Contig 012365:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF028I16+                           AAAAATCCGACGTTTATTCGTTCGGGGTGGTTTTATTTCGAGG
                      ____________________________________________________________
consensus                              AAAAATCCGACGTTTATTCGTTCGGGGTGGTTTTATTTCGAGG
 
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rJMSF028I16+          TCCTATGCGCGAGGCCGGCCGTGATTCCGACCCAAACGAGAGAGCGAGTGAACTTAGCGG
                      ____________________________________________________________
consensus             TCCTATGCGCGAGGCCGGCCGTGATTCCGACCCAAACGAGAGAGCGAGTGAACTTAGCGG
 
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rJMSF028I16+          AGTGGGCCCGGCAGTGTTGCCGGAAAGGCACGGTGGATCAAATGGTGGATCCCAGATTAC
rJMFF034D14+           GTGGGCCCGGCAGTGTTGCCGGAAAGGCACGGTGGATCAAATGGTGGATCCCAGATTAC
                      ____________________________________________________________
consensus             AGTGGGCCCGGCAGTGTTGCCGGAAAGGCACGGTGGATCAAATGGTGGATCCCAGATTAC
 
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rJMSF028I16+          GCGGCGAGATTGCGCCGGAGTCGCTGAACAAGTACGCCGAGATAGCCTGCAATTGCCTGA
rJMFF034D14+          GCGGCGAGATTGCGCCGGAGTCGCTGAACAAGTACGCCGAGATAGCCTGCAATTGCCTGA
                      ____________________________________________________________
consensus             GCGGCGAGATTGCGCCGGAGTCGCTGAACAAGTACGCCGAGATAGCCTGCAATTGCCTGA
 
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rJMSF028I16+          AGGAACAAGGGGTAGACCGCCCCGCGATGAGCGATGTGGTTTGGAGCCTTGAATTCGCGT
rJMFF034D14+          AGGAACAAGGGGTAGACCGCCCCGCGATGAGCGATGTGGTTTGGAGCCTTGAATTCGCGT
                      ____________________________________________________________
consensus             AGGAACAAGGGGTAGACCGCCCCGCGATGAGCGATGTGGTTTGGAGCCTTGAATTCGCGT
 
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rJMSF028I16+          TGCAGCTCCAGGAAGCCGCCGAGAAGAGGACCCAAGCGGCCGCCGGCGACGACGGGTTCC
rJMFF034D14+          TGCAGCTCCAGGAAGCCGCCGAGAAGAGGACCCAAGCGGCCGCCGGCGACGACGGGTTCC
                      ____________________________________________________________
consensus             TGCAGCTCCAGGAAGCCGCCGAGAAGAGGACCCAAGCGGCCGCCGGCGACGACGGGTTCC
 
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rJMSF028I16+          CGCCCGGCAGCCCATCTTTCCCGNTGCTAGGAAACGGAGACTCAAACACCACCACCGACA
rJMFF034D14+          CGCCCGGCAGCCCATCTTTCCCGCTGCTAGGAAACGGAGACTCAAACACCACCACCGACA
                      ____________________________________________________________
consensus             CGCCCGGCAGCCCATCTTTCCCGCTGCTAGGAAACGGAGACTCAAACACCACCACCGACA
 
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rJMSF028I16+          GCAGCGAAGGCGGCGTTTTCTCGACGTCCGATGAAGTTGCGGCAATGTCGTCTACAACCA
rJMFF034D14+          GCAGCGAAGGCGGCGTTTTCTCGACGTCCGATGAAGTTGCGGCAATGTCGTCTACAACCA
                      ____________________________________________________________
consensus             GCAGCGAAGGCGGCGTTTTCTCGACGTCCGATGAAGTTGCGGCAATGTCGTCTACAACCA
 
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rJMSF028I16+          GTGGGAGTGGGACAGCGACAACCACAACCGGCGTCGACAGGCTACAGTCCCATAATGTTT
rJMFF034D14+          GTGGGAGTGGGACAGCGACAACCACAACCGGCGTCGACAGGCTACAGTCCCATAATGTTT
                      ____________________________________________________________
consensus             GTGGGAGTGGGACAGCGACAACCACAACCGGCGTCGACAGGCTACAGTCCCATAATGTTT
 
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rJMSF028I16+          TTTCCCTACTCAACCACCCTGAGGGACGTTAATTAATATTTTTCTTATCTCTACTCTGAA
rJMFF034D14+          TTTCCCTACTCAACCACCCTGAGGGACGTTAATTAATATTTTTCTTATCTCTACTCTGAA
                      ____________________________________________________________
consensus             TTTCCCTACTCAACCACCCTGAGGGACGTTAATTAATATTTTTCTTATCTCTACTCTGAA
 
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rJMSF028I16+          TTCAAATTTCTAGTTGCCGTAGCCCATAGGCATTGATCATTGATGAATGATGAGAGCAGA
rJMFF034D14+          TTCAAATTTCTAGTTGCCGTAGCCCATAGGCATTGATCATTGATGAATGATGAGAGCAGA
                      ____________________________________________________________
consensus             TTCAAATTTCTAGTTGCCGTAGCCCATAGGCATTGATCATTGATGAATGATGAGAGCAGA
 
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rJMSF028I16+          AACAGACAAAGCTTGGGGTCCATTTTCTATTCTCTGTTTTCCTTAATAGATAACTAGGTG
rJMFF034D14+          AACAGACAAAGCTTGGGGTCCATTTTCTATTCTCTGTTTTCCTTAATAGATAACTAGGTG
                      ____________________________________________________________
consensus             AACAGACAAAGCTTGGGGTCCATTTTCTATTCTCTGTTTTCCTTAATAGATAACTAGGTG
 
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rJMSF028I16+          GGTGTATAAGTATTGAAATTTCAGTTATAAGGGTTACAATATATGTT             
rJMFF034D14+          GGTGTATAAGTATTGAAATTTCAGTTATAAGGGTTACAATATATGTTTGTTAATAGTAAT
                      ____________________________________________________________
consensus             GGTGTATAAGTATTGAAATTTCAGTTATAAGGGTTACAATATATGTTTGTTAATAGTAAT
 
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rJMFF034D14+          GATTTCACATGCAAATATTACAACATATATCATAAGTAACAATTTATTTTTTATTCATAT
                      ____________________________________________________________
consensus             GATTTCACATGCAAATATTACAACATATATCATAAGTAACAATTTATTTTTTATTCATAT