+          CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTT            
rJMFF016P18+          CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTTTGTTTTTGGATA
rJMFF047K14+          CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTTTGTTTTTGGATA
                      ____________________________________________________________
consensus             CGCTGCCTTAACTGTTGTCATGTAGAAACTTTGCCAACCATATGGTTTTGTTTTTGGATA
 
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rJMFF047K14+          TGACTGCAATAAAATGTATTAATGTTTGCATACAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TGACTGCAATAAAATGTATTAATGTTTGCATACAAAAAAAAAAAAAAAACTCTCCAGGGT