Contig 012406:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042D16Sequence639018472450012406 (7)ref|XP_007031010.1|5e-09RING/U-box superfamily protein isoform 1 [Theobroma cacao] gb|EOY11512.1| RING/U
JMSF017G17Sequence462010652 (6)gb|KHG26714.1|3e-05E3 ubiquitin-protein ligase RFWD3 [Gossypium arboreum]803012406 (7)ref|XP_004230247.1|224PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF021C16Sequence695010652 (6)ref|XP_011092090.1|4e-66PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]786012406 (7)ref|XP_004230247.1|258PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF028C03Sequence639010652 (6)ref|XP_011092090.1|3e-46PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]700012406 (7)ref|XP_004230247.1|220PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF034O12Sequence666010652 (6)ref|XP_011092090.1|3e-64PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]689012406 (7)ref|XP_004230247.1|220PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF052I05Sequence678010652 (6)ref|XP_011092090.1|4e-64PREDICTED: uncharacterized protein LOC105172390 isoform X2 [Sesamum indicum]863012406 (7)ref|XP_004230247.1|297PREDICTED: uncharacterized protein LOC101256712 [Solanum lycopersicum]
JMSF052O15Sequence675010652 (6)ref|XP_011092089.1|3e-56PREDICTED: uncharacterized protein LOC105172390 isoform X1 [Sesamum indicum]925012406 (7)ref|XP_009607263.1|6e-106PREDICTED: uncharacterized protein LOC104101509 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF052O15+            TACTTTTAACAATCACTGGAGCAGTCCTTCAATTCCACATGAAGTTCCTACTTATGCT
                      ____________________________________________________________
consensus               TACTTTTAACAATCACTGGAGCAGTCCTTCAATTCCACATGAAGTTCCTACTTATGCT
 
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rJMSF017G17+                                                                  TACA
rJMSF052I05+             CCAGGTGTGGATGTCCACTATCACAGTTGGGATCACCATTCATCTGCTTTCCCTACA
rJMSF052O15+          TTCCCAGGTGTGGATGTCCACTATCACAGTTGGGATCACCATTCATCTGCTTTCCCTACA
                      ____________________________________________________________
consensus             TTCCCAGGTGTGGATGTCCACTATCACAGTTGGGATCACCATTCATCTGCTTTCCCTACA
 
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rJMSF021C16+                             AATGCTGGTCAGCCCTCAATTCCGCCTGTTCNTCATAGAGC
rJMSF017G17+          ACAAGCAGCCGAATTGGTAAATGCTGATCAGCCCTCAATTCCGCCTGTTCCTCATAGAGC
rJMSF052I05+          ACAAGCAGCCGAATTGGT-AATGCTGATCAGCCCTCAATTCCGCCTGTTCCTCATAGAGC
rJMSF052O15+          ACAAGCAGCCGAATTGGT-AATGCTGATCAGCCCTCAATTCCGCCTGTTCCTCATAGAGC
                      ____________________________________________________________
consensus             ACAAGCAGCCGAATTGGT-AATGCTGATCAGCCCTCAATTCCGCCTGTTCCTCATAGAGC
 
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rJMSF021C16+          TGCTCGAACAAACTCTGATATACCAAGACAAGGATCTTTTGTCCACCCTTTCCTTGTCAG
rJMSF017G17+          TGCTCGAACAAACTCTGATATACCAAGACAAGGATCTTTTGTCCACCCTTTCC-TGTCAG
rJMSF052I05+          TGCTCGAACAAACTCTGATATACCAAGACAAGGATCTTTTGTCCACCCTTTCCTTGTCAG
rJMSF034O12+                                                              CTTGTCAG
rJMSF028C03+                                                                  TCAG
rJMSF052O15+          TGCTCGAACAAACTCTGATATACCAAGACAAGGATCTTTTGTCCACCCTTTCCTTGTCAG
                      ____________________________________________________________
consensus             TGCTCGAACAAACTCTGATATACCAAGACAAGGATCTTTTGTCCACCCTTTCCTTGTCAG
 
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rJMSF021C16+          TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
rJMSF017G17+          TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
rJMSF052I05+          TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
rJMSF034O12+          TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
rJMSF028C03+          TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
rJMSF052O15+          TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
                      ____________________________________________________________
consensus             TCACGGTTCTGGTGCTAGAGCAGGAAGTTCAGTTGCATCATCGATGATTCCTCCCTATCC
 
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rJMSF021C16+          TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
rJMSF017G17+          TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
rJMSF052I05+          TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
rJMSF034O12+          TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
rJMSF028C03+          TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
rJMSF052O15+          TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
                      ____________________________________________________________
consensus             TGGAAGTGTGGCTCGGGCCCGCGACCGTGTTCAGGCTCTTCAAGCTTATTTTCAACAGCC
 
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rJMSF021C16+          AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
rJMSF017G17+          AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
rJMSF052I05+          AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
rJMSF034O12+          AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
rJMSF028C03+          AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
rJMSF052O15+          AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
                      ____________________________________________________________
consensus             AAGCAATTCACCTGGTGTTCGTGCCCCAGTAATAGTTGGAACACGGAGATCCAGTAATCA
 
