Contig 012360:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF033G07-                                                           ATAATGAACCGA
                      ____________________________________________________________
consensus                                                             ATAATGAACCGA
 
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JMFF033G07-           TAAGAGAAATCAAGAGGACAGAAGCGATGGGAGGAGACTTCCCTTCGAAGCCGATGTCTT
rJMFF008P17+                                                       CGAAGCCGATGTCTT
rJMFF033G07+                                                                     T
                      ____________________________________________________________
consensus             TAAGAGAAATCAAGAGGACAGAAGCGATGGGAGGAGACTTCCCTTCGAAGCCGATGTCTT
 
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JMFF033G07-           TGTATGCCACGATATGGGATGGATCGGGGTGGGCAACAGCGGGGGGAAAGTACAAAGTGA
rJMFF008P17+          TGTATGCCACGATATGGGATGGATCGGGGTGGGCAACAGCGGGGGGAAAGTACAAAGTGA
rJMFF033G07+          TGTATGCCACGATATGGGATGGATCGGGGTGGGCAACAGCGGGGGGAAAGTACAAAGTGA
                      ____________________________________________________________
consensus             TGTATGCCACGATATGGGATGGATCGGGGTGGGCAACAGCGGGGGGAAAGTACAAAGTGA
 
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JMFF033G07-           ATTACAAATATGCTCCCTTCGTCGCAGAGCTCTCCGAGTTTGTCCTCCACGGCTGTGCAG
rJMFF008P17+          ATTACAAATATGCTCCCTTCGTCGCAGAGCTCTCCGAGTTTGTCCTCCACGGCTGTGCAG
rJMFF033G07+          ATTACAAATATGCTCCCTTCGTCGCAGAGCTCTCCGAGTTTGTCCTCCACGGCTGTGCAG
                      ____________________________________________________________
consensus             ATTACAAATATGCTCCCTTCGTCGCAGAGCTCTCCGAGTTTGTCCTCCACGGCTGTGCAG
 
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JMFF033G07-           TCGATCCTATTGAGCTGTCATCGGATAAGTGCGAAACCGCCCCGGAAATGGCCTCGATCC
rJMFF008P17+          TCGATCCTATTGAGCTGTCATCGGATAAGTGCGAAACCGCCCCGGAAATGGCCTCGATCC
rJMFF033G07+          TCGATCCTATTGAGCTGTCATCGGATAAGTGCGAAACCGCCCCGGAAATGGCCTCGATCC
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consensus             TCGATCCTATTGAGCTGTCATCGGATAAGTGCGAAACCGCCCCGGAAATGGCCTCGATCC
 
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JMFF033G07-           CAACCGGGATCACACCCGAGCAAAGGACTAAAATGGCGAGGTTCAGGAGGAAGAACATTC
rJMFF008P17+          CAACCGGGATCACACCCGAGCAAAGGACTAAAATGGCGAGGTTCAGGAGGAAGAACATTC
rJMFF033G07+          CAACCGGGATCACACCCGAGCAAAGGACTAAAATGGCGAGGTTCAGGAGGAAGAACATTC
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consensus             CAACCGGGATCACACCCGAGCAAAGGACTAAAATGGCGAGGTTCAGGAGGAAGAACATTC
 
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JMFF033G07-           AGTACTCTTATTGCTATGATAGCGCCCGATACAAGGTCCCTTCAACCGAATGTGCCCTCG
rJMFF008P17+          AGTACTCTTATTGCTATGATAGCGCCCGATACAAGGTCCCTTCAACCGAATGTGCCCTCG
rJMFF033G07+          AGTACTCTTATTGCTATGATAGCGCCCGATACAAGGTCCCTTCAACCGAATGTGCCCTCG
                      ____________________________________________________________
consensus             AGTACTCTTATTGCTATGATAGCGCCCGATACAAGGTCCCTTCAACCGAATGTGCCCTCG
 
