Contig 012434:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF044O05-                                      GGCCATCCATCATCCTCCTTGATCATATATACA
                      ____________________________________________________________
consensus                                        GGCCATCCATCATCCTCCTTGATCATATATACA
 
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JMFF044O05-           CTCAATACACACTGCTTTTCTTGCTCTCAAATGGAGATATTTTCTCTAAGCAAAATGACC
JMFF004E18-                                     TCAAATGGAGATATTTTCTCTAAGCAAAATGACC
                      ____________________________________________________________
consensus             CTCAATACACACTGCTTTTCTTGCTCTCAAATGGAGATATTTTCTCTAAGCAAAATGACC
 
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JMFF044O05-           GTCTTTCCCATATATTTTTTCACTTCACTTTGCTTGATTTTGCTCCTCCCACCACTTTGC
JMFF004E18-           GTCTTTCCCATATATTTTTTCACTTCACTTTGCTTGATTTTGCTCCTCCCACCACTTTGC
rJMFF004E18+                                                                     C
                      ____________________________________________________________
consensus             GTCTTTCCCATATATTTTTTCACTTCACTTTGCTTGATTTTGCTCCTCCCACCACTTTGC
 
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JMFF044O05-           TACTGCCAACAAAATTTCTCTTCAAGAGCCTCCTATTACAAAACAAATGACGAAATGGGT
JMFF004E18-           TACTGCCAACAAAATTTCTCTTCAAGAGCCTCCTATTACAAAACAAATGACGAAATGGGT
rJMFF004E18+          TACTGCCAACAAAATTTCTCTTCAAGAGCCTCCTATTACAAAACAAATGACGAAATGGGT
                      ____________________________________________________________
consensus             TACTGCCAACAAAATTTCTCTTCAAGAGCCTCCTATTACAAAACAAATGACGAAATGGGT
 
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JMFF044O05-           AATCCAAATGGAGCGTGTGGCTACGGCGATTATGGAAGAAACACCAACGCCGGTGAAGTT
JMFF004E18-           AATCCAAATGGAGCGTGTGGCTACGGCGATTATGGAAGAAACACCAACGCCGGTGAAGTT
rJMFF004E18+          AATCCAAATGGAGCGTGTGGCTACGGCGATTATGGAAGAAACACCAACGCCGGTGAAGTT
                      ____________________________________________________________
consensus             AATCCAAATGGAGCGTGTGGCTACGGCGATTATGGAAGAAACACCAACGCCGGTGAAGTT
 
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JMFF044O05-           TGCGCCGTCTCCAGTCGGCTTTTCAAGAACGGTGCTGCTTGTGGAGCTTGCTATCAGGTG
JMFF004E18-           TGCGCCGTCTCCAGTCGGCTTTTCAAGAACGGTGCTGCTTGTGGAGCTTGCTATCAGGTG
rJMFF004E18+          TGCGCCGTCTCCAGTCGGCTTTTCAAGAACGGTGCTGCTTGTGGAGCTTGCTATCAGGTG
                      ____________________________________________________________
consensus             TGCGCCGTCTCCAGTCGGCTTTTCAAGAACGGTGCTGCTTGTGGAGCTTGCTATCAGGTG
 
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JMFF044O05-           AGGTGTAAGAGCAGTGGATTATGCAGTGATTTGGGAGAAAAAGTAATGGCGACCGACTAC
JMFF004E18-           AGGTGTAAGAGCAGTGGATTATGCAGTGATTTGGGAGAAAAAGTAATGGCGACCGACTAC
rJMFF004E18+          AGGTGTAAGAGCAGTGGATTATGCAGTGATTTGGGAGAAAAAGTAATGGCGACCGACTAC
rJMFF044O05+              GTAAGAGCAGTGGATTATGCAGTGATTTGGGAGAAAAAGTAATGGCGACCGACTAC
                      ____________________________________________________________
consensus             AGGTGTAAGAGCAGTGGATTATGCAGTGATTTGGGAGAAAAAGTAATGGCGACCGACTAC
 
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JMFF044O05-           GTAGAAGGGCAGGAAACAGACTTCATTCTGAGCTACCGCGCCTTCACAGCACTAGCGAAG
JMFF004E18-           GTAGAAGGGCAGGAAACAGACTTCATTCTGAGCTACCGCGCCTTCACAGCACTAGCGAAG
rJMFF004E18+          GTAGAAGGGCAGGAAACAGACTTCATTCTGAGCTACCGCGCCTTCACAGCACTAGCGAAG
rJMFF044O05+          GTAGAAGGGCAGGAAACAGACTTCATTCTGAGCTACCGCGCCTTCACAGCACTAGCGAAG
                      ____________________________________________________________
consensus             GTAGAAGGGCAGGAAACAGACTTCATTCTGAGCTACCGCGCCTTCACAGCACTAGCGAAG
 