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rJMSF021C16+          CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
rJMSF017G17+          CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
rJMSF052I05+          CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
rJMSF034O12+          CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
rJMSF028C03+          CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
rJMSF052O15+          CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
                      ____________________________________________________________
consensus             CCGGGGCATGGCTCAAGTGAGTCCAATGGCCTCATCCTCTGATCAGGCTGGTGGCTTTTA
 
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rJMSF021C16+          CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
rJMSF017G17+          CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
rJMSF052I05+          CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
rJMSF034O12+          CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
rJMSF028C03+          CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
rJMSF052O15+          CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
rJMFF042D16+                                       CCTTTCAAGAAGCAGAAAATTCCAGGTCCAT
                      ____________________________________________________________
consensus             CTTCTATCCCTCTGCTTCATCTGGAAGAGCCTTTCAAGAAGCAGAAAATCCCATGTCCAA
 
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rJMSF021C16+          TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
rJMSF017G17+          TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
rJMSF052I05+          TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
rJMSF034O12+          TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
rJMSF028C03+          TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
rJMSF052O15+          TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
rJMFF042D16+          TCGGTTCCTTATTTGGGAGCGCGAACACAGGGGTGCACCTTCTTCCTTGAACCAGGTTGG
                      ____________________________________________________________
consensus             TCGGTTCCCTATTTGGGAGCGAGAACACATGGCTGCAGCCTCCTCCTTGAACCAGGTTGA
 
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rJMSF021C16+          TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
rJMSF017G17+          TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
rJMSF052I05+          TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
rJMSF034O12+          TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
rJMSF028C03+          TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
rJMSF052O15+          TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
rJMFF042D16+          TGGAGATCCAATTTGGGGGTGGTTTCTCCATGGAGATGGTGGGTGTGATCCGGGAATCAG
                      ____________________________________________________________
consensus             TCGAGATCCAATTTGGGGGTCGTTTCACCATGGAGCTGGTGGGTCTGATCCGGGAATCAG
 
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rJMSF021C16+          ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
rJMSF017G17+          ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
rJMSF052I05+          ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
rJMSF034O12+          ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
rJMSF028C03+          ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
rJMSF052O15+          ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
rJMFF042D16+          ATTCACCAGGTTTTCCCAGAGGCAACATGGATTTGAGAGGATGCGATTTCAACATCGGTC
                      ____________________________________________________________
consensus             ATTCAGCAGCTTTCGCCAGAGGCAGCATGGATCTGAGAGGATGCCATCTCAACATCGGTC
 
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rJMSF021C16+          ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
rJMSF017G17+          ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
rJMSF052I05+          ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
rJMSF034O12+          ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
rJMSF028C03+          ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
rJMSF052O15+          ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
rJMFF042D16+          ATAGGTTTGTTTGTAGTGTTATGATGGGTCAAGGGCGGACCCCCCCCAATTTAAGGGTGT
                      ____________________________________________________________
consensus             ATAGGTTTGTTTGTAGTGTTATGATGAGACTATGACTGAACCCACCCAATTTATGTGTGT
 
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rJMSF021C16+          TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
rJMSF017G17+          TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
rJMSF052I05+          TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
rJMSF034O12+          TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
rJMSF028C03+          TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
rJMSF052O15+          TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
rJMFF042D16+          TTGAGATGGAAACCAATCTTTTAAGGTTGGAGTTGGTCAAAGGGGACAGGTTCAGATCTG
                      ____________________________________________________________
consensus             TTGAGATCGAAAACAATCTGTTAAGGTTGGAGTCTGTCAAAGTGGACAGGTTCAGAACTG
 
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rJMSF021C16+          TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
rJMSF017G17+          TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
rJMSF052I05+          TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
rJMSF034O12+          TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
rJMSF028C03+          TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
rJMSF052O15+          TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
rJMFF042D16+          TTTTGGGGCCCGTAAATAAGATTTTTTATGTTGTGGCCCCATGCATGGTTGTGGGATAAA
                      ____________________________________________________________
consensus             TTGTGTGGCCCTGAAATGAGACTCTTTATGTAGTGGCCACATGCATGGTTGTGTGATAGA
 
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rJMSF021C16+          -CAGTGGCTGGCTTCATG                                          
rJMSF017G17+          -CAGTGGCTGGCTTCATGCCC                                       
rJMSF052I05+          NCAGTGGCTGGCTTCATGCCCT                                      
rJMSF034O12+          -CAGTGGCTGGCTTCATGCCCT                                      
rJMSF028C03+          -CAGTGGCTGGCTTCATGCCC                                       
rJMSF052O15+          NCAGTGGCTGGCTTCATGCCCT                                      
rJMFF042D16+          -CAGTGGCCGGTTTCATGCCCGGGTTTCATTTGGGGGTTAAAATAACCCTCTTTTGTTTT
                      ____________________________________________________________
consensus             -CAGTGGCTGGCTTCATGCCCTGGTTTCATTTGGGGGTTAAAATAACCCTCTTTTGTTTT