Contig 012417:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026N23Sequence635007393 (3)emb|CDP08260.1|5e-34unnamed protein product [Coffea canephora]756012417 (3)ref|XP_011081683.1|1e-90PREDICTED: zinc transporter 4, chloroplastic-like [Sesamum indicum]
JMFF043D04Sequence666007393 (3)emb|CDP08260.1|5e-42unnamed protein product [Coffea canephora]605012417 (3)ref|XP_011081683.1|3e-91PREDICTED: zinc transporter 4, chloroplastic-like [Sesamum indicum]
JMSF009E15Sequence272007393 (3)751012417 (3)ref|XP_011081683.1|2e-108PREDICTED: zinc transporter 4, chloroplastic-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009E15+ GTCTGACACTG
                      ____________________________________________________________
consensus GTCTGACACTG
 
. : . : . : . : . : . :
rJMSF009E15+ TAATTGTTCCAGTGGAGACAAAAGGGAGGAATGGGAAGTTGTTTGGGGAAGAAGAAGGAG
rJMFF026N23+ GTGGAGACAAAAGGGAGGAATGGGAAGTTGTTTGGGGAAGAAGAAGGAG
                      ____________________________________________________________
consensus TAATTGTTCCAGTGGAGACAAAAGGGAGGAATGGGAAGTTGTTTGGGGAAGAAGAAGGAG
 
. : . : . : . : . : . :
rJMSF009E15+ GCGCAATTCACATTGTTGGGATGCATGCACATGCAGCTCATCATAGACATAGCCACTCTC
rJMFF026N23+ GCGCAATTCACATTGTTGGGATGCATGCACATGCAGCTCATCATAGACATAGCCACTCTC
                      ____________________________________________________________
consensus GCGCAATTCACATTGTTGGGATGCATGCACATGCAGCTCATCATAGACATAGCCACTCTC
 
. : . : . : . : . : . :
rJMSF009E15+ AAGAAGCAGGTGCATGTGAAGGCCATACAAAGGAGCATTCACATGGTCATTCACATTCCC
rJMFF026N23+ AAGAAGCAGGTGCATGTGAAGGCCATACAAAGGAGCATTCACATGGTCATTCACATTCCC
                      ____________________________________________________________
consensus AAGAAGCAGGTGCATGTGAAGGCCATACAAAGGAGCATTCACATGGTCATTCACATTCCC
 
. : . : . : . : . : . :
rJMSF009E15+ AC-TCACACAGTTTTGGTCATGGGGATGAGGAAAATGGTGTGAGGCATGTAGTTGTTTCG
rJMFF026N23+ ACTTCACACAGTTTTGGTCATGGGGATGAGGAAAATGGTGTGAGGCATGTAGTTGTTTCG
rJMFF043D04+ TCACACAGTTTTGGTCATGGGGATGAGGAAAATGGTGTGAGGCATGTAGTTGTTTCG
                      ____________________________________________________________
consensus ACTTCACACAGTTTTGGTCATGGGGATGAGGAAAATGGTGTGAGGCATGTAGTTGTTTCG
 
. : . : . : . : . : . :
rJMSF009E15+ CAGGTTTTGGAACTTGGTATAGTATCTCACTCGATGATTATTGGTCTATCGCTTGGGGTT
rJMFF026N23+ CAGGTTTTGGAACTTGGTATAGTATCTCACTCGATGATTATTGGTCTATCGCTTGGGGTT
rJMFF043D04+ TAGGTTTTGGAACTTGGTATAGTATCTCACTCGATGATTATTGGTCTATCGCTTGGGGTT
                      ____________________________________________________________
consensus CAGGTTTTGGAACTTGGTATAGTATCTCACTCGATGATTATTGGTCTATCGCTTGGGGTT
 
. : . : . : . : . : . :
rJMSF009E15+ TCAGAAAGTCCATGCACAATTAGACCCTTGATTGCAGCACTAGCATTCCATCAGTTCTTT
rJMFF026N23+ TCAGAAAGTCCATGCACAATTAGACCCTTGATTGCAGCACTAGCATTCCATCAGTTCTTT
rJMFF043D04+ TCAGAAAGTCCATGCACAATTAGACCCTTGATTGCAGCACTAGCATTCCATCAGTTCTTT
                      ____________________________________________________________
consensus TCAGAAAGTCCATGCACAATTAGACCCTTGATTGCAGCACTAGCATTCCATCAGTTCTTT
 
