clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF035J19 | Sequence | 552 | 003280 (3) | ref|XP_007160953.1| | 5e-47 | hypothetical protein PHAVU_001G031200g [Phaseolus vulgaris] gb|ESW32947.1| hypot | 671 | 012453 (4) | ref|XP_002285467.2| | 3e-13 | PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Vitis vinifer |
JMFF046I15 | Sequence | 625 | 003280 (3) | ref|XP_007136788.1| | 2e-41 | hypothetical protein PHAVU_009G074300g [Phaseolus vulgaris] gb|ESW08782.1| hypot | 600 | 012453 (4) | gb|KJB63989.1| | 2e-10 | hypothetical protein B456_010G028100 [Gossypium raimondii] |
JMFF048J15 | Sequence | 406 | 003280 (3) | ref|XP_006581282.1| | 2e-05 | PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine | 276 | 012453 (4) | |||
JMSF016C15 | Sequence | 433 | 017798 | 796 | 012453 (4) | ref|XP_002510048.1| | 4e-38 | conserved hypothetical protein [Ricinus communis] gb|EEF52235.1| conserved hypot |
This contig is upended
. : . : . : . : . : . :
rJMSF016C15+ CTCGGGACCTTCAGCACCCAAGAAGGAAGCTGCAGAA
____________________________________________________________
consensus CTCGGGACCTTCAGCACCCAAGAAGGAAGCTGCAGAA
. : . : . : . : . : . :
rJMSF016C15+ GCTTATGACATTGCTGCNATCAAATTCCGTGGCATTAGTGCTGTCACAAACTTTGACATT
____________________________________________________________
consensus GCTTATGACATTGCTGCNATCAAATTCCGTGGCATTAGTGCTGTCACAAACTTTGACATT
. : . : . : . : . : . :
rJMSF016C15+ TCCAGATATGACGTGGACAAAATCTTGGCGAGCAATTCTCCGGCGGCCGGAGAATTATGC
rJMFF035J19+ TATGC
____________________________________________________________
consensus TCCAGATATGACGTGGACAAAATCTTGGCGAGCAATTCTCCGGCGGCCGGAGAATTATGC
. : . : . : . : . : . :
rJMSF016C15+ CGGCGAAACAAAGAAG-CCGCCGTGGAGTATAATGACATGGTTGGTCATCAGGAAAATAA
rJMFF035J19+ CGGCGAAACAAAGAAGCCCGCCGTGGAGTATAATGACATGGTTGGTCATCAGGAAAATAA
____________________________________________________________
consensus CGGCGAAACAAAGAAGCCCGCCGTGGAGTATAATGACATGGTTGGTCATCAGGAAAATAA
. : . : . : . : . : . :
rJMSF016C15+ CAGTAGTACTACTGGGACTGTTTCGGACTGGAAAATGGCATTGTATCAGGCGCCGCCGCA
rJMFF035J19+ CAGTAGTACTACTGGGACTGTTTCGGACTGGAAAATGGCATTGTATCAGGCGCCGCCGCA
rJMFF046I15+ CA
____________________________________________________________
consensus CAGTAGTACTACTGGGACTGTTTCGGACTGGAAAATGGCATTGTATCAGGCGCCGCCGCA
. : . : . : . : . : . :
rJMSF016C15+ GCAGCAAGAAGAACAGAATGCATGTTTTGAATCAAATCAGCAAAAACCCATCTTCTCAAT
rJMFF035J19+ GCAGCAAGAAGAACAGAATGCATGTTTTGAATCAAATCAGCAAAAACCCATCTTCTCAAT
rJMFF046I15+ GCAGCAAGAAGAACAGAATGCATG-TTTGAATCAAATCAGCAAAAACCCATCTTCTCAAT
____________________________________________________________
consensus GCAGCAAGAAGAACAGAATGCATGTTTTGAATCAAATCAGCAAAAACCCATCTTCTCAAT
. : . : . : . : . : . :
rJMSF016C15+ GGCGGTGCAGAATCTGATAGGGATGGATTCATCAATAATCCCCTCGGTTGAGACCGCCAT
rJMFF035J19+ GGCGGTGCAGAATCTGATAGGGATGGATTCATCAATAATCCCCTCGGTTGAGACCGCCAT
rJMFF046I15+ GGCGGTGCAGAATCTGATAGGGATGGATTCATCAATAATCCCCTCGGTTGAGACCGCCAT
____________________________________________________________
consensus GGCGGTGCAGAATCTGATAGGGATGGATTCATCAATAATCCCCTCGGTTGAGACCGCCAT
. : . : . : . : . : . :