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JMFF033G07-           ATGCTAAAGAGGCCGAGCAGCTCCGGAGATTCGACCCCGTGAGGTTTGGCGGCGTCCCCC
rJMFF008P17+          ATGCTAAAGAGGCCGAGCAGCTCCGGAGATTCGACCCCGTGAGGTTTGGCGGCGTCCCCC
rJMFF033G07+          ATGCTAAAGAGGCCGAGCAGCTCCGGAGATTCGACCCCGTGAGGTTTGGCGGCGTCCCCC
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consensus             ATGCTAAAGAGGCCGAGCAGCTCCGGAGATTCGACCCCGTGAGGTTTGGCGGCGTCCCCC
 
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JMFF033G07-           GCCACCGTGGCAGACGACACCGCCGAGGAGGCGGGAGAAGTAGTAGGGATGGATCCTCCT
rJMFF008P17+          GCCACCGTGGCAGACGACACCGCCGAGGAGGCGGGAGAAGTAGTAGGGATGGATCCTCCT
rJMFF033G07+          GCCACCGTGGCAGACGACACCGCCGAGGAGGCGGGAGAAGTAGTAGGGATGGATCCTCCT
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consensus             GCCACCGTGGCAGACGACACCGCCGAGGAGGCGGGAGAAGTAGTAGGGATGGATCCTCCT
 
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JMFF033G07-           CCTCCACTTGAGAAGGCTAAGGTTTCATTTATTGTGATTTAAGGTTGTTGTTCACCTACC
rJMFF008P17+          CCTCCACTTGAGAAGGCTAAGGTTTCATTTATTGTGATTTAAGGTTGTTGTTCACCTACC
rJMFF033G07+          CCTCCACTTGAGAAGGCTAAGGTTTCATTTATTGTGATTTAAGGTTGTTGTTCACCTACC
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consensus             CCTCCACTTGAGAAGGCTAAGGTTTCATTTATTGTGATTTAAGGTTGTTGTTCACCTACC
 
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JMFF033G07-           TACCTACCTGTGAATAGTGGATACA                                   
rJMFF008P17+          TACCTACCTGTGAATAGTGGATACAGGAGATGAGAGGGGAGAGGGTGGTCATTTGGGAGG
rJMFF033G07+          TACCTACCTGTGAATAGTGGATACAGGAGATGAGAGGGGAGAGGGTGGTCATTTGGGAGG
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consensus             TACCTACCTGTGAATAGTGGATACAGGAGATGAGAGGGGAGAGGGTGGTCATTTGGGAGG
 
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rJMFF008P17+          GCAAAAGGAATTTTGAGTGTAGTATTGATTGGTGATGAATGGGAAGGGGAGGGGGTGGGG
rJMFF033G07+          GCAAAAGGAATTTTGAGTGTAGTATTGATTGGTGATGAATGGGAAGGGGAGGGGGTGGGG
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consensus             GCAAAAGGAATTTTGAGTGTAGTATTGATTGGTGATGAATGGGAAGGGGAGGGGGTGGGG
 
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rJMFF008P17+          TGGGGGTGAGATATGTGTATTTATTTTATACTTATAGTGTCATCTTAGCCATGTTCTCTC
rJMFF033G07+          TGGGGGTGAGATATGTGTATTTATTTTATACTTATAGTGTCATCTTAGCCATGTTCTCTC
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consensus             TGGGGGTGAGATATGTGTATTTATTTTATACTTATAGTGTCATCTTAGCCATGTTCTCTC
 
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rJMFF008P17+          ATTCATCTTGGGCTTTATATATTTATCATCATGTATTTGCTACTCTTCAATAA       
rJMFF033G07+          ATTCATCTTGGGCTTTATATATTTATCATCATGTATTTGCTACTCTTCAATAAGTATATA
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consensus             ATTCATCTTGGGCTTTATATATTTATCATCATGTATTTGCTACTCTTCAATAAGTATATA