Contig 012397:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N15Sequence480007850 (3)ref|XP_009587566.1|2e-62PREDICTED: laccase-17-like [Nicotiana tomentosiformis]757012397 (3)ref|XP_011094887.1|3e-84PREDICTED: laccase-17-like [Sesamum indicum]
JMSF018I23Sequence366007850 (3)ref|XP_009796361.1|3e-35PREDICTED: laccase-17-like [Nicotiana sylvestris]739012397 (3)ref|XP_011077639.1|5e-99PREDICTED: laccase-17-like [Sesamum indicum]
JMSF049D09Sequence681007850 (3)ref|XP_009796361.1|2e-108PREDICTED: laccase-17-like [Nicotiana sylvestris]748012397 (3)ref|XP_011094887.1|2e-87PREDICTED: laccase-17-like [Sesamum indicum]

Alignment

This contig is upended


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rJMSF018I23+                                   TGCTTCAATTAACAATGTATCTTTTGTGCAGCCTA
                      ____________________________________________________________
consensus                                      TGCTTCAATTAACAATGTATCTTTTGTGCAGCCTA
 
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rJMSF018I23+          CCACAGCCCTTCTGCAGGCGCATTTCTCCGGCCAATCTAACCATGTTTATAGCCCAAACT
rJMSF049D09+                     CTGCAGGCGCATTTCTCCGGCCAATCCAACCATGTTTATAGCCCATACT
rJMFF040N15+                                 TTCTCCGGCCAATCCAACCATGTTTATAGCCCATACT
                      ____________________________________________________________
consensus             CCACAGCCCTTCTGCAGGCGCATTTCTCCGGCCAATCCAACCATGTTTATAGCCCATACT
 
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rJMSF018I23+          TTCCAGTTAGTCCCTTGCACTGGTTTAATTACACTGGAAATCCTCCCAACAACACTATGG
rJMSF049D09+          TCCCAGTTAGTCCCTTGCACTGGTTTAATTACACTGGAAATCCCCCCAACAACACTATGG
rJMFF040N15+          TCCCAGTTAGTCCCTTGCACTGGTTTAATTACACTGGAAATCCCCCCAACAACACTATGG
                      ____________________________________________________________
consensus             TCCCAGTTAGTCCCTTGCACTGGTTTAATTACACTGGAAATCCCCCCAACAACACTATGG
 
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rJMSF018I23+          TCAGCAATGGAACAAAAGTTATGGTTTTGAATTTTAACACCAGTGTTGAGTTGGTGATGC
rJMSF049D09+          TCAGCAATGGAACAAAAGTTATGGTTTTGAATTATAACACCAGTGTTGAGTTGGTGATGC
rJMFF040N15+          TCAGCAATGGAACAAAAGTTATGGTTTTGAATTATAACACCAGTGTTGAGTTGGTGATGC
                      ____________________________________________________________
consensus             TCAGCAATGGAACAAAAGTTATGGTTTTGAATTATAACACCAGTGTTGAGTTGGTGATGC
 
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rJMSF018I23+          AAGATACCAGCATTCTTGGCGCGGAGAGCCACCCTCTTCATCTTCATGGCTTCAACTTTT
rJMSF049D09+          AAGATACCAGCATTCTTAGCGCGGAGAGCCACCCTCTTCATCTTCACGGCTTCAACTTTT
rJMFF040N15+          AAGATACCAGCATTCTTAGCGCGGAGAGCCACCCTCTTCATCTTCACGGCTTCAACTTTT
                      ____________________________________________________________
consensus             AAGATACCAGCATTCTTAGCGCGGAGAGCCACCCTCTTCATCTTCACGGCTTCAACTTTT
 
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rJMSF018I23+          TCGTGGTTGGACAAGGTTTCGGAAACTTTAACCAAACAAAGGACCCAAAGAATTTTAACC
rJMSF049D09+          TCGTGGTCGGACAAGGTTTCGGAAACTTTGATCGCACAAATGACCCGAAGAATTTTAACC
rJMFF040N15+          TCGTGGTCGGACAAGGTTTCGGAAACTTTGATCGCACAAATGACCCGAAGAATTTTAACC
                      ____________________________________________________________
consensus             TCGTGGTCGGACAAGGTTTCGGAAACTTTGATCGCACAAATGACCCGAAGAATTTTAACC
 