rJMSF016C15+ TAACGAACCAAACAAGCTCAGCACCACCCATTTCTCCAACCCATCCTCCCTCGTCAGCAG
rJMFF035J19+ TAACGAACCAAACAAGCTCAGCACCACCCATTTCTCCAACCCATCCTCCCTCGTCAGCAG
rJMFF046I15+ TAACGAACCAAACAAGCTCAGCACCACCCATTTCTCCAACCCATCCTCCCTCGTCAGCAG
____________________________________________________________
consensus TAACGAACCAAACAAGCTCAGCACCACCCATTTCTCCAACCCATCCTCCCTCGTCAGCAG
. : . : . : . : . : . :
rJMSF016C15+ CCTGAGCAACTCCAGAGAAGCCAGCCCGGAATCAATGGCGTTCGGCGGCGCAAAGCCGAC
rJMFF035J19+ CCTGAGCAACTCCAGAGAAGCCAGCCCGGAATCAATGGCGTTCGGCGGCGCAAAGCCGAC
rJMFF046I15+ CCTGAGCAACTCCAGAGAAGCCAGCCCGGAATCAATGGCGTTCGGCGGCGCAAAGCCGAC
____________________________________________________________
consensus CCTGAGCAACTCCAGAGAAGCCAGCCCGGAATCAATGGCGTTCGGCGGCGCAAAGCCGAC
. : . : . : . : . : . :
rJMSF016C15+ ACTGGAAACCAAATTCTTGATTCCCACGACAAACAACGTACGACGGTCGCCTATGGATAT
rJMFF035J19+ ACTGGAAACCAAATTCTTGATTCCCACGACAAACAACGTACGACGGTCGCCTATGGATAT
rJMFF048J15+ TCGCCTATGGATAT
rJMFF046I15+ ACTGGAAACCAAATTCTTGATTCCCACGACAAACAACGTACGACGGTCGCCTATGGATAT
____________________________________________________________
consensus ACTGGAAACCAAATTCTTGATTCCCACGACAAACAACGTACGACGGTCGCCTATGGATAT
. : . : . : . : . : . :
rJMSF016C15+ CCCACTGTCCATGGCTCACTTTCCACTGTTCGCCGCCTGGAATGACAACTCTTAAAACTT
rJMFF035J19+ CCCACTGTCCATGGCTCACCTTCCACTGTTCGCCGCCTGGAATGACAACTCTTAAAACTT
rJMFF048J15+ CCCACTGTCCATGGCTCACCTTCCACTGTTCGCCGCCTGGAATGACAACTCTTAAAACTT
rJMFF046I15+ CCCACTGTCCATGGCTCACCTTCCACTGTTCGCCGCCTGGAATGACAACTCTTAAAACTT
____________________________________________________________
consensus CCCACTGTCCATGGCTCACCTTCCACTGTTCGCCGCCTGGAATGACAACTCTTAAAACTT
. : . : . : . : . : . :
rJMSF016C15+ CCCATACTTTCTGTTAACACGTGAAAGACTGAAAGCTAGATTCTTGCATGGAAACAGGAA
rJMFF035J19+ CCCATACTTTCTGTTAACACGTGAAAGACTGAAAGCTAGATTCTTGCATGGAAACAGGAA
rJMFF048J15+ CCCATACTTTCTGTTAACACGTGAAAGACTGAAAGCTAGATTCTCTCATGGAAACAGGAA
rJMFF046I15+ CCCATACTTTCTGTTAACACGTGAAAGACTGAAAGCTAGATTCTTGCATGGAAACAGGAA
____________________________________________________________
consensus CCCATACTTTCTGTTAACACGTGAAAGACTGAAAGCTAGATTCTTGCATGGAAACAGGAA
. : . : . : . : . : . :
rJMSF016C15+ ATCAACAGGACGACGTA-GGAATTTACGTACTACAATCACGAAATGAATTACGACCTAGA
rJMFF035J19+ ATCAACAGGACGACGTA-GGAATTTACGTACTACAATCACGAAATGAATTACGACCTAGA
rJMFF048J15+ ATCAACTGGACGACGTATGGTATTTACGTACTACAATCACGAAATGAATTACGACCTAGA
rJMFF046I15+ ATCAACAGGACGACGTA-GGAATTTACGTACTACAATCACGAAATGAATTACGACCTAGA
____________________________________________________________
consensus ATCAACAGGACGACGTA-GGAATTTACGTACTACAATCACGAAATGAATTACGACCTAGA
. : . : . : . : . : . :
rJMSF016C15+ TTGTCTGTAACTTAGTTTTGGATT
rJMFF035J19+ TTGTCTGTAACTTAGTTTTGGATTCTGGGGTATACTGCCATTTAGATTCTGC
rJMFF048J15+ TTGTCTGTAACTTAGTTTTGGATTCTGGGGTATACTGCCATTTAGACTCTGC
rJMFF046I15+ TTGTCTGTAACTTAGTTTTGGATTCTGGGGTATACTGCCATTTAGATTCTGCAATGAAAT
____________________________________________________________
consensus TTGTCTGTAACTTAGTTTTGGATTCTGGGGTATACTGCCATTTAGATTCTGCAATGAAAT
. : . : . : . : . : . :
rJMFF046I15+ GAAATCAAATATTTTCTGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus GAAATCAAATATTTTCTGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG