Contig 012396:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025K02Sequence517008848 (4)ref|XP_004232295.1|5e-54PREDICTED: protease Do-like 1, chloroplastic [Solanum lycopersicum]696012396 (4)ref|XP_010243027.1|1e-68PREDICTED: protease Do-like 1, chloroplastic isoform X1 [Nelumbo nucifera]
JMFF040K10Sequence556008848 (4)ref|XP_004232295.1|8e-51PREDICTED: protease Do-like 1, chloroplastic [Solanum lycopersicum]779012396 (4)gb|ACZ74706.1|4e-98serine-type peptidase [Phaseolus vulgaris]
JMSF044O22Sequence773008848 (4)ref|XP_004232295.1|2e-108PREDICTED: protease Do-like 1, chloroplastic [Solanum lycopersicum]666012396 (4)ref|XP_009614636.1|3e-115PREDICTED: protease Do-like 1, chloroplastic [Nicotiana tomentosiformis]
JMSF050D23Sequence654008848 (4)ref|XP_004232295.1|6e-79PREDICTED: protease Do-like 1, chloroplastic [Solanum lycopersicum]683012396 (4)ref|XP_010243027.1|1e-68PREDICTED: protease Do-like 1, chloroplastic isoform X1 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF044O22+ ATCATACACTCACCACTGGTGTCATCAGTGGACTCAGA
                      ____________________________________________________________
consensus ATCATACACTCACCACTGGTGTCATCAGTGGACTCAGA
 
. : . : . : . : . : . :
rJMSF044O22+ AGAGAAAATCAATTCTGCTGCAACTGGCCGCCCAATACAGGATGTTATCCAGACAGATGC
                      ____________________________________________________________
consensus AGAGAAAATCAATTCTGCTGCAACTGGCCGCCCAATACAGGATGTTATCCAGACAGATGC
 
. : . : . : . : . : . :
rJMSF044O22+ TGCTATAAACCCAGGGAATAGTGGAGGGCCACTTCTTGATAGTTCAGGAAACCTTATTGG
                      ____________________________________________________________
consensus TGCTATAAACCCAGGGAATAGTGGAGGGCCACTTCTTGATAGTTCAGGAAACCTTATTGG
 
. : . : . : . : . : . :
rJMSF044O22+ AATAAACACAGCTATATACTCCCCTTCAGGTGCATCATCAGGTGTTGGATTTTCTATTCC
                      ____________________________________________________________
consensus AATAAACACAGCTATATACTCCCCTTCAGGTGCATCATCAGGTGTTGGATTTTCTATTCC
 
. : . : . : . : . : . :
rJMSF044O22+ AGTTGACACAGTAAGTGGCATTGTTGATCAGTTGGTAAAGTTTGGGAAAGTCACCAGACC
rJMSF050D23+ GTAAGTGGCATTGTTGATCAGTTGGTAAAGTTTGGGAAAGTCACCAGACC
rJMFF025K02+ GTAAGTGGCATTGTTGATCAGTTGGTAAAGTTTGGGAAAGTCACCAGACC
rJMFF040K10+ GTAAGTGGCATTGTTGATCAGTTGGTAAAGTTTGGGAAAGTCACCAGACC
                      ____________________________________________________________
consensus AGTTGACACAGTAAGTGGCATTGTTGATCAGTTGGTAAAGTTTGGGAAAGTCACCAGACC
 
. : . : . : . : . : . :
rJMSF044O22+ AATTCTGGGAATTAAATTTGCCCCAGATCAGTCTGTAGAGCAACTTGGAGTTAGTGGGGT
rJMSF050D23+ AATTCTGGGAATTAAATTTGCCCCAGATCAGTCTGTAGAGCAACTTGGAGTTAGTGGGGT
rJMFF025K02+ AATTCTGGGAATTAAATTTGCCCCAGATCAGTCTGTAGAGCAACTTGGAGTTAGTGGGGT
rJMFF040K10+ AATTCTGGGAATTAAATTTGCCCCAGATCAGTCTGTAGAGCAACTTGGAGTTAGTGGGGT
                      ____________________________________________________________
consensus AATTCTGGGAATTAAATTTGCCCCAGATCAGTCTGTAGAGCAACTTGGAGTTAGTGGGGT
 
. : . : . : . : . : . :
rJMSF044O22+ GCTTGTCTTGGATGCTCCTCCAAATGGTCCAGCTGGGAAAGCAGGGCTTCAATCTACTAA
rJMSF050D23+ GCTTGTCTTGGATGCTCCTCCAAATGGTCCAGCTGGGAAAGCAGGGCTTCAATCTACTAA
rJMFF025K02+ GCTTGTCTTGGATGCTCCTCCAAATGGTCCAGCTGGGAAAGCAGGGCTTCAATCTACTAA
rJMFF040K10+ GCTTGTCTTGGATGCTCCTCCAAATGGTCCAGCTGGGAAAGCAGGGCTTCAATCTACTAA
                      ____________________________________________________________
consensus GCTTGTCTTGGATGCTCCTCCAAATGGTCCAGCTGGGAAAGCAGGGCTTCAATCTACTAA
 