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JMFF044O05-           CAGCCAAGGATGGCGGAGTTTCTGACGGAGAAAGGCGCCGTGGACGTGGAATTCCGGCGG
JMFF004E18-           CAGCCAAGGATGGCGGAGTTTCTGACGGAGAAAGGCGCCGTGGACGTGGAATTCCGGCGG
rJMFF004E18+          CAGCCAAGGATGGCGGAGTTTCTGACGGAGAAAGGCGCCGTGGACGTGGAATTCCGGCGG
rJMFF044O05+          CAGCCAAGGATGGCGGAGTTTCTGACGGAGAAAGGCGCCGTGGACGTGGAATTCCGGCGG
                      ____________________________________________________________
consensus             CAGCCAAGGATGGCGGAGTTTCTGACGGAGAAAGGCGCCGTGGACGTGGAATTCCGGCGG
 
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JMFF044O05-           GTTTCTTGCAATTCCGCCGCCAAACTCAGGGTCAAGATCCACGACAATAGCCAGTACCCT
JMFF004E18-           GTTTCTTGCAATTCCGCCGCCAAACTCAGGGTCAAGATCCACGACAATAGCCAGTACCCT
rJMFF004E18+          GTTTCTTGCAATTCCGCCGCCAAACTCAGGGTCAAGATCCACGACAATAGCCAGTACCCT
rJMFF044O05+          GTTTCTTGCAATTCCGCCGCCAAACTCAGGGTCAAGATCCACGACAATAGCCAGTACCCT
                      ____________________________________________________________
consensus             GTTTCTTGCAATTCCGCCGCCAAACTCAGGGTCAAGATCCACGACAATAGCCAGTACCCT
 
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JMFF044O05-           CACTACCTATCCATTCTCCTAACCAACCAAGGCGGTGCCAGTGACATCTT          
JMFF004E18-           CACTACCTATCCATTCTCCTAACCAACCAAGGCGGTGCCAGTGACATCTT          
rJMFF004E18+          CACTACCTATCCATTCTCCTAACCAACCAAGGCGGTGCCAGTGACATCTTCGCAGTTGAG
rJMFF044O05+          CACTACCTATCCATTCTCCTAACCAACCAAGGCGGTGCCAGTGACATCTTCGCAGTTGAG
                      ____________________________________________________________
consensus             CACTACCTATCCATTCTCCTAACCAACCAAGGCGGTGCCAGTGACATCTTCGCAGTTGAG
 
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rJMFF004E18+          ATCTACGAGGAAGAAACGTATCAATGGATATCGATGAGGAGGGCATTCGGGGCAGTATGG
rJMFF044O05+          ATCTACGAGGAAGAAACGTATCAATGGATATCGATGAGGAGGGCATTCGGGGCAGTATGG
                      ____________________________________________________________
consensus             ATCTACGAGGAAGAAACGTATCAATGGATATCGATGAGGAGGGCATTCGGGGCAGTATGG
 
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rJMFF004E18+          GACCTGGCCAACCCACCCAGTGGAGAACTGAGGGTGAGGTTTCTGGTGAGTAGCAGCGCG
rJMFF044O05+          GACCTGGCCAACCCACCCAGTGGAGAACTGAGGGTGAGGTTTCTGGTGAGTAGCAGCGCG
                      ____________________________________________________________
consensus             GACCTGGCCAACCCACCCAGTGGAGAACTGAGGGTGAGGTTTCTGGTGAGTAGCAGCGCG
 
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rJMFF004E18+          GCGGCGAGATGGGTGGAGTCGGAAAAGGCAATAATTCCGGCGGAGTGGAAAGCTGGGCTC
rJMFF044O05+          GCGGCGAGATGGGTGGAGTCGGAAAAGGCAATAATTCCGGCGGAGTGGAAAGCTGGGCTC
                      ____________________________________________________________
consensus             GCGGCGAGATGGGTGGAGTCGGAAAAGGCAATAATTCCGGCGGAGTGGAAAGCTGGGCTC
 
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rJMFF004E18+          ACCATTGAGACTAACATTAAACTTAACTAATTAAATAAATTGAGTCAGCTTAGTTGCTTG
rJMFF044O05+          ACCATTGAGACTAACATTAAACTTAACTAATTAAATAAATTGAGTCAGCTTAGTTGCTTG
                      ____________________________________________________________
consensus             ACCATTGAGACTAACATTAAACTTAACTAATTAAATAAATTGAGTCAGCTTAGTTGCTTG
 
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rJMFF004E18+          CTTTAGATATTATAAGACTATCAATCAGTTTACAATATA                     
rJMFF044O05+          CTTTAGATATTATAAGACTATCAATCAGTTTACAATATATGAATAAATTCAGGCTTTGAG
                      ____________________________________________________________
consensus             CTTTAGATATTATAAGACTATCAATCAGTTTACAATATATGAATAAATTCAGGCTTTGAG