. : . : . : . : . : . :
rJMSF009E15+ GAAGGGTTTGCTTTAGGAGGATGCATTTCGCAGGCCCAGTTTAGGACTCTACGCTCCACT
rJMFF026N23+ GAAGGGTTTGCTTTAGGAGGATGCATTTCGCAGGCCCAGTTTAGGACTCTACGCTCCACT
rJMFF043D04+ GAAGGGTTTGCTTTAGGAGGATGCATTTCGCAGGCCCAGTTTAGGACTCTACGCTCCACT
                      ____________________________________________________________
consensus GAAGGGTTTGCTTTAGGAGGATGCATTTCGCAGGCCCAGTTTAGGACTCTACGCTCCACT
 
. : . : . : . : . : . :
rJMSF009E15+ CTAATGGCCACGTTTTTTGCTGTAACAACCCCCTTAGGGATTGCTGCGGGCCTGTGTGTT
rJMFF026N23+ CTAATGGCCACGTTTTTTGCTGTAACAACCCCCTTAGGGATTGCTGCGGGCCTGTGTGTT
rJMFF043D04+ CTAATGGCCACGTTTTTTGCTGTAACAACCCCCTTAGGGATTGCTGCGGGCCTGTGTGTT
                      ____________________________________________________________
consensus CTAATGGCCACGTTTTTTGCTGTAACAACCCCCTTAGGGATTGCTGCGGGCCTGTGTGTT
 
. : . : . : . : . : . :
rJMSF009E15+ TCCTCATTCTATAATCCGAGTAGCCCTAGAGCGATGGTAGTGGAGGGCATCTTCGACTCT
rJMFF026N23+ TCCTCATTCTATAATCCGAGTAGCCCTAGAGCGATGGTAGTGGAGGGCATCTTCGACTCT
rJMFF043D04+ TCCTCATTCTATAATCCGAGTAGCCCTAGAGCGATGGTAGTGGAGGGCATCTTCGACTCT
                      ____________________________________________________________
consensus TCCTCATTCTATAATCCGAGTAGCCCTAGAGCGATGGTAGTGGAGGGCATCTTCGACTCT
 
. : . : . : . : . : . :
rJMSF009E15+ ATCTCTGCCGGAATCCTAGTCTACATGGCTTTGGTGGACTTAATTGCCGCCGATTTCTTG
rJMFF026N23+ ATCTCTGCCGGAATCCTAGTCTACATGGCTTTGGTGGACTTAATTGCCGCCGATTTCTTG
rJMFF043D04+ ATCTCTGCCGGAATCCTAGTCTACATGGCTTTGGTGGACTTAATTGCCGCCGATTTCTTG
                      ____________________________________________________________
consensus ATCTCTGCCGGAATCCTAGTCTACATGGCTTTGGTGGACTTAATTGCCGCCGATTTCTTG
 
. : . : . : . : . : . :
rJMSF009E15+ AGCAAAAAGATGAGCTGCAATACCAGGCTTCAGATAGCTTCATATTTTTGCCTGTTTTTA
rJMFF026N23+ AGCAAAAAGATGAGCTGCAATACCAGGCTTCAGATAGCTTCATATTTTTGCCTGTTTTTA
rJMFF043D04+ AGCAAAAAGATGAGCTGCAATACCAGGCTTCAGATAGCTTCATATTTTTGCCTGTTTTTA
                      ____________________________________________________________
consensus AGCAAAAAGATGAGCTGCAATACCAGGCTTCAGATAGCTTCATATTTTTGCCTGTTTTTA
 
. : . : . : . : . : . :
rJMSF009E15+ GGGTCTCTACTGATGTCATCTCTGGCAATATGGGCTTGAATTCACATAATTTGTTGCATG
rJMFF026N23+ GGGTCTCTACTGATGTCATCTCTGGCAATATGGGCTTGAATTCACATAATTTGTTGCATG
rJMFF043D04+ GGGTCTCTACTGATGTCATCTCTGGCAATATGGGCTTGAATTCACATAATTTGTTGCATG
                      ____________________________________________________________
consensus GGGTCTCTACTGATGTCATCTCTGGCAATATGGGCTTGAATTCACATAATTTGTTGCATG
 
. : . : . : . : . : . :
rJMSF009E15+ CATATGCTGTTTAGCTTTTGT
rJMFF026N23+ CATATGCTGTTTAGCTTTTGTTGTTTTCTTAGGAAATCCAA
rJMFF043D04+ CATATGCTGTTTAGCTTTTGTTGTTTTCTTAGGAAATCCAATAAAAGCATTGTTTGTGTT
                      ____________________________________________________________
consensus CATATGCTGTTTAGCTTTTGTTGTTTTCTTAGGAAATCCAATAAAAGCATTGTTTGTGTT