. : . : . : . : . : . :
rJMSF044O22+ GCGCGATTCCTATGGCAGACTTGTTTTGGGTGATATCATTACTTCTGTAAATGGTAAAAA
rJMSF050D23+ GCGCGATTCCTATGGCAGACTTGTTTTGGGTGATATCATTACTTCTGTAAATGGTAAAAA
rJMFF025K02+ GCGCGATTCCTATGGCAGACTTGTTTTGGGTGATATCATTACTTCTGTAAATGGTAAAAA
rJMFF040K10+ GCGCGATTCCTATGGCAGACTTGTTTTGGGTGATATCATTACTTCTGTAAATGGTAAAAA
                      ____________________________________________________________
consensus GCGCGATTCCTATGGCAGACTTGTTTTGGGTGATATCATTACTTCTGTAAATGGTAAAAA
 
. : . : . : . : . : . :
rJMSF044O22+ AGTCTCTAATGGCACTGATTTGTACAGAATTCTTGACCAATGCAAAGTGGGTGAAAAGGT
rJMSF050D23+ AGTCTCTAATGGCACTGATTTGTACAGAATTCTTGACCAATGCAAAGTGGGTGAAAAGGT
rJMFF025K02+ AGTCTCTAATGGCACTGATTTGTACAGAATTCTTGACCAATGCAAAGTGGGTGAAAAGGT
rJMFF040K10+ AGTCTCTAATGGCACTGATTTGTACAGAATTCTTGACCAATGCAAAGTGGGTGAAAAGGT
                      ____________________________________________________________
consensus AGTCTCTAATGGCACTGATTTGTACAGAATTCTTGACCAATGCAAAGTGGGTGAAAAGGT
 
. : . : . : . : . : . :
rJMSF044O22+ GATTGTGGAAGTCTTGCGTGGTGACAAAAAGGAAAAGATTCCTGTAATCCTGGAACCAAA
rJMSF050D23+ GATTGTGGAAGTCTTGCGTGGTGACAAAAAGGAAAAGATTCCTGTAATCCTGGAACCAAA
rJMFF025K02+ GATTGTGGAAGTCTTGCGTGGTGACAAAAAGGAAAAGATTCCTGTAATCCTGGAACCAAA
rJMFF040K10+ GATTGTGGAAGTCTTGCGTGGTGACAAAAAGGAAAAGATTCCTGTAATCCTGGAACCAAA
                      ____________________________________________________________
consensus GATTGTGGAAGTCTTGCGTGGTGACAAAAAGGAAAAGATTCCTGTAATCCTGGAACCAAA
 
. : . : . : . : . : . :
rJMSF044O22+ GCCTGATGAATCATAAGAGGTTAGGAGGCTGAATTGGATGAGTAACGTTAAACTTGCTGT
rJMSF050D23+ GCCTGATGAATCATAAGAGGTTAGGAGGCTGAATTGGATGAGTAACGTTAAACTTGCTGT
rJMFF025K02+ GCCTGATGAATCATAAGAGGTTAGGAGGCTGAATTGGATGAGTAACGTTAAACTTGCTGT
rJMFF040K10+ GCCTGATGAATCATAAGAGGTTAGGAGGCTGAATTGGATGAGTAACGTTAAACTTGCTGT
                      ____________________________________________________________
consensus GCCTGATGAATCATAAGAGGTTAGGAGGCTGAATTGGATGAGTAACGTTAAACTTGCTGT
 
. : . : . : . : . : . :
rJMSF044O22+ ATTTATAAAATAAATCTCCCTATACTAA
rJMSF050D23+ ATTTATAAAATAAATCTCCCTATACTAATTGTTTCTTGATATCTAAATTGTGTACATAAA
rJMFF025K02+ ATTTATAAAATAAATCTCCCTATACTAATTGTTTCTTGATATCTAAATTGTGTACAAAAA
rJMFF040K10+ ATTTATAAAATAAATCTCCCTATACTAATTGTTTCTTGATATCTAAATTGTGTACATAAA
                      ____________________________________________________________
consensus ATTTATAAAATAAATCTCCCTATACTAATTGTTTCTTGATATCTAAATTGTGTACATAAA
 
. : . : . : . : . : . :
rJMSF050D23+ AA
rJMFF025K02+ AA
rJMFF040K10+ AAATATACTGTATGGCAACACACTTTCGTTCCGCCCCCTTTACCATCGGACACTGCAGGT
                      ____________________________________________________________
consensus AAATATACTGTATGGCAACACACTTTCGTTCCGCCCCCTTTACCATCGGACACTGCAGGT
 
. : . : . : . : . : . :
rJMFF040K10+ ATATATTTTTCGACCTGATGTCTTCGTTAATATTAATGGGCAAATTTGTAAACCTAACAG
                      ____________________________________________________________
consensus ATATATTTTTCGACCTGATGTCTTCGTTAATATTAATGGGCAAATTTGTAAACCTAACAG