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rJMSF018I23+          TTGTTGATCCTGTTGAAAGAAACACTGTGGGTGTCCCCGCTGGTGGTTGGGTAGCTATTC
rJMSF049D09+          TTGTTGATCCCGTTGAAAGAAACACCATTGGTGTCCCCCCTGGTGGTTGGGTAGCTATTC
rJMFF040N15+          TTGTTGATCCCGTTGAAAGAAACACCATTGGTGTCCCCCCTGGTGGTTGGGTAGCTATTC
                      ____________________________________________________________
consensus             TTGTTGATCCCGTTGAAAGAAACACCATTGGTGTCCCCCCTGGTGGTTGGGTAGCTATTC
 
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rJMSF018I23+          GATTCTTGGCTGATAATCCAGGTGTGTGGTTCATGCATTGCCACTTGGAAGTGCATACAA
rJMSF049D09+          GATTCTTGGCTGATAACCCAGGTGTGTGGTTCATGCATTGCCACTTGGAAGTGCATACAA
rJMFF040N15+          GATTCTTGGCTGATAACCCAGGTGTGTGGTTCATGCATTGCCACTTGGAAGTGCATACAA
                      ____________________________________________________________
consensus             GATTCTTGGCTGATAACCCAGGTGTGTGGTTCATGCATTGCCACTTGGAAGTGCATACAA
 
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rJMSF018I23+          GCTGGGGTTTGAAGATGGCATGGCTTGTATTGGATGGAAAGCTTCCCAACCAAAAGCTCC
rJMSF049D09+          GCTGGGGTTTGAAGATGGCATGGCTTGTATTGGATGGAAAACTTCCCAACCAGAAGCTCC
rJMFF040N15+          GCTGGGGTTTGAAGATGGCATGGCTTGTATTGGATGGAAAACTTCCCAACCAGAAGCTCC
                      ____________________________________________________________
consensus             GCTGGGGTTTGAAGATGGCATGGCTTGTATTGGATGGAAAACTTCCCAACCAGAAGCTCC
 
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rJMSF018I23+          TTCCTCCTCCCTCTGATCTACCAAAATG                                
rJMSF049D09+          TTCCTCCTCCATCTGATCTACCAAAATGCTGATCAGATCACTTTAATTTGCAGCATTGTT
rJMFF040N15+          TTCCTCCTCCATCTGATCTACCAAAATGCTGATCAGATCACTTTAATTTGCAGCATTGTT
                      ____________________________________________________________
consensus             TTCCTCCTCCATCTGATCTACCAAAATGCTGATCAGATCACTTTAATTTGCAGCATTGTT
 
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rJMSF049D09+          ATTAATGGAGTATTCTTAATTAATTTCTTTGCAGATATATGAGTTTTATTTCATTCTCTC
rJMFF040N15+          ATTAATGGAGTATTCTTAATTAATTTCTTTGCAGATATATGAGTTTTATTTCATTCTCTC
                      ____________________________________________________________
consensus             ATTAATGGAGTATTCTTAATTAATTTCTTTGCAGATATATGAGTTTTATTTCATTCTCTC
 
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rJMSF049D09+          CGGACGACGACCCTGCAGTTTCATTCCTGTTTTAATTTGTTTTTTTAGTTATTATTATTA
rJMFF040N15+          CGGACGACGACCCTGCAGTTTCATTCCTGTTTTAATTTGTTTTTTTAGTTATTATTATTA
                      ____________________________________________________________
consensus             CGGACGACGACCCTGCAGTTTCATTCCTGTTTTAATTTGTTTTTTTAGTTATTATTATTA
 
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rJMSF049D09+          TATTATTTTTTGTAATAGCTGACTCACCTATAATTTTCAACCACATCAACTCCTGTATTG
rJMFF040N15+          TATTATTTTTTGTAATAGCTGACTCACCTATAATTTTCAACCACATCAGCTCCTGTATTG
                      ____________________________________________________________
consensus             TATTATTTTTTGTAATAGCTGACTCACCTATAATTTTCAACCACATCAGCTCCTGTATTG
 
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rJMSF049D09+          ACCGTGTTTGTAATGTTGGTTATTAATTAAT                             
rJMFF040N15+          ACCGTGTTTGTAATGTTGGTTATTAATTAATTGAATAATGTTTAATAATGCAAACGAGTA
                      ____________________________________________________________
consensus             ACCGTGTTTGTAATGTTGGTTATTAATTAATTGAATAATGTTTAATAATGCAAACGAGTA