Contig 012415:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002H02+                              AGTCAGAGCTGCAGGGGTACCTATCAGCAACCCAAGGCCG
                      ____________________________________________________________
consensus                                 AGTCAGAGCTGCAGGGGTACCTATCAGCAACCCAAGGCCG
 
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rJMSF002H02+          AGTGGATCGGTGTATGGAATTGATTCAAGCTGCATCTGATGTTCAAGAACAAGGGGCTGT
                      ____________________________________________________________
consensus             AGTGGATCGGTGTATGGAATTGATTCAAGCTGCATCTGATGTTCAAGAACAAGGGGCTGT
 
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rJMSF002H02+          GGATGATCGTGACACTTTTCTTCATGGTGTCAGAGACCTTTTAAGCATTTACTCAAATGC
                      ____________________________________________________________
consensus             GGATGATCGTGACACTTTTCTTCATGGTGTCAGAGACCTTTTAAGCATTTACTCAAATGC
 
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rJMSF002H02+          TCAAGCTGGTTTATCAACATATGTTTCTGCACCGGGCATTATTCAGCAGATATCTAGCCT
                      ____________________________________________________________
consensus             TCAAGCTGGTTTATCAACATATGTTTCTGCACCGGGCATTATTCAGCAGATATCTAGCCT
 
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rJMSF002H02+          TCGTTCGGACCTAATGACATTACAGTATGATCTTGAGCATACCCTTCCAGAGGACAGATA
                      ____________________________________________________________
consensus             TCGTTCGGACCTAATGACATTACAGTATGATCTTGAGCATACCCTTCCAGAGGACAGATA
 
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rJMSF002H02+          TAAATGTATAAACAAATTGTGCACTCTTGTCCAGAGTTTACAGCAACTATTATTTGCATC
                      ____________________________________________________________
consensus             TAAATGTATAAACAAATTGTGCACTCTTGTCCAGAGTTTACAGCAACTATTATTTGCATC
 
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rJMSF002H02+          ATCAACAACAGCTCAACCAATATTGACTCCAAGGGAATTAATGAAAGAGCTTGATGAAAT
                      ____________________________________________________________
consensus             ATCAACAACAGCTCAACCAATATTGACTCCAAGGGAATTAATGAAAGAGCTTGATGAAAT
 
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rJMSF006J16+                                                              CACTGGAA
rJMSF002H02+          GGAGAAGGCCAATGCAAAACTCTCAACTGCAGTTGAAGAAGTGACTCATGAGCACTGGAA
                      ____________________________________________________________
consensus             GGAGAAGGCCAATGCAAAACTCTCAACTGCAGTTGAAGAAGTGACTCATGAGCACTGGAA
 
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rJMSF006J16+          GAAGANTGAGNTTGTGAAACACCATAANGAGGAGGTGGCACNTCAGAGGCGGGTGTTTGT
rJMSF002H02+          GAAGAATGAGATTGTGAAACACCATAAAGAGGAGGTGGCACTTCAGAGGCGGGTGTTTGT
                      ____________________________________________________________
consensus             GAAGAATGAGATTGTGAAACACCATAAAGAGGAGGTGGCACTTCAGAGGCGGGTGTTTGT
 
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rJMSF005D01+                              AACGTTTGAGAAACCAAGTCAGGGAGCTCACTGCTCGGGC
rJMSF006J16+          AGATTTNTTNTGCAATCCCGAACGTTTGAGAAACCAAGTCAGGGAGCTCNCTGCTCGGGT
rJMSF002H02+          AGATTTCTTCTGCAATCCCGAACGTTTGAGAAACCAAGTCAGGGAGCTCACTGCTCGGGT
                      ____________________________________________________________
consensus             AGATTTCTTCTGCAATCCCGAACGTTTGAGAAACCAAGTCAGGGAGCTCACTGCTCGGGT
 
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rJMSF005D01+          TAGGGCGTTGCAAGCATCGTNGAATCATCTTTCATACTGCATGATGTTTTGGTGTGAATT
rJMSF006J16+          TAGGGCGTTGCAAGCATCGTAGAATCATCTTTCATACTGC-TGATGTTTTGGTGTGAATT
rJMSF002H02+          TAGGGCGTTGCAAGCATCGTAGAATCATCTTTCATACTGC-TGATGTTTTGGTGTGAATT
rJMFF043B01+                                              CTGC-TGAAGTTTTGGGGTGAATT
                      ____________________________________________________________
consensus             TAGGGCGTTGCAAGCATCGTAGAATCATCTTTCATACTGC-TGATGTTTTGGTGTGAATT
 
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rJMSF005D01+          GTCGCCAGCCAGGCAGCCAGCTAAGGTCGTCTTGTTTTTTCTCGTATATGATGTATGA  
rJMSF006J16+          GTCGCCAGCCAGGCAGCCAGCTAAGGTTGTTTTGTTTTTTCTCGTATATGATGTATGATG
rJMSF002H02+          GTCGCCAGCCAGGCAGCCAGCTAAGGTTGTTTTGTTTTTTCTTGTATATGATGTATGATG
rJMFF043B01+          GTTGCCAGCCAGGCAGCCAGCTAAGGGTGTTTTGTTTTTTTTTGTATATGAAGTATGATG
                      ____________________________________________________________
consensus             GTCGCCAGCCAGGCAGCCAGCTAAGGTTGTTTTGTTTTTTCTTGTATATGATGTATGATG
 
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rJMSF006J16+          NTAACTACTTGTATTCCCCTCAGGACATATAATTTGTATTAGTACACTCTA         
rJMSF002H02+          TTAACTACTTGTATTCCCCTCAGGACATATAATTTGTATTAGTACACTCTATCCAACTGG
rJMFF043B01+          TTAACTACTTGTATTCCCCTCAGGACAAATAATTTGTATTAGTACCCTCTATCCAACTGG
                      ____________________________________________________________
consensus             TTAACTACTTGTATTCCCCTCAGGACATATAATTTGTATTAGTACACTCTATCCAACTGG
 
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rJMSF002H02+          GTTG                                                        
rJMFF043B01+          GTTGTGGATTTTTAATTGAATGAGTAGTGCTTGTTTTTGCATAATAAAGTGTCCCCAAAG
                      ____________________________________________________________
consensus             GTTGTGGATTTTTAATTGAATGAGTAGTGCTTGTTTTTGCATAATAAAGTGTCCCCAAAG