Contig 012455:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014M14Sequence568023697ref|XP_009760074.1|5e-79PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Nicotiana sylvestris]674012455 (2)ref|XP_002267438.1|2e-96PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
JMFF046L10Sequence518022780ref|XP_009760074.1|9e-75PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Nicotiana sylvestris]459012455 (2)emb|CAN82979.1|4e-55hypothetical protein VITISV_023329 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF014M14+ GAA
                      ____________________________________________________________
consensus GAA
 
. : . : . : . : . : . :
rJMFF014M14+ TCTCGAGCTTTCGCAGTAATGCTTCTAAAATCAATCCTCAAAGTCGCGGAGCCATTGCAG
                      ____________________________________________________________
consensus TCTCGAGCTTTCGCAGTAATGCTTCTAAAATCAATCCTCAAAGTCGCGGAGCCATTGCAG
 
. : . : . : . : . : . :
rJMFF014M14+ CTGACAGGCTTGAAGCCTGCATTCTATCTCGCAACAGTGCAAATCCTGAAAGACTCCATA
                      ____________________________________________________________
consensus CTGACAGGCTTGAAGCCTGCATTCTATCTCGCAACAGTGCAAATCCTGAAAGACTCCATA
 
. : . : . : . : . : . :
rJMFF014M14+ TCCGAGAAGGCCTCGAAAGCCGCACTGCACATTCTAATCAACGTTGCTCCATGGGCGAGG
                      ____________________________________________________________
consensus TCCGAGAAGGCCTCGAAAGCCGCACTGCACATTCTAATCAACGTTGCTCCATGGGCGAGG
 
. : . : . : . : . : . :
rJMFF014M14+ AACAGAATCAAAGCAGTAGAGGCCGGAGCCACGGCGGTGTTGATCGATCTCCTTATCGAA
                      ____________________________________________________________
consensus AACAGAATCAAAGCAGTAGAGGCCGGAGCCACGGCGGTGTTGATCGATCTCCTTATCGAA
 
. : . : . : . : . : . :
rJMFF014M14+ TCGACGGAGAAGAGGACATGTGAAATGATCCTAACGTCCCTGGATCAGCTCTGCCAGTGC
rJMFF046L10+ GAAATGATCCTAACGTCCCTGGATCAGCTCTGCCAGTGC
                      ____________________________________________________________
consensus TCGACGGAGAAGAGGACATGTGAAATGATCCTAACGTCCCTGGATCAGCTCTGCCAGTGC
 
. : . : . : . : . : . :
rJMFF014M14+ GCGGAAGGGAGGGCGGAGCTGCTAAGCCATCCCGCCGGGCTCGCCGTCGTGTCCAAGAAA
rJMFF046L10+ GCGGAAGGGAGGGCGGAGCTGCTAAGCCATCCCGCCGGGCTCGCCGTCGTGTCCAAGAAA
                      ____________________________________________________________
consensus GCGGAAGGGAGGGCGGAGCTGCTAAGCCATCCCGCCGGGCTCGCCGTCGTGTCCAAGAAA
 
. : . : . : . : . : . :
rJMFF014M14+ ATCTTTAGGGTTTCGCATGCGGCCAGCGACAGAGCCGTCAAGATTCTGTACTCCATTTCT
rJMFF046L10+ ATCTTTAGGGTTTCGCATGCGGCCAGCGACAGAGCCGTCAAGATTCTGTACTCCATTTCT
                      ____________________________________________________________
consensus ATCTTTAGGGTTTCGCATGCGGCCAGCGACAGAGCCGTCAAGATTCTGTACTCCATTTCT
 
. : . : . : . : . : . :
rJMFF014M14+ AGGTTTTCGGCGACGGCGGCGGTTGTTCGTGAGATGTTGCAGTTGGGCGTGGCGGCGAAG
rJMFF046L10+ AGGTTTTCGGCGACGGCGGCGGTTGTTCGTGAGATGTTGCAGTTGGGCGTGGCGGCGAAG
                      ____________________________________________________________
consensus AGGTTTTCGGCGACGGCGGCGGTTGTTCGTGAGATGTTGCAGTTGGGCGTGGCGGCGAAG
 
. : . : . : . : . : . :
rJMFF014M14+ CTGTGCCTAGTGACGCAAGTTGATTGTGGGAGCAAGACGAAGGAGAGGGCCATGGGAATT
rJMFF046L10+ CTGTGCCTAGTGACGCAAGTTGATTGTGGGAGCAAGACGAAGGAGAGGGCCATGGGAATT
                      ____________________________________________________________
consensus CTGTGCCTAGTGACGCAAGTTGATTGTGGGAGCAAGACGAAGGAGAGGGCCATGGGAATT
 
. : . : . : . : . : . :
rJMFF014M14+ CTCAAACTGCATGCTAAGTCTTGGAAGAACTCTCCCTGTATTCCCATGAATTTGGCTTCT
rJMFF046L10+ CTCAAACTGCATGCTAAGTCTTGGAAGAACTCTCCCTGTATTCCCATGAATTTGGCTTCT
                      ____________________________________________________________
consensus CTCAAACTGCATGCTAAGTCTTGGAAGAACTCTCCCTGTATTCCCATGAATTTGGCTTCT
 
. : . : . : . : . : . :
rJMFF014M14+ TCTTACCCATCTTCTTGATGATGGTGATGAAGAACTTATTAGATAACATAGCAAT
rJMFF046L10+ TCTTACCCATCTTCTTGATGATGGTGATGAAGAACTTATTAGATAACATAGCAATTGAAA
                      ____________________________________________________________
consensus TCTTACCCATCTTCTTGATGATGGTGATGAAGAACTTATTAGATAACATAGCAATTGAAA
 
. : . : . : . : . : . :
rJMFF046L10+ AACAAGAGAAAATTGTGCAGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus AACAAGAGAAAATTGTGCAGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG